RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 TTLL7Q6ZT98 887 aa15.56■□□□□ 0.08
ATG3-209ENST00000496423 ARMC9Q7Z3E5 817 aa15.56■□□□□ 0.08
ATG3-209ENST00000496423 DDX60Q8IY21 1712 aaKnown RBP15.56■□□□□ 0.08
ATG3-209ENST00000496423 ANKRD36CQ5JPF3 1778 aa15.56■□□□□ 0.08
ATG3-209ENST00000496423 MKRN3Q13064 507 aaKnown RBP15.55■□□□□ 0.08
ATG3-209ENST00000496423 TAF7Q15545 349 aaPredicted RBP15.55■□□□□ 0.08
ATG3-209ENST00000496423 SLC4A8Q2Y0W8 1093 aa15.55■□□□□ 0.08
ATG3-209ENST00000496423 OTUD7BQ6GQQ9 843 aa15.55■□□□□ 0.08
ATG3-209ENST00000496423 CHRDL2Q6WN34 429 aa15.55■□□□□ 0.08
ATG3-209ENST00000496423 AGBL3Q8NEM8 1001 aa15.55■□□□□ 0.08
ATG3-209ENST00000496423 ZC3H12CQ9C0D7 883 aaKnown RBP15.55■□□□□ 0.08
ATG3-209ENST00000496423 EFCC1Q9HA90 598 aa15.55■□□□□ 0.08
ATG3-209ENST00000496423 MANSC4A6NHS7 340 aaPredicted RBP15.54■□□□□ 0.08
ATG3-209ENST00000496423 MOB2Q70IA6 237 aa15.54■□□□□ 0.08
ATG3-209ENST00000496423 LAMB4A4D0S4 1761 aa15.54■□□□□ 0.08
ATG3-209ENST00000496423 HTATSF1O43719 755 aaKnown RBP15.53■□□□□ 0.08
ATG3-209ENST00000496423 DOK7Q18PE1 504 aa15.53■□□□□ 0.08
ATG3-209ENST00000496423 MCM10Q7L590 875 aa15.53■□□□□ 0.08
ATG3-209ENST00000496423 PNISRQ8TF01 805 aaKnown RBP15.53■□□□□ 0.08
ATG3-209ENST00000496423 R3HDMLQ9H3Y0 253 aa15.53■□□□□ 0.08
ATG3-209ENST00000496423 KIAA0100Q14667 2235 aaKnown RBP15.53■□□□□ 0.08
ATG3-209ENST00000496423 ASTN2O75129 1339 aaPredicted RBP15.52■□□□□ 0.08
ATG3-209ENST00000496423 ZNF280AP59817 542 aaPredicted RBP15.52■□□□□ 0.08
ATG3-209ENST00000496423 HSP90AB3PQ58FF7 597 aa15.52■□□□□ 0.08
ATG3-209ENST00000496423 DPF3Q92784 378 aa15.52■□□□□ 0.08
ATG3-209ENST00000496423 MYOZ2Q9NPC6 264 aa15.52■□□□□ 0.08
ATG3-209ENST00000496423 USP17L8P0C7I0 530 aa15.51■□□□□ 0.07
ATG3-209ENST00000496423 PRKAR2BP31323 418 aa15.51■□□□□ 0.07
ATG3-209ENST00000496423 EIF4G2P78344 907 aaKnown RBP eCLIP15.51■□□□□ 0.07
ATG3-209ENST00000496423 AMER1Q5JTC6 1135 aaPredicted RBP15.51■□□□□ 0.07
ATG3-209ENST00000496423 IFNL1Q8IU54 200 aa15.51■□□□□ 0.07
ATG3-209ENST00000496423 PHACTR3Q96KR7 559 aa15.51■□□□□ 0.07
ATG3-209ENST00000496423 KCNQ5Q9NR82 932 aa15.51■□□□□ 0.07
ATG3-209ENST00000496423 RBM27Q9P2N5 1060 aaKnown RBP15.51■□□□□ 0.07
ATG3-209ENST00000496423 RTL9Q8NET4 1388 aa15.5■□□□□ 0.07
ATG3-209ENST00000496423 HCLS1P14317 486 aaPredicted RBP15.5■□□□□ 0.07
ATG3-209ENST00000496423 SLC9C1Q4G0N8 1177 aa15.5■□□□□ 0.07
ATG3-209ENST00000496423 SPRYD7Q5W111 196 aa15.5■□□□□ 0.07
ATG3-209ENST00000496423 RSBN1LQ6PCB5 846 aaPredicted RBP15.5■□□□□ 0.07
ATG3-209ENST00000496423 SLC10A4Q96EP9 437 aa15.5■□□□□ 0.07
ATG3-209ENST00000496423 TRMT112Q9UI30 125 aaKnown RBP15.5■□□□□ 0.07
ATG3-209ENST00000496423 LAMB2P55268 1798 aa15.49■□□□□ 0.07
ATG3-209ENST00000496423 ERBB4Q15303 1308 aa15.49■□□□□ 0.07
ATG3-209ENST00000496423 SP3Q02447 781 aa15.49■□□□□ 0.07
ATG3-209ENST00000496423 ANKRD13DQ6ZTN6 518 aa15.49■□□□□ 0.07
ATG3-209ENST00000496423 CD99L2Q8TCZ2 262 aa15.49■□□□□ 0.07
ATG3-209ENST00000496423 ZNF333Q96JL9 665 aa15.49■□□□□ 0.07
ATG3-209ENST00000496423 POLLQ9UGP5 575 aa15.49■□□□□ 0.07
ATG3-209ENST00000496423 TIMELESSQ9UNS1 1208 aa15.49■□□□□ 0.07
ATG3-209ENST00000496423 NUDCQ9Y266 331 aa15.49■□□□□ 0.07
ATG3-209ENST00000496423 TRIOBPQ9H2D6 2365 aa15.49■□□□□ 0.07
ATG3-209ENST00000496423 MKI67P46013 3256 aaKnown RBP15.48■□□□□ 0.07
ATG3-209ENST00000496423 SH3TC1Q8TE82 1336 aa15.48■□□□□ 0.07
ATG3-209ENST00000496423 PTPN12Q05209 780 aaKnown RBP15.48■□□□□ 0.07
ATG3-209ENST00000496423 OGFOD1Q8N543 542 aa15.48■□□□□ 0.07
ATG3-209ENST00000496423 DUOX1Q9NRD9 1551 aa15.48■□□□□ 0.07
ATG3-209ENST00000496423 LRRC37AA6NMS7 1700 aa15.47■□□□□ 0.07
ATG3-209ENST00000496423 ZBTB48P10074 688 aaPredicted RBP15.47■□□□□ 0.07
ATG3-209ENST00000496423 PRAMEF18Q5VWM3 479 aa15.47■□□□□ 0.07
ATG3-209ENST00000496423 CFAP53Q96M91 514 aa15.47■□□□□ 0.07
ATG3-209ENST00000496423 NR2E3Q9Y5X4 410 aa15.47■□□□□ 0.07
ATG3-209ENST00000496423 ZNF609O15014 1411 aa15.46■□□□□ 0.07
ATG3-209ENST00000496423 A0A1W2PPC1 479 aa15.46■□□□□ 0.07
ATG3-209ENST00000496423 MMP14P50281 582 aa15.46■□□□□ 0.07
ATG3-209ENST00000496423 GPSM2P81274 684 aa15.46■□□□□ 0.07
ATG3-209ENST00000496423 TBC1D16Q8TBP0 767 aa15.46■□□□□ 0.07
ATG3-209ENST00000496423 HTATIP2Q9BUP3 242 aa15.46■□□□□ 0.07
ATG3-209ENST00000496423 MIS18AQ9NYP9 233 aa15.46■□□□□ 0.07
ATG3-209ENST00000496423 TAF1P21675 1872 aa15.46■□□□□ 0.06
ATG3-209ENST00000496423 NEFMP07197 916 aa15.45■□□□□ 0.06
ATG3-209ENST00000496423 PRKG1Q13976 671 aa15.45■□□□□ 0.06
ATG3-209ENST00000496423 DCTN1Q14203 1278 aa15.45■□□□□ 0.06
ATG3-209ENST00000496423 NLRP10Q86W26 655 aa15.45■□□□□ 0.06
ATG3-209ENST00000496423 RSPH6AQ9H0K4 717 aa15.45■□□□□ 0.06
ATG3-209ENST00000496423 ANGEL1Q9UNK9 670 aaKnown RBP15.45■□□□□ 0.06
ATG3-209ENST00000496423 UNCXA6NJT0 531 aa15.44■□□□□ 0.06
ATG3-209ENST00000496423 CC2D1BQ5T0F9 858 aaKnown RBP15.44■□□□□ 0.06
ATG3-209ENST00000496423 LDLRAD1Q5T700 205 aa15.44■□□□□ 0.06
ATG3-209ENST00000496423 SPINK5Q9NQ38 1064 aaPredicted RBP15.44■□□□□ 0.06
ATG3-209ENST00000496423 ANKIB1Q9P2G1 1089 aa15.44■□□□□ 0.06
ATG3-209ENST00000496423 USP17L3A6NCW0 530 aa15.43■□□□□ 0.06
ATG3-209ENST00000496423 USP17L4A6NCW7 530 aa15.43■□□□□ 0.06
ATG3-209ENST00000496423 EIF4A1P60842 406 aaKnown RBP15.43■□□□□ 0.06
ATG3-209ENST00000496423 USP17L1Q7RTZ2 530 aa15.43■□□□□ 0.06
ATG3-209ENST00000496423 APOBEC3FQ8IUX4 373 aaKnown RBP15.43■□□□□ 0.06
ATG3-209ENST00000496423 NKX2-3Q8TAU0 364 aa15.43■□□□□ 0.06
ATG3-209ENST00000496423 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.43■□□□□ 0.06
ATG3-209ENST00000496423 GGA1Q9UJY5 639 aa15.43■□□□□ 0.06
ATG3-209ENST00000496423 SCAF8Q9UPN6 1271 aaKnown RBP15.43■□□□□ 0.06
ATG3-209ENST00000496423 KDM3BQ7LBC6 1761 aa15.43■□□□□ 0.06
ATG3-209ENST00000496423 PPP1R12BO60237 982 aaPredicted RBP15.42■□□□□ 0.06
ATG3-209ENST00000496423 WDHD1O75717 1129 aaPredicted RBP15.42■□□□□ 0.06
ATG3-209ENST00000496423 HSPA5P11021 654 aaKnown RBP15.42■□□□□ 0.06
ATG3-209ENST00000496423 RPS8P62241 208 aaKnown RBP15.42■□□□□ 0.06
ATG3-209ENST00000496423 CRHR2Q13324 411 aa15.42■□□□□ 0.06
ATG3-209ENST00000496423 SF3B3Q15393 1217 aaKnown RBP15.42■□□□□ 0.06
ATG3-209ENST00000496423 NBPF9Q3BBW0 867 aa15.42■□□□□ 0.06
ATG3-209ENST00000496423 PODNQ7Z5L7 613 aa15.42■□□□□ 0.06
ATG3-209ENST00000496423 CELF1Q92879 486 aaKnown RBP15.42■□□□□ 0.06
ATG3-209ENST00000496423 PODXL2Q9NZ53 605 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms