RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 PAG1Q9NWQ8 432 aa18.38■□□□□ 0.53
COL15A1-204ENST00000496686 CCDC171Q6TFL3 1326 aa18.38■□□□□ 0.53
COL15A1-204ENST00000496686 BRWD3Q6RI45 1802 aa18.37■□□□□ 0.53
COL15A1-204ENST00000496686 FAM177BA6PVY3 158 aa18.37■□□□□ 0.53
COL15A1-204ENST00000496686 PDE8BO95263 885 aa18.37■□□□□ 0.53
COL15A1-204ENST00000496686 IGHMBP2P38935 993 aaKnown RBP18.37■□□□□ 0.53
COL15A1-204ENST00000496686 LRRFIP1Q32MZ4 808 aaKnown RBP18.37■□□□□ 0.53
COL15A1-204ENST00000496686 TTC39AQ5SRH9 613 aa18.37■□□□□ 0.53
COL15A1-204ENST00000496686 TRAPPC3LQ5T215 181 aa18.37■□□□□ 0.53
COL15A1-204ENST00000496686 GORABQ5T7V8 394 aa18.37■□□□□ 0.53
COL15A1-204ENST00000496686 TBC1D9BQ66K14 1250 aa18.37■□□□□ 0.53
COL15A1-204ENST00000496686 ARHGEF1Q92888 912 aaKnown RBP18.37■□□□□ 0.53
COL15A1-204ENST00000496686 KCNB2Q92953 911 aa18.37■□□□□ 0.53
COL15A1-204ENST00000496686 SETDB2Q96T68 719 aa18.37■□□□□ 0.53
COL15A1-204ENST00000496686 CDC5LQ99459 802 aaKnown RBP18.37■□□□□ 0.53
COL15A1-204ENST00000496686 DNAJC2Q99543 621 aaKnown RBP18.37■□□□□ 0.53
COL15A1-204ENST00000496686 PUM3Q15397 648 aaKnown RBP18.36■□□□□ 0.53
COL15A1-204ENST00000496686 MPHOSPH8Q99549 860 aa18.36■□□□□ 0.53
COL15A1-204ENST00000496686 CIZ1Q9ULV3 898 aaPredicted RBP18.36■□□□□ 0.53
COL15A1-204ENST00000496686 ARAP2Q8WZ64 1704 aa18.35■□□□□ 0.53
COL15A1-204ENST00000496686 A0A0D9SFI3 127 aa18.35■□□□□ 0.53
COL15A1-204ENST00000496686 CD2BP2O95400 341 aaKnown RBP18.35■□□□□ 0.53
COL15A1-204ENST00000496686 FGFR2P21802 821 aa18.35■□□□□ 0.53
COL15A1-204ENST00000496686 RFC4P35249 363 aa18.35■□□□□ 0.53
COL15A1-204ENST00000496686 ERFEQ4G0M1 354 aa18.35■□□□□ 0.53
COL15A1-204ENST00000496686 LPIN2Q92539 896 aa18.35■□□□□ 0.53
COL15A1-204ENST00000496686 FAM227BQ96M60 508 aa18.35■□□□□ 0.53
COL15A1-204ENST00000496686 CHMP5Q9NZZ3 219 aa18.35■□□□□ 0.53
COL15A1-204ENST00000496686 SRP68Q9UHB9 627 aaKnown RBP18.35■□□□□ 0.53
COL15A1-204ENST00000496686 PALD1Q9ULE6 856 aa18.35■□□□□ 0.53
COL15A1-204ENST00000496686 C4AP0C0L4 1744 aa18.35■□□□□ 0.53
COL15A1-204ENST00000496686 UQCRFS1P1P0C7P4 283 aa18.34■□□□□ 0.53
COL15A1-204ENST00000496686 SSFA2P28290 1259 aa18.34■□□□□ 0.53
COL15A1-204ENST00000496686 ADORA1P30542 326 aa18.34■□□□□ 0.53
COL15A1-204ENST00000496686 MAP4K1Q92918 833 aa18.34■□□□□ 0.53
COL15A1-204ENST00000496686 EDC3Q96F86 508 aaKnown RBP18.34■□□□□ 0.53
COL15A1-204ENST00000496686 HELLSQ9NRZ9 838 aa18.34■□□□□ 0.53
COL15A1-204ENST00000496686 LRRC4BQ9NT99 713 aa18.34■□□□□ 0.53
COL15A1-204ENST00000496686 GOLIM4O00461 696 aa18.33■□□□□ 0.52
COL15A1-204ENST00000496686 SLC5A1P13866 664 aa18.33■□□□□ 0.52
COL15A1-204ENST00000496686 DDIT3P35638 169 aa18.33■□□□□ 0.52
COL15A1-204ENST00000496686 TPTE2Q6XPS3 522 aa18.33■□□□□ 0.52
COL15A1-204ENST00000496686 DDX46Q7L014 1031 aaKnown RBP18.33■□□□□ 0.52
COL15A1-204ENST00000496686 NBPF5PQ86XG9 351 aaPredicted RBP18.33■□□□□ 0.52
COL15A1-204ENST00000496686 SLKQ9H2G2 1235 aaPredicted RBP18.33■□□□□ 0.52
COL15A1-204ENST00000496686 SNX14Q9Y5W7 946 aa18.33■□□□□ 0.52
COL15A1-204ENST00000496686 CARMIL3Q8ND23 1372 aa18.32■□□□□ 0.52
COL15A1-204ENST00000496686 TRIM37O94972 964 aa18.32■□□□□ 0.52
COL15A1-204ENST00000496686 ZFYP08048 801 aaPredicted RBP18.32■□□□□ 0.52
COL15A1-204ENST00000496686 GTF2E1P29083 439 aaPredicted RBP18.32■□□□□ 0.52
COL15A1-204ENST00000496686 PTH1RQ03431 593 aa18.32■□□□□ 0.52
COL15A1-204ENST00000496686 MCMDC2Q4G0Z9 681 aa18.32■□□□□ 0.52
COL15A1-204ENST00000496686 TM6SF1Q9BZW5 370 aa18.32■□□□□ 0.52
COL15A1-204ENST00000496686 SEC31BQ9NQW1 1179 aa18.32■□□□□ 0.52
COL15A1-204ENST00000496686 ARID4AP29374 1257 aaPredicted RBP18.31■□□□□ 0.52
COL15A1-204ENST00000496686 NEK4P51957 841 aa18.31■□□□□ 0.52
COL15A1-204ENST00000496686 NECTIN1Q15223 517 aa18.31■□□□□ 0.52
COL15A1-204ENST00000496686 ZMYM1Q5SVZ6 1142 aa18.31■□□□□ 0.52
COL15A1-204ENST00000496686 RNF20Q5VTR2 975 aa18.31■□□□□ 0.52
COL15A1-204ENST00000496686 BICDL1Q6ZP65 573 aa18.31■□□□□ 0.52
COL15A1-204ENST00000496686 AMIGO3Q86WK7 504 aa18.31■□□□□ 0.52
COL15A1-204ENST00000496686 ANKRD18AQ8IVF6 992 aa18.31■□□□□ 0.52
COL15A1-204ENST00000496686 HMG20BQ9P0W2 317 aa18.31■□□□□ 0.52
COL15A1-204ENST00000496686 RBM8AQ9Y5S9 174 aaKnown RBP18.31■□□□□ 0.52
COL15A1-204ENST00000496686 RNF113AO15541 343 aaKnown RBP18.3■□□□□ 0.52
COL15A1-204ENST00000496686 TAF5LO75529 589 aa18.3■□□□□ 0.52
COL15A1-204ENST00000496686 ZKSCAN1P17029 563 aaPredicted RBP18.3■□□□□ 0.52
COL15A1-204ENST00000496686 TTF1Q15361 905 aaPredicted RBP18.3■□□□□ 0.52
COL15A1-204ENST00000496686 NLRP3Q96P20 1036 aa18.3■□□□□ 0.52
COL15A1-204ENST00000496686 UBR3Q6ZT12 1888 aa18.3■□□□□ 0.52
COL15A1-204ENST00000496686 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.29■□□□□ 0.52
COL15A1-204ENST00000496686 PLSCR1O15162 318 aa18.29■□□□□ 0.52
COL15A1-204ENST00000496686 HSP90AA1P07900 732 aaKnown RBP18.29■□□□□ 0.52
COL15A1-204ENST00000496686 RXRBP28702 533 aa18.29■□□□□ 0.52
COL15A1-204ENST00000496686 BSDC1Q9NW68 430 aaPredicted RBP18.29■□□□□ 0.52
COL15A1-204ENST00000496686 U3KPZ7 1027 aaPredicted RBP18.29■□□□□ 0.52
COL15A1-204ENST00000496686 PHF14O94880 888 aa18.28■□□□□ 0.52
COL15A1-204ENST00000496686 KCNJ4P48050 445 aa18.28■□□□□ 0.52
COL15A1-204ENST00000496686 TXNRD1Q16881 649 aa18.28■□□□□ 0.52
COL15A1-204ENST00000496686 TSGA10IPQ3SY00 556 aa18.28■□□□□ 0.52
COL15A1-204ENST00000496686 CREB3L3Q68CJ9 461 aa18.28■□□□□ 0.52
COL15A1-204ENST00000496686 ZSCAN25Q6NSZ9 544 aa18.28■□□□□ 0.52
COL15A1-204ENST00000496686 SMIM5Q71RC9 77 aa18.28■□□□□ 0.52
COL15A1-204ENST00000496686 ZNF589Q86UQ0 364 aaPredicted RBP18.28■□□□□ 0.52
COL15A1-204ENST00000496686 NDUFB9Q9Y6M9 179 aa18.28■□□□□ 0.52
COL15A1-204ENST00000496686 FKBP4Q02790 459 aaKnown RBP eCLIP18.27■□□□□ 0.52
COL15A1-204ENST00000496686 CHRNDQ07001 517 aa18.27■□□□□ 0.52
COL15A1-204ENST00000496686 NFIXQ14938 502 aa18.27■□□□□ 0.52
COL15A1-204ENST00000496686 CCDC102BQ68D86 513 aa18.27■□□□□ 0.52
COL15A1-204ENST00000496686 PRPF40BQ6NWY9 871 aaKnown RBP18.27■□□□□ 0.52
COL15A1-204ENST00000496686 C3orf67Q6ZVT6 689 aa18.27■□□□□ 0.52
COL15A1-204ENST00000496686 RASEFQ8IZ41 740 aa18.27■□□□□ 0.52
COL15A1-204ENST00000496686 DSCC1Q9BVC3 393 aa18.27■□□□□ 0.52
COL15A1-204ENST00000496686 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.27■□□□□ 0.52
COL15A1-204ENST00000496686 CWC22Q9HCG8 908 aaKnown RBP18.27■□□□□ 0.52
COL15A1-204ENST00000496686 SLC27A2O14975 620 aa18.26■□□□□ 0.51
COL15A1-204ENST00000496686 PSMA5P28066 241 aa18.26■□□□□ 0.51
COL15A1-204ENST00000496686 MCAMP43121 646 aa18.26■□□□□ 0.51
COL15A1-204ENST00000496686 ZAP70P43403 619 aa18.26■□□□□ 0.51
COL15A1-204ENST00000496686 UBE4AQ14139 1066 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms