RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 NSUN5Q96P11 429 aaKnown RBP9.83□□□□□ -0.84
NCKAP1-208ENST00000495619 PLVAPQ9BX97 442 aa9.83□□□□□ -0.84
NCKAP1-208ENST00000495619 NEFLP07196 543 aa9.82□□□□□ -0.84
NCKAP1-208ENST00000495619 PDIA4P13667 645 aaKnown RBP9.82□□□□□ -0.84
NCKAP1-208ENST00000495619 HFE2Q6ZVN8 426 aa9.82□□□□□ -0.84
NCKAP1-208ENST00000495619 TTC9Q92623 222 aa9.82□□□□□ -0.84
NCKAP1-208ENST00000495619 PERM1Q5SV97 790 aa9.81□□□□□ -0.84
NCKAP1-208ENST00000495619 TRAPPC3LQ5T215 181 aa9.81□□□□□ -0.84
NCKAP1-208ENST00000495619 NCAPG2Q86XI2 1143 aa9.81□□□□□ -0.84
NCKAP1-208ENST00000495619 FZD6O60353 706 aa9.8□□□□□ -0.84
NCKAP1-208ENST00000495619 CES1P23141 567 aa9.8□□□□□ -0.84
NCKAP1-208ENST00000495619 TRIM28Q13263 835 aaKnown RBP9.8□□□□□ -0.84
NCKAP1-208ENST00000495619 PDE3BQ13370 1112 aa9.8□□□□□ -0.84
NCKAP1-208ENST00000495619 CACTIN-AS1Q8N1I8 211 aa9.8□□□□□ -0.84
NCKAP1-208ENST00000495619 CITED4Q96RK1 184 aa9.8□□□□□ -0.84
NCKAP1-208ENST00000495619 SMG9Q9H0W8 520 aaKnown RBP9.8□□□□□ -0.84
NCKAP1-208ENST00000495619 GGNBP2Q9H3C7 697 aa9.8□□□□□ -0.84
NCKAP1-208ENST00000495619 BIN2Q9UBW5 565 aaPredicted RBP9.8□□□□□ -0.84
NCKAP1-208ENST00000495619 NAGPAQ9UK23 515 aa9.8□□□□□ -0.84
NCKAP1-208ENST00000495619 FAM177BA6PVY3 158 aa9.79□□□□□ -0.84
NCKAP1-208ENST00000495619 J3QW42 95 aa9.79□□□□□ -0.84
NCKAP1-208ENST00000495619 RAC1P63000 192 aa9.79□□□□□ -0.84
NCKAP1-208ENST00000495619 C8orf86Q6ZUL3 223 aa9.79□□□□□ -0.84
NCKAP1-208ENST00000495619 PLD4Q96BZ4 506 aa9.79□□□□□ -0.84
NCKAP1-208ENST00000495619 DCAF5Q96JK2 942 aa9.79□□□□□ -0.84
NCKAP1-208ENST00000495619 LPIN3Q9BQK8 851 aa9.79□□□□□ -0.84
NCKAP1-208ENST00000495619 CCDC87Q9NVE4 849 aa9.79□□□□□ -0.84
NCKAP1-208ENST00000495619 TMEM63CQ9P1W3 806 aa9.79□□□□□ -0.84
NCKAP1-208ENST00000495619 SOWAHDA6NJG2 315 aa9.78□□□□□ -0.84
NCKAP1-208ENST00000495619 SMNDC1O75940 238 aaKnown RBP eCLIP9.78□□□□□ -0.84
NCKAP1-208ENST00000495619 SPATA31C1P0DKV0 1188 aa9.78□□□□□ -0.84
NCKAP1-208ENST00000495619 AFF1P51825 1210 aaKnown RBP9.78□□□□□ -0.84
NCKAP1-208ENST00000495619 TMC1Q8TDI8 760 aa9.78□□□□□ -0.84
NCKAP1-208ENST00000495619 SNX29Q8TEQ0 813 aa9.78□□□□□ -0.84
NCKAP1-208ENST00000495619 TRIM11Q96F44 468 aa9.78□□□□□ -0.84
NCKAP1-208ENST00000495619 SUV39H2Q9H5I1 410 aa9.78□□□□□ -0.84
NCKAP1-208ENST00000495619 PHACTR2O75167 634 aa9.77□□□□□ -0.85
NCKAP1-208ENST00000495619 NID1P14543 1247 aa9.77□□□□□ -0.85
NCKAP1-208ENST00000495619 WFDC8Q8IUA0 241 aa9.77□□□□□ -0.85
NCKAP1-208ENST00000495619 GJD3Q8N144 294 aa9.77□□□□□ -0.85
NCKAP1-208ENST00000495619 GSK3AP49840 483 aa9.76□□□□□ -0.85
NCKAP1-208ENST00000495619 MSL1Q68DK7 614 aa9.76□□□□□ -0.85
NCKAP1-208ENST00000495619 A6NHS1 94 aa9.75□□□□□ -0.85
NCKAP1-208ENST00000495619 TNFRSF21O75509 655 aa9.75□□□□□ -0.85
NCKAP1-208ENST00000495619 KIF4AO95239 1232 aa9.75□□□□□ -0.85
NCKAP1-208ENST00000495619 APBA3O96018 575 aa9.75□□□□□ -0.85
NCKAP1-208ENST00000495619 ARHGAP4P98171 946 aa9.75□□□□□ -0.85
NCKAP1-208ENST00000495619 C1orf127Q8N9H9 656 aa9.75□□□□□ -0.85
NCKAP1-208ENST00000495619 DCAF11Q8TEB1 546 aa9.75□□□□□ -0.85
NCKAP1-208ENST00000495619 NACC1Q96RE7 527 aa9.75□□□□□ -0.85
NCKAP1-208ENST00000495619 MUC3BQ9H195 1237 aa9.75□□□□□ -0.85
NCKAP1-208ENST00000495619 CNTN3Q9P232 1028 aa9.75□□□□□ -0.85
NCKAP1-208ENST00000495619 EDN3P14138 238 aa9.74□□□□□ -0.85
NCKAP1-208ENST00000495619 COL8A1P27658 744 aa9.74□□□□□ -0.85
NCKAP1-208ENST00000495619 DTWD1Q8N5C7 304 aa9.74□□□□□ -0.85
NCKAP1-208ENST00000495619 KCTD17Q8N5Z5 321 aa9.74□□□□□ -0.85
NCKAP1-208ENST00000495619 IVNS1ABPQ9Y6Y0 642 aa9.74□□□□□ -0.85
NCKAP1-208ENST00000495619 IGHA1P01876 353 aa9.73□□□□□ -0.85
NCKAP1-208ENST00000495619 CYP2E1P05181 493 aaPredicted RBP9.73□□□□□ -0.85
NCKAP1-208ENST00000495619 COL9A3Q14050 684 aaPredicted RBP9.73□□□□□ -0.85
NCKAP1-208ENST00000495619 CEP135Q66GS9 1140 aa9.73□□□□□ -0.85
NCKAP1-208ENST00000495619 GDF6Q6KF10 455 aaPredicted RBP9.73□□□□□ -0.85
NCKAP1-208ENST00000495619 DMRTC2Q8IXT2 367 aaPredicted RBP9.73□□□□□ -0.85
NCKAP1-208ENST00000495619 DMRTB1Q96MA1 342 aa9.72□□□□□ -0.85
NCKAP1-208ENST00000495619 PBX4Q9BYU1 374 aa9.72□□□□□ -0.85
NCKAP1-208ENST00000495619 KANSL3Q9P2N6 904 aa9.72□□□□□ -0.85
NCKAP1-208ENST00000495619 AMOTL2Q9Y2J4 779 aa9.72□□□□□ -0.85
NCKAP1-208ENST00000495619 ECM1Q16610 540 aa9.71□□□□□ -0.86
NCKAP1-208ENST00000495619 COL13A1Q5TAT6 717 aaPredicted RBP9.71□□□□□ -0.86
NCKAP1-208ENST00000495619 IL22RA1Q8N6P7 574 aa9.71□□□□□ -0.86
NCKAP1-208ENST00000495619 SALL4Q9UJQ4 1053 aa9.71□□□□□ -0.86
NCKAP1-208ENST00000495619 A0A0A0MRY4 1105 aa9.7□□□□□ -0.86
NCKAP1-208ENST00000495619 ELNP15502 786 aa9.7□□□□□ -0.86
NCKAP1-208ENST00000495619 GRIK5Q16478 980 aa9.7□□□□□ -0.86
NCKAP1-208ENST00000495619 AEBP1Q8IUX7 1158 aa9.7□□□□□ -0.86
NCKAP1-208ENST00000495619 MAP4K3Q8IVH8 894 aa9.7□□□□□ -0.86
NCKAP1-208ENST00000495619 CEP120Q8N960 986 aa9.7□□□□□ -0.86
NCKAP1-208ENST00000495619 RASSF4Q9H2L5 321 aa9.7□□□□□ -0.86
NCKAP1-208ENST00000495619 SRA1Q9HD15 236 aaKnown RBP9.7□□□□□ -0.86
NCKAP1-208ENST00000495619 DCTN4Q9UJW0 460 aa9.7□□□□□ -0.86
NCKAP1-208ENST00000495619 KRBA1A5PL33 1030 aa9.69□□□□□ -0.86
NCKAP1-208ENST00000495619 PTPRAP18433 802 aa9.69□□□□□ -0.86
NCKAP1-208ENST00000495619 FAM117BQ6P1L5 589 aa9.69□□□□□ -0.86
NCKAP1-208ENST00000495619 RBCK1Q9BYM8 510 aa9.69□□□□□ -0.86
NCKAP1-208ENST00000495619 CHRDQ9H2X0 955 aa9.69□□□□□ -0.86
NCKAP1-208ENST00000495619 ZFYVE28Q9HCC9 887 aa9.69□□□□□ -0.86
NCKAP1-208ENST00000495619 FOXD3Q9UJU5 478 aaPredicted RBP9.69□□□□□ -0.86
NCKAP1-208ENST00000495619 PPME1Q9Y570 386 aa9.69□□□□□ -0.86
NCKAP1-208ENST00000495619 EREGO14944 169 aa9.68□□□□□ -0.86
NCKAP1-208ENST00000495619 CDC27P30260 824 aa9.68□□□□□ -0.86
NCKAP1-208ENST00000495619 CABP4P57796 275 aa9.68□□□□□ -0.86
NCKAP1-208ENST00000495619 ATP11AP98196 1134 aa9.68□□□□□ -0.86
NCKAP1-208ENST00000495619 PLA2G4EQ3MJ16 856 aa9.68□□□□□ -0.86
NCKAP1-208ENST00000495619 GPAT2Q6NUI2 795 aa9.68□□□□□ -0.86
NCKAP1-208ENST00000495619 FAM129BQ96TA1 746 aa9.68□□□□□ -0.86
NCKAP1-208ENST00000495619 TRIM33Q9UPN9 1127 aa9.68□□□□□ -0.86
NCKAP1-208ENST00000495619 C9orf172C9J069 976 aa9.67□□□□□ -0.86
NCKAP1-208ENST00000495619 FAM229AH3BQW9 127 aa9.67□□□□□ -0.86
NCKAP1-208ENST00000495619 MSTNO14793 375 aa9.67□□□□□ -0.86
NCKAP1-208ENST00000495619 MAPK1P28482 360 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms