RNA–Protein interactions for RNA: ENST00000496648.1

PRKX-204, Transcript of protein kinase X-linked, human

TSL 3

Gene PRKX, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKX-204	ENST00000496648	DBF4	Q9UBU7	674 aa	Predicted RBP	10.44	□□□□□ -0.74
PRKX-204	ENST00000496648	FAM177B	A6PVY3	158 aa		10.43	□□□□□ -0.74
PRKX-204	ENST00000496648	NPHP1	O15259	732 aa		10.43	□□□□□ -0.74
PRKX-204	ENST00000496648	CALD1	Q05682	793 aa	Known RBP	10.43	□□□□□ -0.74
PRKX-204	ENST00000496648	TRIM28	Q13263	835 aa	Known RBP	10.43	□□□□□ -0.74
PRKX-204	ENST00000496648	CC2D2B	Q6DHV5	1058 aa		10.43	□□□□□ -0.74
PRKX-204	ENST00000496648	PPP1R42	Q7Z4L9	355 aa		10.43	□□□□□ -0.74
PRKX-204	ENST00000496648	RTKN2	Q8IZC4	609 aa		10.43	□□□□□ -0.74
PRKX-204	ENST00000496648	PLBD2	Q8NHP8	589 aa		10.43	□□□□□ -0.74
PRKX-204	ENST00000496648	UTP14A	Q9BVJ6	771 aa	Known RBP	10.43	□□□□□ -0.74
PRKX-204	ENST00000496648	ABCC4	O15439	1325 aa		10.42	□□□□□ -0.74
PRKX-204	ENST00000496648	IL16	Q14005	1332 aa		10.42	□□□□□ -0.74
PRKX-204	ENST00000496648	FZD9	O00144	591 aa		10.42	□□□□□ -0.74
PRKX-204	ENST00000496648	SLC34A2	O95436	690 aa		10.42	□□□□□ -0.74
PRKX-204	ENST00000496648	VEGFA	P15692	232 aa	Predicted RBP	10.42	□□□□□ -0.74
PRKX-204	ENST00000496648	GRIPAP1	Q4V328	841 aa		10.42	□□□□□ -0.74
PRKX-204	ENST00000496648	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
PRKX-204	ENST00000496648	C8orf58	Q8NAV2	365 aa		10.42	□□□□□ -0.74
PRKX-204	ENST00000496648	NECTIN2	Q92692	538 aa		10.42	□□□□□ -0.74
PRKX-204	ENST00000496648	HYPK	Q9NX55	129 aa		10.42	□□□□□ -0.74
PRKX-204	ENST00000496648	ZNF541	Q9H0D2	1346 aa		10.41	□□□□□ -0.74
PRKX-204	ENST00000496648	WWC1	Q8IX03	1113 aa		10.41	□□□□□ -0.74
PRKX-204	ENST00000496648	SYNE4	Q8N205	404 aa		10.41	□□□□□ -0.74
PRKX-204	ENST00000496648	SMC1B	Q8NDV3	1235 aa		10.41	□□□□□ -0.74
PRKX-204	ENST00000496648	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.41	□□□□□ -0.74
PRKX-204	ENST00000496648	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.41	□□□□□ -0.74
PRKX-204	ENST00000496648	THSD7B	Q9C0I4	1608 aa		10.4	□□□□□ -0.74
PRKX-204	ENST00000496648	SH3TC1	Q8TE82	1336 aa		10.4	□□□□□ -0.74
PRKX-204	ENST00000496648	DPYSL4	O14531	572 aa		10.4	□□□□□ -0.74
PRKX-204	ENST00000496648	GTF2E1	P29083	439 aa	Predicted RBP	10.4	□□□□□ -0.74
PRKX-204	ENST00000496648	IARS	P41252	1262 aa	Known RBP	10.4	□□□□□ -0.74
PRKX-204	ENST00000496648	ANKRD13D	Q6ZTN6	518 aa		10.4	□□□□□ -0.74
PRKX-204	ENST00000496648	TSPYL6	Q8N831	410 aa		10.4	□□□□□ -0.74
PRKX-204	ENST00000496648	RPGR	Q92834	1020 aa	Known RBP	10.4	□□□□□ -0.74
PRKX-204	ENST00000496648	ATP6V0A2	Q9Y487	856 aa		10.4	□□□□□ -0.74
PRKX-204	ENST00000496648	LAS1L	Q9Y4W2	734 aa	Known RBP	10.4	□□□□□ -0.74
PRKX-204	ENST00000496648	PPEF1	O14829	653 aa	Predicted RBP	10.39	□□□□□ -0.75
PRKX-204	ENST00000496648	DDN	O94850	711 aa	Predicted RBP	10.39	□□□□□ -0.75
PRKX-204	ENST00000496648	AIMP1	Q12904	312 aa	Known RBP	10.39	□□□□□ -0.75
PRKX-204	ENST00000496648	RBM17	Q96I25	401 aa	Known RBP	10.39	□□□□□ -0.75
PRKX-204	ENST00000496648	NLRP3	Q96P20	1036 aa		10.39	□□□□□ -0.75
PRKX-204	ENST00000496648	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.39	□□□□□ -0.75
PRKX-204	ENST00000496648	TESPA1	A2RU30	521 aa	Predicted RBP	10.38	□□□□□ -0.75
PRKX-204	ENST00000496648	HCLS1	P14317	486 aa	Predicted RBP	10.38	□□□□□ -0.75
PRKX-204	ENST00000496648	SF3B3	Q15393	1217 aa	Known RBP	10.38	□□□□□ -0.75
PRKX-204	ENST00000496648	PHAX	Q9H814	394 aa	Known RBP	10.38	□□□□□ -0.75
PRKX-204	ENST00000496648	ZNF521	Q96K83	1311 aa		10.37	□□□□□ -0.75
PRKX-204	ENST00000496648	POTEB2	H3BUK9	544 aa		10.37	□□□□□ -0.75
PRKX-204	ENST00000496648	POTEJ	P0CG39	1038 aa		10.37	□□□□□ -0.75
PRKX-204	ENST00000496648	SP8	Q8IXZ3	490 aa		10.37	□□□□□ -0.75
PRKX-204	ENST00000496648	TSR2	Q969E8	191 aa	Known RBP	10.37	□□□□□ -0.75
PRKX-204	ENST00000496648	VPS33B	Q9H267	617 aa		10.37	□□□□□ -0.75
PRKX-204	ENST00000496648	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.37	□□□□□ -0.75
PRKX-204	ENST00000496648	MRS2	Q9HD23	443 aa		10.37	□□□□□ -0.75
PRKX-204	ENST00000496648	TRMT112	Q9UI30	125 aa	Known RBP	10.37	□□□□□ -0.75
PRKX-204	ENST00000496648	PASK	Q96RG2	1323 aa		10.36	□□□□□ -0.75
PRKX-204	ENST00000496648	FANCI	Q9NVI1	1328 aa		10.36	□□□□□ -0.75
PRKX-204	ENST00000496648	IQCA1L	A6NCM1	817 aa		10.36	□□□□□ -0.75
PRKX-204	ENST00000496648	BBOX1	O75936	387 aa		10.36	□□□□□ -0.75
PRKX-204	ENST00000496648	GRAP	Q13588	217 aa		10.36	□□□□□ -0.75
PRKX-204	ENST00000496648	CCDC30	Q5VVM6	783 aa		10.36	□□□□□ -0.75
PRKX-204	ENST00000496648	TMC4	Q7Z404	712 aa		10.36	□□□□□ -0.75
PRKX-204	ENST00000496648	GPC2	Q8N158	579 aa		10.36	□□□□□ -0.75
PRKX-204	ENST00000496648	GRAPL	Q8TC17	118 aa	Predicted RBP	10.36	□□□□□ -0.75
PRKX-204	ENST00000496648	FAM89A	Q96GI7	184 aa		10.36	□□□□□ -0.75
PRKX-204	ENST00000496648	ECM29	Q5VYK3	1845 aa		10.35	□□□□□ -0.75
PRKX-204	ENST00000496648	ZNF609	O15014	1411 aa		10.35	□□□□□ -0.75
PRKX-204	ENST00000496648	ATP5J2-PTCD1	G3V325	749 aa		10.35	□□□□□ -0.75
PRKX-204	ENST00000496648	FOXN1	O15353	648 aa		10.35	□□□□□ -0.75
PRKX-204	ENST00000496648	ANP32C	O43423	234 aa		10.35	□□□□□ -0.75
PRKX-204	ENST00000496648	MLLT3	P42568	568 aa	Predicted RBP	10.35	□□□□□ -0.75
PRKX-204	ENST00000496648	WDR63	Q8IWG1	891 aa		10.35	□□□□□ -0.75
PRKX-204	ENST00000496648	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.35	□□□□□ -0.75
PRKX-204	ENST00000496648	CCDC191	Q8NCU4	936 aa		10.35	□□□□□ -0.75
PRKX-204	ENST00000496648	METTL22	Q9BUU2	404 aa	Predicted RBP	10.35	□□□□□ -0.75
PRKX-204	ENST00000496648	CHMP4A	Q9BY43	222 aa		10.35	□□□□□ -0.75
PRKX-204	ENST00000496648	RTL9	Q8NET4	1388 aa		10.35	□□□□□ -0.75
PRKX-204	ENST00000496648	CDHR2	Q9BYE9	1310 aa		10.34	□□□□□ -0.75
PRKX-204	ENST00000496648	ELL2	O00472	640 aa	Predicted RBP	10.34	□□□□□ -0.75
PRKX-204	ENST00000496648	PCCA	P05165	728 aa	Predicted RBP	10.34	□□□□□ -0.75
PRKX-204	ENST00000496648	IGKV5-2	P06315	115 aa		10.34	□□□□□ -0.75
PRKX-204	ENST00000496648	SCNN1D	P51172	638 aa		10.34	□□□□□ -0.75
PRKX-204	ENST00000496648	KIAA2012	Q0VF49	1180 aa		10.34	□□□□□ -0.75
PRKX-204	ENST00000496648	LDHD	Q86WU2	507 aa		10.34	□□□□□ -0.75
PRKX-204	ENST00000496648	IRS4	O14654	1257 aa	Predicted RBP	10.33	□□□□□ -0.76
PRKX-204	ENST00000496648	ITGBL1	O95965	494 aa	Predicted RBP	10.33	□□□□□ -0.76
PRKX-204	ENST00000496648	TWISTNB	Q3B726	338 aa	Predicted RBP	10.33	□□□□□ -0.76
PRKX-204	ENST00000496648	KSR2	Q6VAB6	950 aa		10.33	□□□□□ -0.76
PRKX-204	ENST00000496648	DDX46	Q7L014	1031 aa	Known RBP	10.33	□□□□□ -0.76
PRKX-204	ENST00000496648	G2E3	Q7L622	706 aa		10.33	□□□□□ -0.76
PRKX-204	ENST00000496648	RIC3	Q7Z5B4	369 aa		10.33	□□□□□ -0.76
PRKX-204	ENST00000496648	CELF1	Q92879	486 aa	Known RBP	10.33	□□□□□ -0.76
PRKX-204	ENST00000496648	MKRN1	Q9UHC7	482 aa	Known RBP	10.33	□□□□□ -0.76
PRKX-204	ENST00000496648	HACL1	Q9UJ83	578 aa		10.33	□□□□□ -0.76
PRKX-204	ENST00000496648	ARAP2	Q8WZ64	1704 aa		10.33	□□□□□ -0.76
PRKX-204	ENST00000496648	PI4KAP2	A4QPH2	592 aa		10.32	□□□□□ -0.76
PRKX-204	ENST00000496648	VAMP4	O75379	141 aa		10.32	□□□□□ -0.76
PRKX-204	ENST00000496648	EPHX2	P34913	555 aa		10.32	□□□□□ -0.76
PRKX-204	ENST00000496648	AOC3	Q16853	763 aa		10.32	□□□□□ -0.76
PRKX-204	ENST00000496648	LARGE2	Q8N3Y3	721 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms