RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 DCAF8Q5TAQ9 597 aa23.64■■□□□ 1.37
CLCNKA-207ENST00000495784 CST9Q5W186 159 aa23.64■■□□□ 1.37
CLCNKA-207ENST00000495784 TRPM4Q8TD43 1214 aa23.64■■□□□ 1.37
CLCNKA-207ENST00000495784 DPF2Q92785 391 aa23.64■■□□□ 1.37
CLCNKA-207ENST00000495784 GLIS2Q9BZE0 524 aaPredicted RBP23.64■■□□□ 1.37
CLCNKA-207ENST00000495784 PODXL2Q9NZ53 605 aa23.64■■□□□ 1.37
CLCNKA-207ENST00000495784 PGAP2Q9UHJ9 254 aa23.64■■□□□ 1.37
CLCNKA-207ENST00000495784 SHTN1A0MZ66 631 aa23.63■■□□□ 1.37
CLCNKA-207ENST00000495784 CAPN15O75808 1086 aa23.63■■□□□ 1.37
CLCNKA-207ENST00000495784 ECE1P42892 770 aa23.63■■□□□ 1.37
CLCNKA-207ENST00000495784 CTCFP49711 727 aaPredicted RBP23.63■■□□□ 1.37
CLCNKA-207ENST00000495784 HIRAP54198 1017 aaPredicted RBP23.63■■□□□ 1.37
CLCNKA-207ENST00000495784 ANKRD18AQ8IVF6 992 aa23.63■■□□□ 1.37
CLCNKA-207ENST00000495784 WBP1LQ9NX94 342 aa23.63■■□□□ 1.37
CLCNKA-207ENST00000495784 GGA1Q9UJY5 639 aa23.63■■□□□ 1.37
CLCNKA-207ENST00000495784 CELF2O95319 508 aaKnown RBP23.62■■□□□ 1.37
CLCNKA-207ENST00000495784 SLC4A2P04920 1241 aa23.62■■□□□ 1.37
CLCNKA-207ENST00000495784 IGKV5-2P06315 115 aa23.62■■□□□ 1.37
CLCNKA-207ENST00000495784 GRM1Q13255 1194 aa23.62■■□□□ 1.37
CLCNKA-207ENST00000495784 NCBP3Q53F19 620 aaKnown RBP23.62■■□□□ 1.37
CLCNKA-207ENST00000495784 CAPNS2Q96L46 248 aa23.62■■□□□ 1.37
CLCNKA-207ENST00000495784 ZNF316A6NFI3 1004 aaPredicted RBP23.61■■□□□ 1.37
CLCNKA-207ENST00000495784 RPS12P25398 132 aaKnown RBP23.61■■□□□ 1.37
CLCNKA-207ENST00000495784 CTSWP56202 376 aa23.61■■□□□ 1.37
CLCNKA-207ENST00000495784 MAP2K1Q02750 393 aaPredicted RBP23.61■■□□□ 1.37
CLCNKA-207ENST00000495784 CDC37L1Q7L3B6 337 aa23.61■■□□□ 1.37
CLCNKA-207ENST00000495784 TLL2Q9Y6L7 1015 aa23.61■■□□□ 1.37
CLCNKA-207ENST00000495784 CWF19L2Q2TBE0 894 aaKnown RBP23.6■■□□□ 1.37
CLCNKA-207ENST00000495784 G2E3Q7L622 706 aa23.6■■□□□ 1.37
CLCNKA-207ENST00000495784 SAMD7Q7Z3H4 446 aa23.6■■□□□ 1.37
CLCNKA-207ENST00000495784 CDC5LQ99459 802 aaKnown RBP23.6■■□□□ 1.37
CLCNKA-207ENST00000495784 ZNF408Q9H9D4 720 aa23.6■■□□□ 1.37
CLCNKA-207ENST00000495784 PRDM10Q9NQV6 1147 aa23.6■■□□□ 1.37
CLCNKA-207ENST00000495784 KCNQ5Q9NR82 932 aa23.6■■□□□ 1.37
CLCNKA-207ENST00000495784 SALL2Q9Y467 1007 aaPredicted RBP23.6■■□□□ 1.37
CLCNKA-207ENST00000495784 TRPM7Q96QT4 1865 aa23.6■■□□□ 1.37
CLCNKA-207ENST00000495784 NEURL1BA8MQ27 555 aa23.59■■□□□ 1.37
CLCNKA-207ENST00000495784 TBC1D10BQ4KMP7 808 aaPredicted RBP23.59■■□□□ 1.37
CLCNKA-207ENST00000495784 CYP4F22Q6NT55 531 aa23.59■■□□□ 1.37
CLCNKA-207ENST00000495784 RTL9Q8NET4 1388 aa23.59■■□□□ 1.37
CLCNKA-207ENST00000495784 XDHP47989 1333 aa23.59■■□□□ 1.37
CLCNKA-207ENST00000495784 FANCIQ9NVI1 1328 aa23.59■■□□□ 1.37
CLCNKA-207ENST00000495784 SAPCD2Q86UD0 394 aa23.57■■□□□ 1.36
CLCNKA-207ENST00000495784 TTLL11Q8NHH1 800 aa23.57■■□□□ 1.36
CLCNKA-207ENST00000495784 FLIIQ13045 1269 aa23.56■■□□□ 1.36
CLCNKA-207ENST00000495784 FKBP5Q13451 457 aaPredicted RBP23.56■■□□□ 1.36
CLCNKA-207ENST00000495784 RBM26Q5T8P6 1007 aaKnown RBP23.56■■□□□ 1.36
CLCNKA-207ENST00000495784 UBE3BQ7Z3V4 1068 aa23.56■■□□□ 1.36
CLCNKA-207ENST00000495784 USP48Q86UV5 1035 aa23.56■■□□□ 1.36
CLCNKA-207ENST00000495784 WDR63Q8IWG1 891 aa23.56■■□□□ 1.36
CLCNKA-207ENST00000495784 GREM2Q9H772 168 aa23.56■■□□□ 1.36
CLCNKA-207ENST00000495784 VIL1P09327 827 aaKnown RBP23.55■■□□□ 1.36
CLCNKA-207ENST00000495784 ATP2B4P23634 1241 aa23.55■■□□□ 1.36
CLCNKA-207ENST00000495784 LBX1P52954 281 aa23.55■■□□□ 1.36
CLCNKA-207ENST00000495784 BEGAINQ9BUH8 593 aa23.55■■□□□ 1.36
CLCNKA-207ENST00000495784 H7C1W4 665 aa23.54■■□□□ 1.36
CLCNKA-207ENST00000495784 EGFRP00533 1210 aa23.54■■□□□ 1.36
CLCNKA-207ENST00000495784 GCKRQ14397 625 aa23.53■■□□□ 1.36
CLCNKA-207ENST00000495784 KIF4BQ2VIQ3 1234 aa23.53■■□□□ 1.36
CLCNKA-207ENST00000495784 KRT26Q7Z3Y9 468 aa23.53■■□□□ 1.36
CLCNKA-207ENST00000495784 DNAAF4Q8WXU2 420 aa23.53■■□□□ 1.36
CLCNKA-207ENST00000495784 DCPSQ96C86 337 aaKnown RBP23.53■■□□□ 1.36
CLCNKA-207ENST00000495784 MYH16Q9H6N6 1097 aa23.53■■□□□ 1.36
CLCNKA-207ENST00000495784 BSDC1Q9NW68 430 aaPredicted RBP23.53■■□□□ 1.36
CLCNKA-207ENST00000495784 HSPA8P11142 646 aaKnown RBP23.52■■□□□ 1.36
CLCNKA-207ENST00000495784 HHIPL1Q96JK4 782 aa23.52■■□□□ 1.36
CLCNKA-207ENST00000495784 THSD7BQ9C0I4 1608 aa23.51■■□□□ 1.35
CLCNKA-207ENST00000495784 VAMP4O75379 141 aa23.51■■□□□ 1.35
CLCNKA-207ENST00000495784 MAP2K2P36507 400 aa23.51■■□□□ 1.35
CLCNKA-207ENST00000495784 EXOSC9Q06265 439 aaKnown RBP23.51■■□□□ 1.35
CLCNKA-207ENST00000495784 RSBN1LQ6PCB5 846 aaPredicted RBP23.51■■□□□ 1.35
CLCNKA-207ENST00000495784 MINPP1Q9UNW1 487 aa23.51■■□□□ 1.35
CLCNKA-207ENST00000495784 SCN9AQ15858 1988 aa23.51■■□□□ 1.35
CLCNKA-207ENST00000495784 AOC2O75106 756 aa23.5■■□□□ 1.35
CLCNKA-207ENST00000495784 IGHMBP2P38935 993 aaKnown RBP23.5■■□□□ 1.35
CLCNKA-207ENST00000495784 PODNQ7Z5L7 613 aa23.5■■□□□ 1.35
CLCNKA-207ENST00000495784 AGBL3Q8NEM8 1001 aa23.5■■□□□ 1.35
CLCNKA-207ENST00000495784 LINS1Q8NG48 757 aa23.5■■□□□ 1.35
CLCNKA-207ENST00000495784 DLK2Q6UY11 383 aa23.49■■□□□ 1.35
CLCNKA-207ENST00000495784 PLA2G12BQ9BX93 195 aa23.49■■□□□ 1.35
CLCNKA-207ENST00000495784 MED23Q9ULK4 1368 aa23.49■■□□□ 1.35
CLCNKA-207ENST00000495784 MYH3P11055 1940 aa23.49■■□□□ 1.35
CLCNKA-207ENST00000495784 USP17L3A6NCW0 530 aa23.48■■□□□ 1.35
CLCNKA-207ENST00000495784 USP17L4A6NCW7 530 aa23.48■■□□□ 1.35
CLCNKA-207ENST00000495784 ADM5C9JUS6 153 aa23.48■■□□□ 1.35
CLCNKA-207ENST00000495784 HUNKP57058 714 aa23.48■■□□□ 1.35
CLCNKA-207ENST00000495784 ZNF280AP59817 542 aaPredicted RBP23.48■■□□□ 1.35
CLCNKA-207ENST00000495784 USP17L1Q7RTZ2 530 aa23.48■■□□□ 1.35
CLCNKA-207ENST00000495784 SULF1Q8IWU6 871 aa23.48■■□□□ 1.35
CLCNKA-207ENST00000495784 FAM9BQ8IZU0 186 aa23.48■■□□□ 1.35
CLCNKA-207ENST00000495784 GGA3Q9NZ52 723 aa23.48■■□□□ 1.35
CLCNKA-207ENST00000495784 ZNF609O15014 1411 aa23.48■■□□□ 1.35
CLCNKA-207ENST00000495784 WTIPA6NIX2 430 aaPredicted RBP23.47■■□□□ 1.35
CLCNKA-207ENST00000495784 ITGA6P23229 1130 aa23.47■■□□□ 1.35
CLCNKA-207ENST00000495784 CCT4P50991 539 aaKnown RBP23.47■■□□□ 1.35
CLCNKA-207ENST00000495784 FAM161AQ3B820 660 aa23.47■■□□□ 1.35
CLCNKA-207ENST00000495784 MPHOSPH8Q99549 860 aa23.47■■□□□ 1.35
CLCNKA-207ENST00000495784 USP17L8P0C7I0 530 aa23.46■■□□□ 1.35
CLCNKA-207ENST00000495784 CASP7P55210 303 aa23.46■■□□□ 1.35
CLCNKA-207ENST00000495784 C2orf69Q8N8R5 385 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms