RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 NMRK2Q9NPI5 230 aa15.63■□□□□ 0.09
MRPL55-233ENST00000495899 PODXL2Q9NZ53 605 aa15.63■□□□□ 0.09
MRPL55-233ENST00000495899 NOB1Q9ULX3 412 aaKnown RBP15.63■□□□□ 0.09
MRPL55-233ENST00000495899 NSFL1CQ9UNZ2 370 aaKnown RBP15.63■□□□□ 0.09
MRPL55-233ENST00000495899 UTYO14607 1347 aa15.63■□□□□ 0.09
MRPL55-233ENST00000495899 VEGFAP15692 232 aaPredicted RBP15.62■□□□□ 0.09
MRPL55-233ENST00000495899 C1QTNF8P60827 252 aa15.62■□□□□ 0.09
MRPL55-233ENST00000495899 FOXO4P98177 505 aa15.62■□□□□ 0.09
MRPL55-233ENST00000495899 RRAGCQ9HB90 399 aa15.62■□□□□ 0.09
MRPL55-233ENST00000495899 BSDC1Q9NW68 430 aaPredicted RBP15.62■□□□□ 0.09
MRPL55-233ENST00000495899 CACNA1SQ13698 1873 aa15.62■□□□□ 0.09
MRPL55-233ENST00000495899 KIF16BQ96L93 1317 aa15.62■□□□□ 0.09
MRPL55-233ENST00000495899 IPO8O15397 1037 aaKnown RBP15.61■□□□□ 0.09
MRPL55-233ENST00000495899 PPIP5K2O43314 1243 aa15.61■□□□□ 0.09
MRPL55-233ENST00000495899 TOMM70O94826 608 aa15.61■□□□□ 0.09
MRPL55-233ENST00000495899 CCT4P50991 539 aaKnown RBP15.61■□□□□ 0.09
MRPL55-233ENST00000495899 GPSM2P81274 684 aa15.61■□□□□ 0.09
MRPL55-233ENST00000495899 KIAA2012Q0VF49 1180 aa15.61■□□□□ 0.09
MRPL55-233ENST00000495899 GSE1Q14687 1217 aa15.61■□□□□ 0.09
MRPL55-233ENST00000495899 DDNO94850 711 aaPredicted RBP15.6■□□□□ 0.09
MRPL55-233ENST00000495899 ITGA6P23229 1130 aa15.6■□□□□ 0.09
MRPL55-233ENST00000495899 AOC3Q16853 763 aa15.6■□□□□ 0.09
MRPL55-233ENST00000495899 WASHC4Q2M389 1173 aa15.6■□□□□ 0.09
MRPL55-233ENST00000495899 NIM1KQ8IY84 436 aa15.6■□□□□ 0.09
MRPL55-233ENST00000495899 GPC2Q8N158 579 aa15.6■□□□□ 0.09
MRPL55-233ENST00000495899 L3MBTL3Q96JM7 780 aaPredicted RBP15.6■□□□□ 0.09
MRPL55-233ENST00000495899 EYA3Q99504 573 aa15.6■□□□□ 0.09
MRPL55-233ENST00000495899 ZNRF3Q9ULT6 936 aa15.6■□□□□ 0.09
MRPL55-233ENST00000495899 ANKRD18BA2A2Z9 1011 aa15.59■□□□□ 0.09
MRPL55-233ENST00000495899 C6orf229H3BNL8 230 aa15.59■□□□□ 0.09
MRPL55-233ENST00000495899 NBPF7P0C2Y1 421 aaPredicted RBP15.59■□□□□ 0.09
MRPL55-233ENST00000495899 IGHMBP2P38935 993 aaKnown RBP15.59■□□□□ 0.09
MRPL55-233ENST00000495899 EIF6P56537 245 aaKnown RBP15.59■□□□□ 0.09
MRPL55-233ENST00000495899 IFIT5Q13325 482 aaKnown RBP15.59■□□□□ 0.09
MRPL55-233ENST00000495899 C16orf71Q8IYS4 520 aaPredicted RBP15.59■□□□□ 0.09
MRPL55-233ENST00000495899 TBC1D16Q8TBP0 767 aa15.59■□□□□ 0.09
MRPL55-233ENST00000495899 USP44Q9H0E7 712 aa15.59■□□□□ 0.09
MRPL55-233ENST00000495899 ANKIB1Q9P2G1 1089 aa15.59■□□□□ 0.09
MRPL55-233ENST00000495899 POLLQ9UGP5 575 aa15.59■□□□□ 0.09
MRPL55-233ENST00000495899 POTECB2RU33 542 aa15.58■□□□□ 0.08
MRPL55-233ENST00000495899 FAM161AQ3B820 660 aa15.58■□□□□ 0.08
MRPL55-233ENST00000495899 LMBR1LQ6UX01 489 aa15.58■□□□□ 0.08
MRPL55-233ENST00000495899 MPHOSPH8Q99549 860 aa15.58■□□□□ 0.08
MRPL55-233ENST00000495899 MINPP1Q9UNW1 487 aa15.58■□□□□ 0.08
MRPL55-233ENST00000495899 FARP1Q9Y4F1 1045 aaPredicted RBP15.58■□□□□ 0.08
MRPL55-233ENST00000495899 XDHP47989 1333 aa15.58■□□□□ 0.08
MRPL55-233ENST00000495899 ZNF541Q9H0D2 1346 aa15.58■□□□□ 0.08
MRPL55-233ENST00000495899 DICER1Q9UPY3 1922 aaKnown RBP15.58■□□□□ 0.08
MRPL55-233ENST00000495899 LRRC37AA6NMS7 1700 aa15.57■□□□□ 0.08
MRPL55-233ENST00000495899 TIAM2Q8IVF5 1701 aa15.57■□□□□ 0.08
MRPL55-233ENST00000495899 IQCA1LA6NCM1 817 aa15.57■□□□□ 0.08
MRPL55-233ENST00000495899 ATP2B4P23634 1241 aa15.57■□□□□ 0.08
MRPL55-233ENST00000495899 CCDC57Q2TAC2 916 aa15.57■□□□□ 0.08
MRPL55-233ENST00000495899 EPHA10Q5JZY3 1008 aa15.57■□□□□ 0.08
MRPL55-233ENST00000495899 PIP4P2Q8N4L2 257 aa15.57■□□□□ 0.08
MRPL55-233ENST00000495899 RBM46Q8TBY0 533 aaKnown RBP15.57■□□□□ 0.08
MRPL55-233ENST00000495899 KAZALD1Q96I82 304 aa15.57■□□□□ 0.08
MRPL55-233ENST00000495899 ZC3H12CQ9C0D7 883 aaKnown RBP15.57■□□□□ 0.08
MRPL55-233ENST00000495899 ANKRD2Q9GZV1 360 aa15.57■□□□□ 0.08
MRPL55-233ENST00000495899 GGA1Q9UJY5 639 aa15.57■□□□□ 0.08
MRPL55-233ENST00000495899 HDAC5Q9UQL6 1122 aa15.57■□□□□ 0.08
MRPL55-233ENST00000495899 BCAR3O75815 825 aa15.56■□□□□ 0.08
MRPL55-233ENST00000495899 DCAF8Q5TAQ9 597 aa15.56■□□□□ 0.08
MRPL55-233ENST00000495899 INTS3Q68E01 1043 aaKnown RBP15.56■□□□□ 0.08
MRPL55-233ENST00000495899 FAM212AQ96EL1 285 aa15.56■□□□□ 0.08
MRPL55-233ENST00000495899 SUCLG2Q96I99 432 aa15.56■□□□□ 0.08
MRPL55-233ENST00000495899 COL4A1P02462 1669 aa15.56■□□□□ 0.08
MRPL55-233ENST00000495899 CCDC88AQ3V6T2 1871 aa15.55■□□□□ 0.08
MRPL55-233ENST00000495899 UFL1O94874 794 aa15.55■□□□□ 0.08
MRPL55-233ENST00000495899 CXCL9Q07325 125 aa15.55■□□□□ 0.08
MRPL55-233ENST00000495899 TNIP1Q15025 636 aa15.55■□□□□ 0.08
MRPL55-233ENST00000495899 RABL6Q3YEC7 729 aaPredicted RBP15.55■□□□□ 0.08
MRPL55-233ENST00000495899 ATF7IPQ6VMQ6 1270 aa15.55■□□□□ 0.08
MRPL55-233ENST00000495899 LEMD3Q9Y2U8 911 aa15.55■□□□□ 0.08
MRPL55-233ENST00000495899 CHMP3Q9Y3E7 222 aa15.55■□□□□ 0.08
MRPL55-233ENST00000495899 TAF1P21675 1872 aa15.54■□□□□ 0.08
MRPL55-233ENST00000495899 COL4A5P29400 1685 aa15.54■□□□□ 0.08
MRPL55-233ENST00000495899 DUOX1Q9NRD9 1551 aa15.54■□□□□ 0.08
MRPL55-233ENST00000495899 FSTL1Q12841 308 aa15.54■□□□□ 0.08
MRPL55-233ENST00000495899 BICC1Q9H694 974 aaKnown RBP15.54■□□□□ 0.08
MRPL55-233ENST00000495899 GJA3Q9Y6H8 435 aa15.54■□□□□ 0.08
MRPL55-233ENST00000495899 WDR90Q96KV7 1748 aa15.54■□□□□ 0.08
MRPL55-233ENST00000495899 RIMBP2O15034 1052 aa15.53■□□□□ 0.08
MRPL55-233ENST00000495899 TRIM27P14373 513 aa15.53■□□□□ 0.08
MRPL55-233ENST00000495899 TAF7LQ5H9L4 462 aa15.53■□□□□ 0.08
MRPL55-233ENST00000495899 ZKSCAN2Q63HK3 967 aa15.53■□□□□ 0.08
MRPL55-233ENST00000495899 CIAPIN1Q6FI81 312 aa15.53■□□□□ 0.08
MRPL55-233ENST00000495899 LDHAL6AQ6ZMR3 332 aa15.53■□□□□ 0.08
MRPL55-233ENST00000495899 RASEFQ8IZ41 740 aa15.53■□□□□ 0.08
MRPL55-233ENST00000495899 FRAT1Q92837 279 aaPredicted RBP15.53■□□□□ 0.08
MRPL55-233ENST00000495899 HACL1Q9UJ83 578 aa15.53■□□□□ 0.08
MRPL55-233ENST00000495899 UBTFL1P0CB47 393 aaPredicted RBP15.52■□□□□ 0.08
MRPL55-233ENST00000495899 PRKCSHP14314 528 aaPredicted RBP15.52■□□□□ 0.08
MRPL55-233ENST00000495899 PNMA8AQ86V59 439 aaPredicted RBP15.52■□□□□ 0.08
MRPL55-233ENST00000495899 ANKRD44Q8N8A2 993 aa15.52■□□□□ 0.08
MRPL55-233ENST00000495899 SMC1BQ8NDV3 1235 aa15.52■□□□□ 0.08
MRPL55-233ENST00000495899 TAF1DQ9H5J8 278 aaPredicted RBP15.52■□□□□ 0.08
MRPL55-233ENST00000495899 LTBP1Q14766 1721 aa15.51■□□□□ 0.07
MRPL55-233ENST00000495899 MYH3P11055 1940 aa15.51■□□□□ 0.07
MRPL55-233ENST00000495899 YDJCA8MPS7 323 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms