RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 TBC1D9Q6ZT07 1266 aa20.66■□□□□ 0.9
LMNA-216ENST00000496738 SF3B3Q15393 1217 aaKnown RBP20.65■□□□□ 0.9
LMNA-216ENST00000496738 FLAD1Q8NFF5 587 aa20.65■□□□□ 0.9
LMNA-216ENST00000496738 HELBQ8NG08 1087 aaPredicted RBP20.65■□□□□ 0.9
LMNA-216ENST00000496738 MPHOSPH8Q99549 860 aa20.65■□□□□ 0.9
LMNA-216ENST00000496738 FBXO3Q9UK99 471 aa20.65■□□□□ 0.9
LMNA-216ENST00000496738 ZNF609O15014 1411 aa20.65■□□□□ 0.9
LMNA-216ENST00000496738 POLRMTO00411 1230 aaKnown RBP20.65■□□□□ 0.9
LMNA-216ENST00000496738 CDC45O75419 566 aa20.65■□□□□ 0.9
LMNA-216ENST00000496738 RTL9Q8NET4 1388 aa20.64■□□□□ 0.9
LMNA-216ENST00000496738 A0A1B0GUL7 405 aa20.64■□□□□ 0.89
LMNA-216ENST00000496738 IGHMBP2P38935 993 aaKnown RBP20.64■□□□□ 0.89
LMNA-216ENST00000496738 MFAP1P55081 439 aaKnown RBP20.64■□□□□ 0.89
LMNA-216ENST00000496738 ERC2O15083 957 aa20.63■□□□□ 0.89
LMNA-216ENST00000496738 GLRX3O76003 335 aaKnown RBP20.63■□□□□ 0.89
LMNA-216ENST00000496738 BOLA2Q9H3K6 86 aa20.63■□□□□ 0.89
LMNA-216ENST00000496738 NLGN1Q8N2Q7 840 aa20.62■□□□□ 0.89
LMNA-216ENST00000496738 CELF1Q92879 486 aaKnown RBP20.62■□□□□ 0.89
LMNA-216ENST00000496738 CDC5LQ99459 802 aaKnown RBP20.62■□□□□ 0.89
LMNA-216ENST00000496738 GPR108Q9NPR9 543 aa20.62■□□□□ 0.89
LMNA-216ENST00000496738 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.62■□□□□ 0.89
LMNA-216ENST00000496738 ADORA1P30542 326 aa20.62■□□□□ 0.89
LMNA-216ENST00000496738 ST5P78524 1137 aa20.62■□□□□ 0.89
LMNA-216ENST00000496738 TAF5LO75529 589 aa20.61■□□□□ 0.89
LMNA-216ENST00000496738 ANKRD18AQ8IVF6 992 aa20.61■□□□□ 0.89
LMNA-216ENST00000496738 NDUFB9Q9Y6M9 179 aa20.61■□□□□ 0.89
LMNA-216ENST00000496738 VGLL2Q8N8G2 317 aa20.61■□□□□ 0.89
LMNA-216ENST00000496738 PDGFDQ9GZP0 370 aaPredicted RBP20.61■□□□□ 0.89
LMNA-216ENST00000496738 MMP10P09238 476 aa20.6■□□□□ 0.89
LMNA-216ENST00000496738 ATP2B3Q16720 1220 aa20.6■□□□□ 0.89
LMNA-216ENST00000496738 AKAP2Q9Y2D5 859 aa20.6■□□□□ 0.89
LMNA-216ENST00000496738 MROH5Q6ZUA9 1318 aa20.6■□□□□ 0.89
LMNA-216ENST00000496738 SNAP23O00161 211 aa20.59■□□□□ 0.89
LMNA-216ENST00000496738 PDE8BO95263 885 aa20.59■□□□□ 0.89
LMNA-216ENST00000496738 XAGE2Q96GT9 111 aa20.58■□□□□ 0.89
LMNA-216ENST00000496738 DDX46Q7L014 1031 aaKnown RBP20.58■□□□□ 0.88
LMNA-216ENST00000496738 CNTROBQ8N137 903 aa20.58■□□□□ 0.88
LMNA-216ENST00000496738 EDC3Q96F86 508 aaKnown RBP20.58■□□□□ 0.88
LMNA-216ENST00000496738 CHRNDQ07001 517 aa20.57■□□□□ 0.88
LMNA-216ENST00000496738 GORABQ5T7V8 394 aa20.57■□□□□ 0.88
LMNA-216ENST00000496738 AK9Q5TCS8 1911 aa20.57■□□□□ 0.88
LMNA-216ENST00000496738 SLC51AQ86UW1 340 aa20.57■□□□□ 0.88
LMNA-216ENST00000496738 DNAJC2Q99543 621 aaKnown RBP20.57■□□□□ 0.88
LMNA-216ENST00000496738 ATP5JP18859 108 aa20.56■□□□□ 0.88
LMNA-216ENST00000496738 CASC1Q6TDU7 716 aa20.56■□□□□ 0.88
LMNA-216ENST00000496738 PARP3Q9Y6F1 533 aa20.56■□□□□ 0.88
LMNA-216ENST00000496738 RPS8P62241 208 aaKnown RBP20.56■□□□□ 0.88
LMNA-216ENST00000496738 PUM3Q15397 648 aaKnown RBP20.55■□□□□ 0.88
LMNA-216ENST00000496738 RPGRQ92834 1020 aaKnown RBP20.55■□□□□ 0.88
LMNA-216ENST00000496738 UPF2Q9HAU5 1272 aaKnown RBP20.55■□□□□ 0.88
LMNA-216ENST00000496738 BSDC1Q9NW68 430 aaPredicted RBP20.55■□□□□ 0.88
LMNA-216ENST00000496738 QSER1Q2KHR3 1735 aa20.54■□□□□ 0.88
LMNA-216ENST00000496738 WTIPA6NIX2 430 aaPredicted RBP20.54■□□□□ 0.88
LMNA-216ENST00000496738 CHMLP26374 656 aa20.54■□□□□ 0.88
LMNA-216ENST00000496738 CCDC125Q86Z20 511 aa20.54■□□□□ 0.88
LMNA-216ENST00000496738 TTC39AQ5SRH9 613 aa20.54■□□□□ 0.88
LMNA-216ENST00000496738 CCDC158Q5M9N0 1113 aa20.53■□□□□ 0.88
LMNA-216ENST00000496738 MINPP1Q9UNW1 487 aa20.53■□□□□ 0.88
LMNA-216ENST00000496738 NRXN2Q9P2S2 1712 aa20.53■□□□□ 0.88
LMNA-216ENST00000496738 FGFR2P21802 821 aa20.53■□□□□ 0.88
LMNA-216ENST00000496738 EVI5LQ96CN4 794 aa20.53■□□□□ 0.88
LMNA-216ENST00000496738 ANKRD31Q8N7Z5 1873 aa20.53■□□□□ 0.88
LMNA-216ENST00000496738 CRY2Q49AN0 593 aa20.52■□□□□ 0.88
LMNA-216ENST00000496738 LPIN2Q92539 896 aa20.52■□□□□ 0.88
LMNA-216ENST00000496738 SNRKQ9NRH2 765 aa20.52■□□□□ 0.88
LMNA-216ENST00000496738 A0A1B0GUL6 1792 aa20.52■□□□□ 0.88
LMNA-216ENST00000496738 IFIT1P09914 478 aaKnown RBP20.52■□□□□ 0.87
LMNA-216ENST00000496738 GRAPQ13588 217 aa20.52■□□□□ 0.87
LMNA-216ENST00000496738 GRAPLQ8TC17 118 aaPredicted RBP20.52■□□□□ 0.87
LMNA-216ENST00000496738 HAUS7Q99871 368 aa20.52■□□□□ 0.87
LMNA-216ENST00000496738 FSD1Q9BTV5 496 aa20.52■□□□□ 0.87
LMNA-216ENST00000496738 SLC5A1P13866 664 aa20.51■□□□□ 0.87
LMNA-216ENST00000496738 SCARF1Q14162 830 aa20.51■□□□□ 0.87
LMNA-216ENST00000496738 PI16Q6UXB8 463 aa20.51■□□□□ 0.87
LMNA-216ENST00000496738 IL25Q9H293 177 aa20.51■□□□□ 0.87
LMNA-216ENST00000496738 GOLIM4O00461 696 aa20.5■□□□□ 0.87
LMNA-216ENST00000496738 PHKA1P46020 1223 aa20.5■□□□□ 0.87
LMNA-216ENST00000496738 ESYT1Q9BSJ8 1104 aa20.5■□□□□ 0.87
LMNA-216ENST00000496738 ARAP2Q8WZ64 1704 aa20.5■□□□□ 0.87
LMNA-216ENST00000496738 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.87
LMNA-216ENST00000496738 RBM17Q96I25 401 aaKnown RBP20.49■□□□□ 0.87
LMNA-216ENST00000496738 C22orf23Q9BZE7 217 aa20.49■□□□□ 0.87
LMNA-216ENST00000496738 ANP32AP39687 249 aaKnown RBP20.49■□□□□ 0.87
LMNA-216ENST00000496738 CCDC102BQ68D86 513 aa20.49■□□□□ 0.87
LMNA-216ENST00000496738 CWC27Q6UX04 472 aaKnown RBP20.49■□□□□ 0.87
LMNA-216ENST00000496738 TBC1D32Q96NH3 1257 aa20.49■□□□□ 0.87
LMNA-216ENST00000496738 BRIP1Q9BX63 1249 aa20.49■□□□□ 0.87
LMNA-216ENST00000496738 DIAPH3Q9NSV4 1193 aa20.49■□□□□ 0.87
LMNA-216ENST00000496738 PAG1Q9NWQ8 432 aa20.48■□□□□ 0.87
LMNA-216ENST00000496738 ANTXR1Q9H6X2 564 aa20.48■□□□□ 0.87
LMNA-216ENST00000496738 CHGBP05060 677 aa20.47■□□□□ 0.87
LMNA-216ENST00000496738 MCAMP43121 646 aa20.47■□□□□ 0.87
LMNA-216ENST00000496738 BCAMP50895 628 aa20.47■□□□□ 0.87
LMNA-216ENST00000496738 IL27Q8NEV9 243 aa20.47■□□□□ 0.87
LMNA-216ENST00000496738 UPF1Q92900 1129 aaKnown RBP eCLIP20.47■□□□□ 0.87
LMNA-216ENST00000496738 KLRG2A4D1S0 409 aaPredicted RBP20.46■□□□□ 0.87
LMNA-216ENST00000496738 ZAP70P43403 619 aa20.46■□□□□ 0.87
LMNA-216ENST00000496738 KCNJ4P48050 445 aa20.46■□□□□ 0.87
LMNA-216ENST00000496738 COL11A2P13942 1736 aaPredicted RBP20.46■□□□□ 0.87
LMNA-216ENST00000496738 KLRK1P26718 216 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms