RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 DOK7Q18PE1 504 aa18.48■□□□□ 0.55
CXCL12-208ENST00000496375 WWC1Q8IX03 1113 aa18.48■□□□□ 0.55
CXCL12-208ENST00000496375 ZC3H15Q8WU90 426 aaKnown RBP18.48■□□□□ 0.55
CXCL12-208ENST00000496375 CCDC85AQ96PX6 553 aaPredicted RBP18.48■□□□□ 0.55
CXCL12-208ENST00000496375 PRDM10Q9NQV6 1147 aa18.48■□□□□ 0.55
CXCL12-208ENST00000496375 MAP3K2Q9Y2U5 619 aa18.48■□□□□ 0.55
CXCL12-208ENST00000496375 IL16Q14005 1332 aa18.48■□□□□ 0.55
CXCL12-208ENST00000496375 CELF2O95319 508 aaKnown RBP18.47■□□□□ 0.55
CXCL12-208ENST00000496375 ECE1P42892 770 aa18.47■□□□□ 0.55
CXCL12-208ENST00000496375 GRM1Q13255 1194 aa18.47■□□□□ 0.55
CXCL12-208ENST00000496375 CYP4F22Q6NT55 531 aa18.47■□□□□ 0.55
CXCL12-208ENST00000496375 KSR2Q6VAB6 950 aa18.47■□□□□ 0.55
CXCL12-208ENST00000496375 CAPNS2Q96L46 248 aa18.47■□□□□ 0.55
CXCL12-208ENST00000496375 STK31Q9BXU1 1019 aa18.47■□□□□ 0.55
CXCL12-208ENST00000496375 PODXL2Q9NZ53 605 aa18.47■□□□□ 0.55
CXCL12-208ENST00000496375 TLL2Q9Y6L7 1015 aa18.47■□□□□ 0.55
CXCL12-208ENST00000496375 PI4KAP2A4QPH2 592 aa18.46■□□□□ 0.55
CXCL12-208ENST00000496375 UFL1O94874 794 aa18.46■□□□□ 0.55
CXCL12-208ENST00000496375 MAP2K1Q02750 393 aaPredicted RBP18.46■□□□□ 0.55
CXCL12-208ENST00000496375 PI4KAP1Q8N8J0 262 aa18.46■□□□□ 0.55
CXCL12-208ENST00000496375 DPF2Q92785 391 aa18.46■□□□□ 0.55
CXCL12-208ENST00000496375 ZC3H12CQ9C0D7 883 aaKnown RBP18.46■□□□□ 0.55
CXCL12-208ENST00000496375 KCNQ5Q9NR82 932 aa18.46■□□□□ 0.55
CXCL12-208ENST00000496375 ANKIB1Q9P2G1 1089 aa18.46■□□□□ 0.55
CXCL12-208ENST00000496375 THSD7BQ9C0I4 1608 aa18.45■□□□□ 0.54
CXCL12-208ENST00000496375 RTL9Q8NET4 1388 aa18.45■□□□□ 0.54
CXCL12-208ENST00000496375 IGKV5-2P06315 115 aa18.45■□□□□ 0.54
CXCL12-208ENST00000496375 TWISTNBQ3B726 338 aaPredicted RBP18.45■□□□□ 0.54
CXCL12-208ENST00000496375 CDC37L1Q7L3B6 337 aa18.45■□□□□ 0.54
CXCL12-208ENST00000496375 SAMD7Q7Z3H4 446 aa18.45■□□□□ 0.54
CXCL12-208ENST00000496375 ZNF408Q9H9D4 720 aa18.45■□□□□ 0.54
CXCL12-208ENST00000496375 GGA1Q9UJY5 639 aa18.45■□□□□ 0.54
CXCL12-208ENST00000496375 ZNF521Q96K83 1311 aa18.45■□□□□ 0.54
CXCL12-208ENST00000496375 RPS12P25398 132 aaKnown RBP18.44■□□□□ 0.54
CXCL12-208ENST00000496375 LBX1P52954 281 aa18.44■□□□□ 0.54
CXCL12-208ENST00000496375 TBC1D10BQ4KMP7 808 aaPredicted RBP18.44■□□□□ 0.54
CXCL12-208ENST00000496375 SAPCD2Q86UD0 394 aa18.44■□□□□ 0.54
CXCL12-208ENST00000496375 ANKRD18AQ8IVF6 992 aa18.44■□□□□ 0.54
CXCL12-208ENST00000496375 SCN9AQ15858 1988 aa18.44■□□□□ 0.54
CXCL12-208ENST00000496375 G3V3G9 751 aa18.43■□□□□ 0.54
CXCL12-208ENST00000496375 EGFRP00533 1210 aa18.43■□□□□ 0.54
CXCL12-208ENST00000496375 HSPA8P11142 646 aaKnown RBP18.43■□□□□ 0.54
CXCL12-208ENST00000496375 CTSWP56202 376 aa18.43■□□□□ 0.54
CXCL12-208ENST00000496375 NEXNQ0ZGT2 675 aa18.43■□□□□ 0.54
CXCL12-208ENST00000496375 DCAF8Q5TAQ9 597 aa18.43■□□□□ 0.54
CXCL12-208ENST00000496375 G2E3Q7L622 706 aa18.43■□□□□ 0.54
CXCL12-208ENST00000496375 WDR63Q8IWG1 891 aa18.43■□□□□ 0.54
CXCL12-208ENST00000496375 SLC4A2P04920 1241 aa18.42■□□□□ 0.54
CXCL12-208ENST00000496375 CWF19L2Q2TBE0 894 aaKnown RBP18.42■□□□□ 0.54
CXCL12-208ENST00000496375 USP48Q86UV5 1035 aa18.42■□□□□ 0.54
CXCL12-208ENST00000496375 MYH3P11055 1940 aa18.42■□□□□ 0.54
CXCL12-208ENST00000496375 VIL1P09327 827 aaKnown RBP18.41■□□□□ 0.54
CXCL12-208ENST00000496375 RBM26Q5T8P6 1007 aaKnown RBP18.41■□□□□ 0.54
CXCL12-208ENST00000496375 CDC5LQ99459 802 aaKnown RBP18.41■□□□□ 0.54
CXCL12-208ENST00000496375 XDHP47989 1333 aa18.41■□□□□ 0.54
CXCL12-208ENST00000496375 POLR2AP24928 1970 aaKnown RBP18.41■□□□□ 0.54
CXCL12-208ENST00000496375 SPEF2Q9C093 1822 aa18.4■□□□□ 0.54
CXCL12-208ENST00000496375 NEURL1BA8MQ27 555 aa18.4■□□□□ 0.54
CXCL12-208ENST00000496375 AOC2O75106 756 aa18.4■□□□□ 0.54
CXCL12-208ENST00000496375 DLK2Q6UY11 383 aa18.4■□□□□ 0.54
CXCL12-208ENST00000496375 TTLL11Q8NHH1 800 aa18.4■□□□□ 0.54
CXCL12-208ENST00000496375 HHIPL1Q96JK4 782 aa18.4■□□□□ 0.54
CXCL12-208ENST00000496375 BEGAINQ9BUH8 593 aa18.4■□□□□ 0.54
CXCL12-208ENST00000496375 ATP2B4P23634 1241 aa18.39■□□□□ 0.53
CXCL12-208ENST00000496375 MAP2K2P36507 400 aa18.39■□□□□ 0.53
CXCL12-208ENST00000496375 KIF4BQ2VIQ3 1234 aa18.39■□□□□ 0.53
CXCL12-208ENST00000496375 GREM2Q9H772 168 aa18.39■□□□□ 0.53
CXCL12-208ENST00000496375 SALL2Q9Y467 1007 aaPredicted RBP18.39■□□□□ 0.53
CXCL12-208ENST00000496375 FANCIQ9NVI1 1328 aa18.39■□□□□ 0.53
CXCL12-208ENST00000496375 PSME4Q14997 1843 aa18.38■□□□□ 0.53
CXCL12-208ENST00000496375 FLIIQ13045 1269 aa18.38■□□□□ 0.53
CXCL12-208ENST00000496375 UBE3BQ7Z3V4 1068 aa18.38■□□□□ 0.53
CXCL12-208ENST00000496375 KRT26Q7Z3Y9 468 aa18.38■□□□□ 0.53
CXCL12-208ENST00000496375 DCPSQ96C86 337 aaKnown RBP18.38■□□□□ 0.53
CXCL12-208ENST00000496375 ADM5C9JUS6 153 aa18.37■□□□□ 0.53
CXCL12-208ENST00000496375 H7C1W4 665 aa18.37■□□□□ 0.53
CXCL12-208ENST00000496375 RSBN1LQ6PCB5 846 aaPredicted RBP18.37■□□□□ 0.53
CXCL12-208ENST00000496375 BSDC1Q9NW68 430 aaPredicted RBP18.37■□□□□ 0.53
CXCL12-208ENST00000496375 MINPP1Q9UNW1 487 aa18.37■□□□□ 0.53
CXCL12-208ENST00000496375 WTIPA6NIX2 430 aaPredicted RBP18.36■□□□□ 0.53
CXCL12-208ENST00000496375 CACNA1FO60840 1977 aa18.36■□□□□ 0.53
CXCL12-208ENST00000496375 HUNKP57058 714 aa18.36■□□□□ 0.53
CXCL12-208ENST00000496375 FKBP5Q13451 457 aaPredicted RBP18.36■□□□□ 0.53
CXCL12-208ENST00000496375 GCKRQ14397 625 aa18.36■□□□□ 0.53
CXCL12-208ENST00000496375 AGBL3Q8NEM8 1001 aa18.36■□□□□ 0.53
CXCL12-208ENST00000496375 ZNF609O15014 1411 aa18.35■□□□□ 0.53
CXCL12-208ENST00000496375 VAMP4O75379 141 aa18.35■□□□□ 0.53
CXCL12-208ENST00000496375 DNAAF4Q8WXU2 420 aa18.35■□□□□ 0.53
CXCL12-208ENST00000496375 GGA3Q9NZ52 723 aa18.35■□□□□ 0.53
CXCL12-208ENST00000496375 MED23Q9ULK4 1368 aa18.34■□□□□ 0.53
CXCL12-208ENST00000496375 ASTN2O75129 1339 aaPredicted RBP18.34■□□□□ 0.53
CXCL12-208ENST00000496375 IGHMBP2P38935 993 aaKnown RBP18.34■□□□□ 0.53
CXCL12-208ENST00000496375 ZNF280AP59817 542 aaPredicted RBP18.34■□□□□ 0.53
CXCL12-208ENST00000496375 PODNQ7Z5L7 613 aa18.34■□□□□ 0.53
CXCL12-208ENST00000496375 MYH16Q9H6N6 1097 aa18.34■□□□□ 0.53
CXCL12-208ENST00000496375 TSKSQ9UJT2 592 aa18.34■□□□□ 0.53
CXCL12-208ENST00000496375 USP17L3A6NCW0 530 aa18.33■□□□□ 0.52
CXCL12-208ENST00000496375 USP17L4A6NCW7 530 aa18.33■□□□□ 0.52
CXCL12-208ENST00000496375 CCT4P50991 539 aaKnown RBP18.33■□□□□ 0.52
CXCL12-208ENST00000496375 BRPF1P55201 1214 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms