RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 ECE1P42892 770 aa16.82■□□□□ 0.28
USF1-207ENST00000496363 MAP2K1Q02750 393 aaPredicted RBP16.82■□□□□ 0.28
USF1-207ENST00000496363 SAMD7Q7Z3H4 446 aa16.82■□□□□ 0.28
USF1-207ENST00000496363 CCDC191Q8NCU4 936 aa16.82■□□□□ 0.28
USF1-207ENST00000496363 METTL22Q9BUU2 404 aaPredicted RBP16.82■□□□□ 0.28
USF1-207ENST00000496363 CWC25Q9NXE8 425 aaPredicted RBP16.82■□□□□ 0.28
USF1-207ENST00000496363 PCCAP05165 728 aaPredicted RBP16.81■□□□□ 0.28
USF1-207ENST00000496363 TBC1D10BQ4KMP7 808 aaPredicted RBP16.81■□□□□ 0.28
USF1-207ENST00000496363 CCDC30Q5VVM6 783 aa16.81■□□□□ 0.28
USF1-207ENST00000496363 SAPCD2Q86UD0 394 aa16.81■□□□□ 0.28
USF1-207ENST00000496363 ZC3H15Q8WU90 426 aaKnown RBP16.81■□□□□ 0.28
USF1-207ENST00000496363 EYA3Q99504 573 aa16.81■□□□□ 0.28
USF1-207ENST00000496363 MAP3K2Q9Y2U5 619 aa16.81■□□□□ 0.28
USF1-207ENST00000496363 PSME4Q14997 1843 aa16.81■□□□□ 0.28
USF1-207ENST00000496363 UFL1O94874 794 aa16.8■□□□□ 0.28
USF1-207ENST00000496363 CCDC152Q4G0S7 254 aa16.8■□□□□ 0.28
USF1-207ENST00000496363 USP48Q86UV5 1035 aa16.8■□□□□ 0.28
USF1-207ENST00000496363 DPF2Q92785 391 aa16.8■□□□□ 0.28
USF1-207ENST00000496363 PDE8AO60658 829 aa16.79■□□□□ 0.28
USF1-207ENST00000496363 DDX58O95786 925 aaKnown RBP16.79■□□□□ 0.28
USF1-207ENST00000496363 RBM26Q5T8P6 1007 aaKnown RBP16.79■□□□□ 0.28
USF1-207ENST00000496363 CDC37L1Q7L3B6 337 aa16.79■□□□□ 0.28
USF1-207ENST00000496363 PODXL2Q9NZ53 605 aa16.79■□□□□ 0.28
USF1-207ENST00000496363 ANKIB1Q9P2G1 1089 aa16.79■□□□□ 0.28
USF1-207ENST00000496363 IGKV5-2P06315 115 aa16.78■□□□□ 0.28
USF1-207ENST00000496363 HSP90B1P14625 803 aaKnown RBP16.78■□□□□ 0.28
USF1-207ENST00000496363 ZC3H12CQ9C0D7 883 aaKnown RBP16.78■□□□□ 0.28
USF1-207ENST00000496363 TSKSQ9UJT2 592 aa16.78■□□□□ 0.28
USF1-207ENST00000496363 GGA1Q9UJY5 639 aa16.78■□□□□ 0.28
USF1-207ENST00000496363 PI4KAP2A4QPH2 592 aa16.77■□□□□ 0.28
USF1-207ENST00000496363 RPS12P25398 132 aaKnown RBP16.77■□□□□ 0.28
USF1-207ENST00000496363 KSR2Q6VAB6 950 aa16.77■□□□□ 0.28
USF1-207ENST00000496363 G2E3Q7L622 706 aa16.77■□□□□ 0.28
USF1-207ENST00000496363 PI4KAP1Q8N8J0 262 aa16.77■□□□□ 0.28
USF1-207ENST00000496363 ADM5C9JUS6 153 aa16.76■□□□□ 0.27
USF1-207ENST00000496363 ANKRD18AQ8IVF6 992 aa16.76■□□□□ 0.27
USF1-207ENST00000496363 BEGAINQ9BUH8 593 aa16.76■□□□□ 0.27
USF1-207ENST00000496363 ASTN2O75129 1339 aaPredicted RBP16.75■□□□□ 0.27
USF1-207ENST00000496363 CASP8AP2Q9UKL3 1982 aa16.75■□□□□ 0.27
USF1-207ENST00000496363 WTIPA6NIX2 430 aaPredicted RBP16.75■□□□□ 0.27
USF1-207ENST00000496363 G3V3G9 751 aa16.75■□□□□ 0.27
USF1-207ENST00000496363 VIL1P09327 827 aaKnown RBP16.75■□□□□ 0.27
USF1-207ENST00000496363 MAP2K2P36507 400 aa16.75■□□□□ 0.27
USF1-207ENST00000496363 CTSWP56202 376 aa16.75■□□□□ 0.27
USF1-207ENST00000496363 CWF19L2Q2TBE0 894 aaKnown RBP16.75■□□□□ 0.27
USF1-207ENST00000496363 KIF4BQ2VIQ3 1234 aa16.75■□□□□ 0.27
USF1-207ENST00000496363 DCAF8Q5TAQ9 597 aa16.75■□□□□ 0.27
USF1-207ENST00000496363 KRT26Q7Z3Y9 468 aa16.75■□□□□ 0.27
USF1-207ENST00000496363 WWC1Q8IX03 1113 aa16.75■□□□□ 0.27
USF1-207ENST00000496363 STK31Q9BXU1 1019 aa16.75■□□□□ 0.27
USF1-207ENST00000496363 XDHP47989 1333 aa16.74■□□□□ 0.27
USF1-207ENST00000496363 HUNKP57058 714 aa16.74■□□□□ 0.27
USF1-207ENST00000496363 CCDC27Q2M243 656 aa16.74■□□□□ 0.27
USF1-207ENST00000496363 TWISTNBQ3B726 338 aaPredicted RBP16.74■□□□□ 0.27
USF1-207ENST00000496363 HHIPL1Q96JK4 782 aa16.74■□□□□ 0.27
USF1-207ENST00000496363 ZIC5Q96T25 663 aa16.74■□□□□ 0.27
USF1-207ENST00000496363 CHMP4AQ9BY43 222 aa16.74■□□□□ 0.27
USF1-207ENST00000496363 GREM2Q9H772 168 aa16.74■□□□□ 0.27
USF1-207ENST00000496363 ZNF646O15015 1829 aaPredicted RBP16.74■□□□□ 0.27
USF1-207ENST00000496363 CACNA1FO60840 1977 aa16.73■□□□□ 0.27
USF1-207ENST00000496363 NEURL1BA8MQ27 555 aa16.73■□□□□ 0.27
USF1-207ENST00000496363 TTLL11Q8NHH1 800 aa16.73■□□□□ 0.27
USF1-207ENST00000496363 GGA3Q9NZ52 723 aa16.73■□□□□ 0.27
USF1-207ENST00000496363 SLC4A2P04920 1241 aa16.72■□□□□ 0.27
USF1-207ENST00000496363 NEXNQ0ZGT2 675 aa16.72■□□□□ 0.27
USF1-207ENST00000496363 RSBN1LQ6PCB5 846 aaPredicted RBP16.72■□□□□ 0.27
USF1-207ENST00000496363 DCPSQ96C86 337 aaKnown RBP16.72■□□□□ 0.27
USF1-207ENST00000496363 ABHD8Q96I13 439 aa16.72■□□□□ 0.27
USF1-207ENST00000496363 CDC5LQ99459 802 aaKnown RBP16.72■□□□□ 0.27
USF1-207ENST00000496363 ZNF609O15014 1411 aa16.71■□□□□ 0.27
USF1-207ENST00000496363 ATP2B4P23634 1241 aa16.71■□□□□ 0.27
USF1-207ENST00000496363 BRPF1P55201 1214 aaPredicted RBP16.71■□□□□ 0.27
USF1-207ENST00000496363 UBE3BQ7Z3V4 1068 aa16.71■□□□□ 0.27
USF1-207ENST00000496363 GBA2Q9HCG7 927 aaPredicted RBP16.71■□□□□ 0.27
USF1-207ENST00000496363 MINPP1Q9UNW1 487 aa16.71■□□□□ 0.27
USF1-207ENST00000496363 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
USF1-207ENST00000496363 ZNF280AP59817 542 aaPredicted RBP16.7■□□□□ 0.26
USF1-207ENST00000496363 GMLQ99445 158 aa16.7■□□□□ 0.26
USF1-207ENST00000496363 MRS2Q9HD23 443 aa16.7■□□□□ 0.26
USF1-207ENST00000496363 SALL2Q9Y467 1007 aaPredicted RBP16.7■□□□□ 0.26
USF1-207ENST00000496363 IL16Q14005 1332 aa16.7■□□□□ 0.26
USF1-207ENST00000496363 MED23Q9ULK4 1368 aa16.69■□□□□ 0.26
USF1-207ENST00000496363 H7C1W4 665 aa16.69■□□□□ 0.26
USF1-207ENST00000496363 FLIIQ13045 1269 aa16.69■□□□□ 0.26
USF1-207ENST00000496363 SCARF1Q14162 830 aa16.69■□□□□ 0.26
USF1-207ENST00000496363 ANGEL2Q5VTE6 544 aaKnown RBP16.69■□□□□ 0.26
USF1-207ENST00000496363 SULF1Q8IWU6 871 aa16.69■□□□□ 0.26
USF1-207ENST00000496363 AGBL3Q8NEM8 1001 aa16.69■□□□□ 0.26
USF1-207ENST00000496363 CDCA5Q96FF9 252 aa16.69■□□□□ 0.26
USF1-207ENST00000496363 MXD3Q9BW11 206 aa16.69■□□□□ 0.26
USF1-207ENST00000496363 BSDC1Q9NW68 430 aaPredicted RBP16.69■□□□□ 0.26
USF1-207ENST00000496363 USP17L3A6NCW0 530 aa16.68■□□□□ 0.26
USF1-207ENST00000496363 USP17L4A6NCW7 530 aa16.68■□□□□ 0.26
USF1-207ENST00000496363 FAM155AB1AL88 458 aaPredicted RBP16.68■□□□□ 0.26
USF1-207ENST00000496363 NOGQ13253 232 aa16.68■□□□□ 0.26
USF1-207ENST00000496363 GCKRQ14397 625 aa16.68■□□□□ 0.26
USF1-207ENST00000496363 FAM161AQ3B820 660 aa16.68■□□□□ 0.26
USF1-207ENST00000496363 RGMBQ6NW40 437 aa16.68■□□□□ 0.26
USF1-207ENST00000496363 USP17L1Q7RTZ2 530 aa16.68■□□□□ 0.26
USF1-207ENST00000496363 C2orf69Q8N8R5 385 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms