RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 ZCRB1Q8TBF4 217 aaKnown RBP6.8□□□□□ -1.32
XPA-204ENST00000496104 PIGBQ92521 554 aa6.8□□□□□ -1.32
XPA-204ENST00000496104 DDRGK1Q96HY6 314 aa6.8□□□□□ -1.32
XPA-204ENST00000496104 CABP1Q9NZU7 370 aa6.8□□□□□ -1.32
XPA-204ENST00000496104 SRP68Q9UHB9 627 aaKnown RBP6.8□□□□□ -1.32
XPA-204ENST00000496104 USP31Q70CQ4 1352 aa6.8□□□□□ -1.32
XPA-204ENST00000496104 CACNA1SQ13698 1873 aa6.79□□□□□ -1.32
XPA-204ENST00000496104 ITGAEP38570 1179 aa6.79□□□□□ -1.32
XPA-204ENST00000496104 CTC1Q2NKJ3 1217 aa6.79□□□□□ -1.32
XPA-204ENST00000496104 EAPPQ56P03 285 aaPredicted RBP6.79□□□□□ -1.32
XPA-204ENST00000496104 SAPCD2Q86UD0 394 aa6.79□□□□□ -1.32
XPA-204ENST00000496104 PARP3Q9Y6F1 533 aa6.79□□□□□ -1.32
XPA-204ENST00000496104 COL4A5P29400 1685 aa6.79□□□□□ -1.32
XPA-204ENST00000496104 LTBP3Q9NS15 1303 aa6.78□□□□□ -1.32
XPA-204ENST00000496104 BCORQ6W2J9 1755 aa6.78□□□□□ -1.32
XPA-204ENST00000496104 GRXCR2A6NFK2 248 aa6.78□□□□□ -1.32
XPA-204ENST00000496104 CYP27B1O15528 508 aa6.78□□□□□ -1.32
XPA-204ENST00000496104 EPHX2P34913 555 aa6.78□□□□□ -1.32
XPA-204ENST00000496104 SMCPP49901 116 aaPredicted RBP6.78□□□□□ -1.32
XPA-204ENST00000496104 MPRIPQ6WCQ1 1025 aa6.78□□□□□ -1.32
XPA-204ENST00000496104 REPIN1Q9BWE0 567 aaKnown RBP6.78□□□□□ -1.32
XPA-204ENST00000496104 TTC28Q96AY4 2481 aa6.78□□□□□ -1.32
XPA-204ENST00000496104 CD163L1Q9NR16 1453 aa6.78□□□□□ -1.32
XPA-204ENST00000496104 RNF123Q5XPI4 1314 aa6.77□□□□□ -1.32
XPA-204ENST00000496104 KIAA0100Q14667 2235 aaKnown RBP6.77□□□□□ -1.33
XPA-204ENST00000496104 IQCA1LA6NCM1 817 aa6.77□□□□□ -1.33
XPA-204ENST00000496104 SOX1O00570 391 aaPredicted RBP6.77□□□□□ -1.33
XPA-204ENST00000496104 SNRPBP14678 240 aaKnown RBP6.77□□□□□ -1.33
XPA-204ENST00000496104 TM4SF1P30408 202 aa6.77□□□□□ -1.33
XPA-204ENST00000496104 SLC4A3P48751 1232 aa6.77□□□□□ -1.33
XPA-204ENST00000496104 HIC1Q14526 733 aa6.77□□□□□ -1.33
XPA-204ENST00000496104 CTU1Q7Z7A3 348 aaKnown RBP6.77□□□□□ -1.33
XPA-204ENST00000496104 PRO3102Q9H379 93 aa6.77□□□□□ -1.33
XPA-204ENST00000496104 PRDM6Q9NQX0 595 aa6.77□□□□□ -1.33
XPA-204ENST00000496104 TOR4AQ9NXH8 423 aa6.77□□□□□ -1.33
XPA-204ENST00000496104 ASAP1Q9ULH1 1129 aa6.77□□□□□ -1.33
XPA-204ENST00000496104 SLX4Q8IY92 1834 aa6.77□□□□□ -1.33
XPA-204ENST00000496104 ERBB4Q15303 1308 aa6.76□□□□□ -1.33
XPA-204ENST00000496104 USP42Q9H9J4 1324 aaKnown RBP6.76□□□□□ -1.33
XPA-204ENST00000496104 FAM155AB1AL88 458 aaPredicted RBP6.76□□□□□ -1.33
XPA-204ENST00000496104 ARFGEF2Q9Y6D5 1785 aa6.76□□□□□ -1.33
XPA-204ENST00000496104 A6NJR5 290 aa6.75□□□□□ -1.33
XPA-204ENST00000496104 ADH1BP00325 375 aa6.75□□□□□ -1.33
XPA-204ENST00000496104 MS4A1P11836 297 aa6.75□□□□□ -1.33
XPA-204ENST00000496104 HSP90B1P14625 803 aaKnown RBP6.75□□□□□ -1.33
XPA-204ENST00000496104 CDK11BP21127 795 aaKnown RBP6.75□□□□□ -1.33
XPA-204ENST00000496104 LORP23490 312 aaPredicted RBP6.75□□□□□ -1.33
XPA-204ENST00000496104 FLIIQ13045 1269 aa6.75□□□□□ -1.33
XPA-204ENST00000496104 TRAPPC3LQ5T215 181 aa6.75□□□□□ -1.33
XPA-204ENST00000496104 KCTD17Q8N5Z5 321 aa6.75□□□□□ -1.33
XPA-204ENST00000496104 TTLL6Q8N841 843 aa6.75□□□□□ -1.33
XPA-204ENST00000496104 SMARCC1Q92922 1105 aaPredicted RBP6.75□□□□□ -1.33
XPA-204ENST00000496104 RBM27Q9P2N5 1060 aaKnown RBP6.75□□□□□ -1.33
XPA-204ENST00000496104 HACL1Q9UJ83 578 aa6.75□□□□□ -1.33
XPA-204ENST00000496104 TJP1Q07157 1748 aa6.75□□□□□ -1.33
XPA-204ENST00000496104 TTC21AQ8NDW8 1320 aa6.75□□□□□ -1.33
XPA-204ENST00000496104 SBNO2Q9Y2G9 1366 aa6.74□□□□□ -1.33
XPA-204ENST00000496104 C21orf2O43822 256 aa6.74□□□□□ -1.33
XPA-204ENST00000496104 PTGDRQ13258 359 aa6.74□□□□□ -1.33
XPA-204ENST00000496104 CYP4X1Q8N118 509 aa6.74□□□□□ -1.33
XPA-204ENST00000496104 ZSCAN1Q8NBB4 408 aa6.74□□□□□ -1.33
XPA-204ENST00000496104 HHIPL1Q96JK4 782 aa6.74□□□□□ -1.33
XPA-204ENST00000496104 CDHR5Q9HBB8 845 aa6.74□□□□□ -1.33
XPA-204ENST00000496104 NPDC1Q9NQX5 325 aaPredicted RBP6.74□□□□□ -1.33
XPA-204ENST00000496104 RNF186Q9NXI6 227 aa6.74□□□□□ -1.33
XPA-204ENST00000496104 SAGE1Q9NXZ1 904 aa6.74□□□□□ -1.33
XPA-204ENST00000496104 RTCBQ9Y3I0 505 aaKnown RBP6.74□□□□□ -1.33
XPA-204ENST00000496104 SMG6Q86US8 1419 aaKnown RBP6.74□□□□□ -1.33
XPA-204ENST00000496104 SNED1Q8TER0 1413 aa6.74□□□□□ -1.33
XPA-204ENST00000496104 CNTNAP4Q9C0A0 1308 aa6.74□□□□□ -1.33
XPA-204ENST00000496104 H0YGN5 161 aa6.73□□□□□ -1.33
XPA-204ENST00000496104 ATP6V1AP38606 617 aa6.73□□□□□ -1.33
XPA-204ENST00000496104 PLA2G5P39877 138 aa6.73□□□□□ -1.33
XPA-204ENST00000496104 SRPK2P78362 688 aaKnown RBP6.73□□□□□ -1.33
XPA-204ENST00000496104 NME9Q86XW9 330 aa6.73□□□□□ -1.33
XPA-204ENST00000496104 USHBP1Q8N6Y0 703 aa6.73□□□□□ -1.33
XPA-204ENST00000496104 IP6K1Q92551 441 aa6.73□□□□□ -1.33
XPA-204ENST00000496104 LTV1Q96GA3 475 aaPredicted RBP6.73□□□□□ -1.33
XPA-204ENST00000496104 SLC6A16Q9GZN6 736 aa6.73□□□□□ -1.33
XPA-204ENST00000496104 ATP13A2Q9NQ11 1180 aa6.73□□□□□ -1.33
XPA-204ENST00000496104 ATG3Q9NT62 314 aa6.73□□□□□ -1.33
XPA-204ENST00000496104 MAP3K19Q56UN5 1328 aa6.73□□□□□ -1.33
XPA-204ENST00000496104 LOC105371045A0A1W2PR82 267 aa6.72□□□□□ -1.33
XPA-204ENST00000496104 APBB1O00213 710 aa6.72□□□□□ -1.33
XPA-204ENST00000496104 RPS6KA4O75676 772 aa6.72□□□□□ -1.33
XPA-204ENST00000496104 RC3H1Q5TC82 1133 aaKnown RBP6.72□□□□□ -1.33
XPA-204ENST00000496104 NBPF6Q5VWK0 638 aa6.72□□□□□ -1.33
XPA-204ENST00000496104 TTC13Q8NBP0 860 aa6.72□□□□□ -1.33
XPA-204ENST00000496104 TRIM47Q96LD4 638 aa6.72□□□□□ -1.33
XPA-204ENST00000496104 NBPF4Q96M43 638 aa6.72□□□□□ -1.33
XPA-204ENST00000496104 TAOK3Q9H2K8 898 aa6.72□□□□□ -1.33
XPA-204ENST00000496104 TRAK2O60296 914 aa6.71□□□□□ -1.34
XPA-204ENST00000496104 TRPA1O75762 1119 aa6.71□□□□□ -1.34
XPA-204ENST00000496104 SCNN1DP51172 638 aa6.71□□□□□ -1.34
XPA-204ENST00000496104 NFIXQ14938 502 aa6.71□□□□□ -1.34
XPA-204ENST00000496104 DLK2Q6UY11 383 aa6.71□□□□□ -1.34
XPA-204ENST00000496104 PNMA8AQ86V59 439 aaPredicted RBP6.71□□□□□ -1.34
XPA-204ENST00000496104 SNX27Q96L92 541 aa6.71□□□□□ -1.34
XPA-204ENST00000496104 AKAP11Q9UKA4 1901 aa6.71□□□□□ -1.34
XPA-204ENST00000496104 PCDH11XQ9BZA7 1347 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms