RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ZNF521Q96K83 1311 aa18.28■□□□□ 0.52
VTI1A-209ENST00000496445 SHTN1A0MZ66 631 aa18.28■□□□□ 0.52
VTI1A-209ENST00000496445 ECE2O60344 883 aa18.28■□□□□ 0.52
VTI1A-209ENST00000496445 FMR1Q06787 632 aaKnown RBP eCLIP18.28■□□□□ 0.52
VTI1A-209ENST00000496445 TNIP1Q15025 636 aa18.28■□□□□ 0.52
VTI1A-209ENST00000496445 TTLL11Q8NHH1 800 aa18.28■□□□□ 0.52
VTI1A-209ENST00000496445 CNKSR2Q8WXI2 1034 aa18.28■□□□□ 0.52
VTI1A-209ENST00000496445 THSD7BQ9C0I4 1608 aa18.27■□□□□ 0.52
VTI1A-209ENST00000496445 H7C1W4 665 aa18.27■□□□□ 0.52
VTI1A-209ENST00000496445 PSMD14O00487 310 aa18.27■□□□□ 0.52
VTI1A-209ENST00000496445 CASP7P55210 303 aa18.27■□□□□ 0.52
VTI1A-209ENST00000496445 FKBP5Q13451 457 aaPredicted RBP18.27■□□□□ 0.52
VTI1A-209ENST00000496445 UBE3BQ7Z3V4 1068 aa18.27■□□□□ 0.52
VTI1A-209ENST00000496445 TRPM4Q8TD43 1214 aa18.27■□□□□ 0.52
VTI1A-209ENST00000496445 DNAAF4Q8WXU2 420 aa18.27■□□□□ 0.52
VTI1A-209ENST00000496445 EYA3Q99504 573 aa18.27■□□□□ 0.52
VTI1A-209ENST00000496445 GREM2Q9H772 168 aa18.27■□□□□ 0.52
VTI1A-209ENST00000496445 KCNQ5Q9NR82 932 aa18.27■□□□□ 0.52
VTI1A-209ENST00000496445 UFL1O94874 794 aa18.26■□□□□ 0.51
VTI1A-209ENST00000496445 GCKRQ14397 625 aa18.26■□□□□ 0.51
VTI1A-209ENST00000496445 DOK7Q18PE1 504 aa18.26■□□□□ 0.51
VTI1A-209ENST00000496445 ANKRD18AQ8IVF6 992 aa18.26■□□□□ 0.51
VTI1A-209ENST00000496445 BCL2L13Q9BXK5 485 aa18.26■□□□□ 0.51
VTI1A-209ENST00000496445 ANKIB1Q9P2G1 1089 aa18.26■□□□□ 0.51
VTI1A-209ENST00000496445 ZBTB12Q9Y330 459 aaPredicted RBP18.26■□□□□ 0.51
VTI1A-209ENST00000496445 HSPA1AP0DMV8 641 aaKnown RBP18.25■□□□□ 0.51
VTI1A-209ENST00000496445 HSPA1BP0DMV9 641 aaKnown RBP18.25■□□□□ 0.51
VTI1A-209ENST00000496445 HIRAP54198 1017 aaPredicted RBP18.25■□□□□ 0.51
VTI1A-209ENST00000496445 IFFO2Q5TF58 517 aa18.25■□□□□ 0.51
VTI1A-209ENST00000496445 MYH16Q9H6N6 1097 aa18.25■□□□□ 0.51
VTI1A-209ENST00000496445 GGA1Q9UJY5 639 aa18.25■□□□□ 0.51
VTI1A-209ENST00000496445 XDHP47989 1333 aa18.24■□□□□ 0.51
VTI1A-209ENST00000496445 TRAF5O00463 557 aa18.24■□□□□ 0.51
VTI1A-209ENST00000496445 MICALL2Q8IY33 904 aa18.24■□□□□ 0.51
VTI1A-209ENST00000496445 LINS1Q8NG48 757 aa18.24■□□□□ 0.51
VTI1A-209ENST00000496445 CDC5LQ99459 802 aaKnown RBP18.24■□□□□ 0.51
VTI1A-209ENST00000496445 PLA2G12BQ9BX93 195 aa18.24■□□□□ 0.51
VTI1A-209ENST00000496445 CNOT7Q9UIV1 285 aaKnown RBP18.24■□□□□ 0.51
VTI1A-209ENST00000496445 WTIPA6NIX2 430 aaPredicted RBP18.23■□□□□ 0.51
VTI1A-209ENST00000496445 RASSF10A6NK89 507 aa18.23■□□□□ 0.51
VTI1A-209ENST00000496445 F6X3S4 739 aa18.23■□□□□ 0.51
VTI1A-209ENST00000496445 VEGFBP49765 207 aa18.23■□□□□ 0.51
VTI1A-209ENST00000496445 ZNF609O15014 1411 aa18.23■□□□□ 0.51
VTI1A-209ENST00000496445 FAM161AQ3B820 660 aa18.22■□□□□ 0.51
VTI1A-209ENST00000496445 DPF2Q92785 391 aa18.22■□□□□ 0.51
VTI1A-209ENST00000496445 ZC3H12CQ9C0D7 883 aaKnown RBP18.22■□□□□ 0.51
VTI1A-209ENST00000496445 BSDC1Q9NW68 430 aaPredicted RBP18.22■□□□□ 0.51
VTI1A-209ENST00000496445 PGAP2Q9UHJ9 254 aa18.22■□□□□ 0.51
VTI1A-209ENST00000496445 POLR2AP24928 1970 aaKnown RBP18.21■□□□□ 0.51
VTI1A-209ENST00000496445 EGFRP00533 1210 aa18.21■□□□□ 0.51
VTI1A-209ENST00000496445 BEND3Q5T5X7 828 aa18.21■□□□□ 0.51
VTI1A-209ENST00000496445 COL13A1Q5TAT6 717 aaPredicted RBP18.21■□□□□ 0.51
VTI1A-209ENST00000496445 CST9Q5W186 159 aa18.21■□□□□ 0.51
VTI1A-209ENST00000496445 GLIS2Q9BZE0 524 aaPredicted RBP18.21■□□□□ 0.51
VTI1A-209ENST00000496445 MINPP1Q9UNW1 487 aa18.21■□□□□ 0.51
VTI1A-209ENST00000496445 MED23Q9ULK4 1368 aa18.2■□□□□ 0.5
VTI1A-209ENST00000496445 CSF1RP07333 972 aa18.2■□□□□ 0.5
VTI1A-209ENST00000496445 RPS12P25398 132 aaKnown RBP18.2■□□□□ 0.5
VTI1A-209ENST00000496445 SAMD7Q7Z3H4 446 aa18.2■□□□□ 0.5
VTI1A-209ENST00000496445 ABT1Q9ULW3 272 aaKnown RBP18.2■□□□□ 0.5
VTI1A-209ENST00000496445 H7C1D1 291 aa18.19■□□□□ 0.5
VTI1A-209ENST00000496445 VIL1P09327 827 aaKnown RBP18.19■□□□□ 0.5
VTI1A-209ENST00000496445 ITGA6P23229 1130 aa18.19■□□□□ 0.5
VTI1A-209ENST00000496445 ATP2B4P23634 1241 aa18.19■□□□□ 0.5
VTI1A-209ENST00000496445 DEFB115Q30KQ5 88 aa18.19■□□□□ 0.5
VTI1A-209ENST00000496445 ZC3H15Q8WU90 426 aaKnown RBP18.19■□□□□ 0.5
VTI1A-209ENST00000496445 TBC1D10BQ4KMP7 808 aaPredicted RBP18.18■□□□□ 0.5
VTI1A-209ENST00000496445 IGHMBP2P38935 993 aaKnown RBP18.17■□□□□ 0.5
VTI1A-209ENST00000496445 CCT4P50991 539 aaKnown RBP18.17■□□□□ 0.5
VTI1A-209ENST00000496445 FOXO4P98177 505 aa18.17■□□□□ 0.5
VTI1A-209ENST00000496445 TLL2Q9Y6L7 1015 aa18.17■□□□□ 0.5
VTI1A-209ENST00000496445 RSBN1LQ6PCB5 846 aaPredicted RBP18.16■□□□□ 0.5
VTI1A-209ENST00000496445 WDR33Q9C0J8 1336 aaKnown RBP18.16■□□□□ 0.5
VTI1A-209ENST00000496445 G3V3G9 751 aa18.15■□□□□ 0.5
VTI1A-209ENST00000496445 CELF2O95319 508 aaKnown RBP18.15■□□□□ 0.5
VTI1A-209ENST00000496445 KLRK1P26718 216 aa18.15■□□□□ 0.5
VTI1A-209ENST00000496445 EPHA10Q5JZY3 1008 aa18.15■□□□□ 0.5
VTI1A-209ENST00000496445 DCAF8Q5TAQ9 597 aa18.15■□□□□ 0.5
VTI1A-209ENST00000496445 DLK2Q6UY11 383 aa18.15■□□□□ 0.5
VTI1A-209ENST00000496445 TXNRD3Q86VQ6 643 aa18.15■□□□□ 0.5
VTI1A-209ENST00000496445 FOXN1O15353 648 aa18.14■□□□□ 0.49
VTI1A-209ENST00000496445 KIF4BQ2VIQ3 1234 aa18.14■□□□□ 0.49
VTI1A-209ENST00000496445 CDC37L1Q7L3B6 337 aa18.14■□□□□ 0.49
VTI1A-209ENST00000496445 PODNQ7Z5L7 613 aa18.14■□□□□ 0.49
VTI1A-209ENST00000496445 AGBL3Q8NEM8 1001 aa18.14■□□□□ 0.49
VTI1A-209ENST00000496445 GMLQ99445 158 aa18.14■□□□□ 0.49
VTI1A-209ENST00000496445 E9PSI1 815 aa18.13■□□□□ 0.49
VTI1A-209ENST00000496445 GRM8O00222 908 aa18.13■□□□□ 0.49
VTI1A-209ENST00000496445 ZNF280AP59817 542 aaPredicted RBP18.13■□□□□ 0.49
VTI1A-209ENST00000496445 RBM26Q5T8P6 1007 aaKnown RBP18.13■□□□□ 0.49
VTI1A-209ENST00000496445 CYP4F22Q6NT55 531 aa18.13■□□□□ 0.49
VTI1A-209ENST00000496445 SAPCD2Q86UD0 394 aa18.13■□□□□ 0.49
VTI1A-209ENST00000496445 USP48Q86UV5 1035 aa18.13■□□□□ 0.49
VTI1A-209ENST00000496445 MRPL50Q8N5N7 158 aaKnown RBP18.13■□□□□ 0.49
VTI1A-209ENST00000496445 CAPNS2Q96L46 248 aa18.13■□□□□ 0.49
VTI1A-209ENST00000496445 MPHOSPH8Q99549 860 aa18.13■□□□□ 0.49
VTI1A-209ENST00000496445 WBP1LQ9NX94 342 aa18.13■□□□□ 0.49
VTI1A-209ENST00000496445 LEMD3Q9Y2U8 911 aa18.13■□□□□ 0.49
VTI1A-209ENST00000496445 ZNF804BA4D1E1 1349 aa18.13■□□□□ 0.49
VTI1A-209ENST00000496445 ASTN2O75129 1339 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms