RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 BBOX1O75936 387 aa17.28■□□□□ 0.36
ATPAF2-208ENST00000496852 SASH1O94885 1247 aa17.28■□□□□ 0.36
ATPAF2-208ENST00000496852 IL15P40933 162 aaPredicted RBP17.28■□□□□ 0.36
ATPAF2-208ENST00000496852 CNNM1Q9NRU3 951 aa17.28■□□□□ 0.36
ATPAF2-208ENST00000496852 PPP1R1BQ9UD71 204 aaPredicted RBP17.28■□□□□ 0.36
ATPAF2-208ENST00000496852 ERC1Q8IUD2 1116 aa17.27■□□□□ 0.36
ATPAF2-208ENST00000496852 KLHL34Q8N239 644 aa17.27■□□□□ 0.36
ATPAF2-208ENST00000496852 CNKSR1Q969H4 720 aa17.27■□□□□ 0.36
ATPAF2-208ENST00000496852 OS9Q13438 667 aaPredicted RBP17.26■□□□□ 0.35
ATPAF2-208ENST00000496852 RHPN1Q8TCX5 695 aa17.26■□□□□ 0.35
ATPAF2-208ENST00000496852 FER1L6Q2WGJ9 1857 aa17.26■□□□□ 0.35
ATPAF2-208ENST00000496852 APBB1O00213 710 aa17.26■□□□□ 0.35
ATPAF2-208ENST00000496852 PPEF1O14829 653 aaPredicted RBP17.26■□□□□ 0.35
ATPAF2-208ENST00000496852 TMC4Q7Z404 712 aa17.26■□□□□ 0.35
ATPAF2-208ENST00000496852 KIF1BPQ96EK5 621 aa17.26■□□□□ 0.35
ATPAF2-208ENST00000496852 FHDC1Q9C0D6 1143 aaPredicted RBP17.26■□□□□ 0.35
ATPAF2-208ENST00000496852 MINPP1Q9UNW1 487 aa17.26■□□□□ 0.35
ATPAF2-208ENST00000496852 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.26■□□□□ 0.35
ATPAF2-208ENST00000496852 MROH5Q6ZUA9 1318 aa17.25■□□□□ 0.35
ATPAF2-208ENST00000496852 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
ATPAF2-208ENST00000496852 SLC51AQ86UW1 340 aa17.25■□□□□ 0.35
ATPAF2-208ENST00000496852 VGLL2Q8N8G2 317 aa17.25■□□□□ 0.35
ATPAF2-208ENST00000496852 NLGN2Q8NFZ4 835 aa17.25■□□□□ 0.35
ATPAF2-208ENST00000496852 LRRCC1Q9C099 1032 aa17.25■□□□□ 0.35
ATPAF2-208ENST00000496852 MYH13Q9UKX3 1938 aa17.25■□□□□ 0.35
ATPAF2-208ENST00000496852 CHRNDQ07001 517 aa17.24■□□□□ 0.35
ATPAF2-208ENST00000496852 TFCP2Q12800 502 aa17.24■□□□□ 0.35
ATPAF2-208ENST00000496852 TTLL6Q8N841 843 aa17.24■□□□□ 0.35
ATPAF2-208ENST00000496852 ATP6V0A2Q9Y487 856 aa17.24■□□□□ 0.35
ATPAF2-208ENST00000496852 DUOX1Q9NRD9 1551 aa17.24■□□□□ 0.35
ATPAF2-208ENST00000496852 NUCB1Q02818 461 aa17.23■□□□□ 0.35
ATPAF2-208ENST00000496852 METTL24Q5JXM2 366 aa17.23■□□□□ 0.35
ATPAF2-208ENST00000496852 ANKRD45Q5TZF3 282 aa17.23■□□□□ 0.35
ATPAF2-208ENST00000496852 SP8Q8IXZ3 490 aa17.23■□□□□ 0.35
ATPAF2-208ENST00000496852 PIM2Q9P1W9 311 aa17.23■□□□□ 0.35
ATPAF2-208ENST00000496852 CEP126Q9P2H0 1117 aa17.23■□□□□ 0.35
ATPAF2-208ENST00000496852 CCDC88AQ3V6T2 1871 aa17.23■□□□□ 0.35
ATPAF2-208ENST00000496852 SMARCA5O60264 1052 aaPredicted RBP17.23■□□□□ 0.35
ATPAF2-208ENST00000496852 PDE8BO95263 885 aa17.23■□□□□ 0.35
ATPAF2-208ENST00000496852 C7orf43Q8WVR3 580 aa17.23■□□□□ 0.35
ATPAF2-208ENST00000496852 IL1RAPL2Q9NP60 686 aa17.23■□□□□ 0.35
ATPAF2-208ENST00000496852 ZNF609O15014 1411 aa17.22■□□□□ 0.35
ATPAF2-208ENST00000496852 SNED1Q8TER0 1413 aa17.22■□□□□ 0.35
ATPAF2-208ENST00000496852 HELBQ8NG08 1087 aaPredicted RBP17.22■□□□□ 0.35
ATPAF2-208ENST00000496852 SYT17Q9BSW7 474 aa17.22■□□□□ 0.35
ATPAF2-208ENST00000496852 GPR108Q9NPR9 543 aa17.22■□□□□ 0.35
ATPAF2-208ENST00000496852 TAF5LO75529 589 aa17.21■□□□□ 0.35
ATPAF2-208ENST00000496852 CHD1LQ86WJ1 897 aa17.21■□□□□ 0.35
ATPAF2-208ENST00000496852 ANKRD2Q9GZV1 360 aa17.21■□□□□ 0.35
ATPAF2-208ENST00000496852 OLFM4Q6UX06 510 aa17.2■□□□□ 0.34
ATPAF2-208ENST00000496852 XDHP47989 1333 aa17.2■□□□□ 0.34
ATPAF2-208ENST00000496852 AKAP11Q9UKA4 1901 aa17.2■□□□□ 0.34
ATPAF2-208ENST00000496852 FGFR2P21802 821 aa17.2■□□□□ 0.34
ATPAF2-208ENST00000496852 GPSM2P81274 684 aa17.2■□□□□ 0.34
ATPAF2-208ENST00000496852 TNNI3KQ59H18 835 aa17.2■□□□□ 0.34
ATPAF2-208ENST00000496852 CLASRPQ8N2M8 674 aaKnown RBP17.2■□□□□ 0.34
ATPAF2-208ENST00000496852 EAF2Q96CJ1 260 aaPredicted RBP17.2■□□□□ 0.34
ATPAF2-208ENST00000496852 LNPKQ9C0E8 428 aa17.2■□□□□ 0.34
ATPAF2-208ENST00000496852 PODXL2Q9NZ53 605 aa17.2■□□□□ 0.34
ATPAF2-208ENST00000496852 FPGT-TNNI3KV9GXZ4 949 aa17.2■□□□□ 0.34
ATPAF2-208ENST00000496852 CHD4Q14839 1912 aa17.19■□□□□ 0.34
ATPAF2-208ENST00000496852 DALRD3Q5D0E6 543 aaKnown RBP17.19■□□□□ 0.34
ATPAF2-208ENST00000496852 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
ATPAF2-208ENST00000496852 AKAP2Q9Y2D5 859 aa17.19■□□□□ 0.34
ATPAF2-208ENST00000496852 AK9Q5TCS8 1911 aa17.19■□□□□ 0.34
ATPAF2-208ENST00000496852 A0A1B0GUL7 405 aa17.18■□□□□ 0.34
ATPAF2-208ENST00000496852 PUM3Q15397 648 aaKnown RBP17.18■□□□□ 0.34
ATPAF2-208ENST00000496852 ATP2B3Q16720 1220 aa17.18■□□□□ 0.34
ATPAF2-208ENST00000496852 CC2D2BQ6DHV5 1058 aa17.18■□□□□ 0.34
ATPAF2-208ENST00000496852 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
ATPAF2-208ENST00000496852 NSFL1CQ9UNZ2 370 aaKnown RBP17.18■□□□□ 0.34
ATPAF2-208ENST00000496852 SBF1O95248 1867 aa17.18■□□□□ 0.34
ATPAF2-208ENST00000496852 WTIPA6NIX2 430 aaPredicted RBP17.17■□□□□ 0.34
ATPAF2-208ENST00000496852 SNAP23O00161 211 aa17.17■□□□□ 0.34
ATPAF2-208ENST00000496852 C21orf2O43822 256 aa17.17■□□□□ 0.34
ATPAF2-208ENST00000496852 UBE4AQ14139 1066 aa17.17■□□□□ 0.34
ATPAF2-208ENST00000496852 C16orf71Q8IYS4 520 aaPredicted RBP17.17■□□□□ 0.34
ATPAF2-208ENST00000496852 ANKIB1Q9P2G1 1089 aa17.17■□□□□ 0.34
ATPAF2-208ENST00000496852 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
ATPAF2-208ENST00000496852 WWC3Q9ULE0 1092 aa17.17■□□□□ 0.34
ATPAF2-208ENST00000496852 DICER1Q9UPY3 1922 aaKnown RBP17.17■□□□□ 0.34
ATPAF2-208ENST00000496852 PDE4AP27815 886 aa17.16■□□□□ 0.34
ATPAF2-208ENST00000496852 TIMM10P62072 90 aa17.16■□□□□ 0.34
ATPAF2-208ENST00000496852 AACSQ86V21 672 aa17.16■□□□□ 0.34
ATPAF2-208ENST00000496852 MPNDQ8N594 471 aa17.16■□□□□ 0.34
ATPAF2-208ENST00000496852 LPIN2Q92539 896 aa17.16■□□□□ 0.34
ATPAF2-208ENST00000496852 TMX4Q9H1E5 349 aaPredicted RBP17.16■□□□□ 0.34
ATPAF2-208ENST00000496852 LEMD3Q9Y2U8 911 aa17.16■□□□□ 0.34
ATPAF2-208ENST00000496852 ZNF804BA4D1E1 1349 aa17.16■□□□□ 0.34
ATPAF2-208ENST00000496852 SALL3Q9BXA9 1300 aa17.16■□□□□ 0.34
ATPAF2-208ENST00000496852 ATP2B4P23634 1241 aa17.16■□□□□ 0.34
ATPAF2-208ENST00000496852 CCDC8Q9H0W5 538 aaPredicted RBP17.16■□□□□ 0.34
ATPAF2-208ENST00000496852 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
ATPAF2-208ENST00000496852 IRS2Q9Y4H2 1338 aa17.15■□□□□ 0.34
ATPAF2-208ENST00000496852 PSME4Q14997 1843 aa17.15■□□□□ 0.34
ATPAF2-208ENST00000496852 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
ATPAF2-208ENST00000496852 CCDC93Q567U6 631 aa17.15■□□□□ 0.34
ATPAF2-208ENST00000496852 SOGA3Q5TF21 947 aa17.15■□□□□ 0.34
ATPAF2-208ENST00000496852 TBC1D16Q8TBP0 767 aa17.15■□□□□ 0.34
ATPAF2-208ENST00000496852 OTUD7AQ8TE49 926 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms