RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 CAPN12Q6ZSI9 719 aa9.17□□□□□ -0.94
SRRM1-219ENST00000495561 RBSNQ9H1K0 784 aa9.17□□□□□ -0.94
SRRM1-219ENST00000495561 AKTIPQ9H8T0 292 aa9.17□□□□□ -0.94
SRRM1-219ENST00000495561 ALX3O95076 343 aa9.16□□□□□ -0.94
SRRM1-219ENST00000495561 PRR23CQ6ZRP0 262 aa9.16□□□□□ -0.94
SRRM1-219ENST00000495561 MKNK1Q9BUB5 465 aa9.16□□□□□ -0.94
SRRM1-219ENST00000495561 MRPL18Q9H0U6 180 aaKnown RBP9.16□□□□□ -0.94
SRRM1-219ENST00000495561 TRIM33Q9UPN9 1127 aa9.16□□□□□ -0.94
SRRM1-219ENST00000495561 SRPK2P78362 688 aaKnown RBP9.15□□□□□ -0.94
SRRM1-219ENST00000495561 SETDB1Q15047 1291 aa9.15□□□□□ -0.94
SRRM1-219ENST00000495561 DZIP1LQ8IYY4 767 aaKnown RBP9.15□□□□□ -0.94
SRRM1-219ENST00000495561 KRTAP9-2Q9BYQ4 174 aa9.15□□□□□ -0.94
SRRM1-219ENST00000495561 SRA1Q9HD15 236 aaKnown RBP9.15□□□□□ -0.94
SRRM1-219ENST00000495561 CXXC1Q9P0U4 656 aaPredicted RBP9.15□□□□□ -0.94
SRRM1-219ENST00000495561 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.14□□□□□ -0.95
SRRM1-219ENST00000495561 UBAP1LF5GYI3 381 aa9.14□□□□□ -0.95
SRRM1-219ENST00000495561 F8W735 103 aaPredicted RBP9.14□□□□□ -0.95
SRRM1-219ENST00000495561 TMEM130Q8N3G9 435 aa9.14□□□□□ -0.95
SRRM1-219ENST00000495561 OR13H1Q8NG92 308 aa9.14□□□□□ -0.95
SRRM1-219ENST00000495561 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.13□□□□□ -0.95
SRRM1-219ENST00000495561 NAA30Q147X3 362 aaPredicted RBP9.13□□□□□ -0.95
SRRM1-219ENST00000495561 COL13A1Q5TAT6 717 aaPredicted RBP9.13□□□□□ -0.95
SRRM1-219ENST00000495561 MAP4K3Q8IVH8 894 aa9.13□□□□□ -0.95
SRRM1-219ENST00000495561 PIK3R5Q8WYR1 880 aa9.13□□□□□ -0.95
SRRM1-219ENST00000495561 RNF112Q9ULX5 631 aa9.13□□□□□ -0.95
SRRM1-219ENST00000495561 TMEM164Q5U3C3 297 aa9.12□□□□□ -0.95
SRRM1-219ENST00000495561 FAM13BQ9NYF5 915 aa9.12□□□□□ -0.95
SRRM1-219ENST00000495561 ATG7O95352 703 aa9.11□□□□□ -0.95
SRRM1-219ENST00000495561 ZAP70P43403 619 aa9.11□□□□□ -0.95
SRRM1-219ENST00000495561 ATP11AP98196 1134 aa9.11□□□□□ -0.95
SRRM1-219ENST00000495561 Q6ZS46 218 aa9.11□□□□□ -0.95
SRRM1-219ENST00000495561 CACTIN-AS1Q8N1I8 211 aa9.11□□□□□ -0.95
SRRM1-219ENST00000495561 DCAF11Q8TEB1 546 aa9.11□□□□□ -0.95
SRRM1-219ENST00000495561 PPME1Q9Y570 386 aa9.11□□□□□ -0.95
SRRM1-219ENST00000495561 KRTAP9-6A0A140TA67 174 aa9.1□□□□□ -0.95
SRRM1-219ENST00000495561 PTCD1O75127 700 aaKnown RBP9.1□□□□□ -0.95
SRRM1-219ENST00000495561 HYAL2Q12891 473 aa9.1□□□□□ -0.95
SRRM1-219ENST00000495561 AGGF1Q8N302 714 aaeCLIP9.1□□□□□ -0.95
SRRM1-219ENST00000495561 MUC3BQ9H195 1237 aa9.1□□□□□ -0.95
SRRM1-219ENST00000495561 FSTP19883 344 aa9.09□□□□□ -0.95
SRRM1-219ENST00000495561 GALNT11Q8NCW6 608 aa9.09□□□□□ -0.95
SRRM1-219ENST00000495561 GPR152Q8TDT2 470 aa9.09□□□□□ -0.95
SRRM1-219ENST00000495561 LINC01387J3KSC0 135 aa9.08□□□□□ -0.96
SRRM1-219ENST00000495561 ZBTB39O15060 712 aa9.08□□□□□ -0.96
SRRM1-219ENST00000495561 CEP135Q66GS9 1140 aa9.08□□□□□ -0.96
SRRM1-219ENST00000495561 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.08□□□□□ -0.96
SRRM1-219ENST00000495561 CLP1Q92989 425 aaKnown RBP9.08□□□□□ -0.96
SRRM1-219ENST00000495561 STIM2Q9P246 746 aa9.08□□□□□ -0.96
SRRM1-219ENST00000495561 FNDC3AQ9Y2H6 1198 aaKnown RBP9.08□□□□□ -0.96
SRRM1-219ENST00000495561 GLB1P16278 677 aa9.07□□□□□ -0.96
SRRM1-219ENST00000495561 TTC39BQ5VTQ0 682 aaPredicted RBP9.07□□□□□ -0.96
SRRM1-219ENST00000495561 SPACA7Q96KW9 195 aa9.07□□□□□ -0.96
SRRM1-219ENST00000495561 LACRTQ9GZZ8 138 aa9.07□□□□□ -0.96
SRRM1-219ENST00000495561 SMNDC1O75940 238 aaKnown RBP eCLIP9.06□□□□□ -0.96
SRRM1-219ENST00000495561 WISP1O95388 367 aa9.06□□□□□ -0.96
SRRM1-219ENST00000495561 SCNN1AP37088 669 aa9.06□□□□□ -0.96
SRRM1-219ENST00000495561 TXNDC11Q6PKC3 985 aa9.06□□□□□ -0.96
SRRM1-219ENST00000495561 ADAMTSL4Q6UY14 1074 aa9.06□□□□□ -0.96
SRRM1-219ENST00000495561 RASSF4Q9H2L5 321 aa9.06□□□□□ -0.96
SRRM1-219ENST00000495561 SLAIN2Q9P270 581 aa9.06□□□□□ -0.96
SRRM1-219ENST00000495561 KIF4AO95239 1232 aa9.05□□□□□ -0.96
SRRM1-219ENST00000495561 CYP2E1P05181 493 aaPredicted RBP9.05□□□□□ -0.96
SRRM1-219ENST00000495561 CDC27P30260 824 aa9.05□□□□□ -0.96
SRRM1-219ENST00000495561 SLC51AQ86UW1 340 aa9.05□□□□□ -0.96
SRRM1-219ENST00000495561 ABTB2Q8N961 1025 aa9.05□□□□□ -0.96
SRRM1-219ENST00000495561 ABI2Q9NYB9 513 aaPredicted RBP9.05□□□□□ -0.96
SRRM1-219ENST00000495561 TM4SF5O14894 197 aa9.04□□□□□ -0.96
SRRM1-219ENST00000495561 CD68P34810 354 aaPredicted RBP9.04□□□□□ -0.96
SRRM1-219ENST00000495561 UBL7Q96S82 380 aaPredicted RBP9.04□□□□□ -0.96
SRRM1-219ENST00000495561 KCNK4Q9NYG8 393 aa9.04□□□□□ -0.96
SRRM1-219ENST00000495561 CDC25BP30305 580 aa9.03□□□□□ -0.96
SRRM1-219ENST00000495561 CARD10Q9BWT7 1032 aa9.03□□□□□ -0.96
SRRM1-219ENST00000495561 PBX4Q9BYU1 374 aa9.03□□□□□ -0.96
SRRM1-219ENST00000495561 RAXQ9Y2V3 346 aa9.03□□□□□ -0.96
SRRM1-219ENST00000495561 ACAD11Q709F0 780 aa9.02□□□□□ -0.97
SRRM1-219ENST00000495561 CEP120Q8N960 986 aa9.02□□□□□ -0.97
SRRM1-219ENST00000495561 ELP3Q9H9T3 547 aa9.02□□□□□ -0.97
SRRM1-219ENST00000495561 TMEM63CQ9P1W3 806 aa9.02□□□□□ -0.97
SRRM1-219ENST00000495561 SEPT3Q9UH03 358 aa9.02□□□□□ -0.97
SRRM1-219ENST00000495561 FSCN2O14926 492 aa9.01□□□□□ -0.97
SRRM1-219ENST00000495561 EPHA1P21709 976 aa9.01□□□□□ -0.97
SRRM1-219ENST00000495561 ATP2B4P23634 1241 aa9.01□□□□□ -0.97
SRRM1-219ENST00000495561 PDE12Q6L8Q7 609 aaKnown RBP9.01□□□□□ -0.97
SRRM1-219ENST00000495561 NCAPG2Q86XI2 1143 aa9.01□□□□□ -0.97
SRRM1-219ENST00000495561 PBXIP1Q96AQ6 731 aa9.01□□□□□ -0.97
SRRM1-219ENST00000495561 NUDT16Q96DE0 195 aaKnown RBP9.01□□□□□ -0.97
SRRM1-219ENST00000495561 SH2B1Q9NRF2 756 aaPredicted RBP9.01□□□□□ -0.97
SRRM1-219ENST00000495561 PCMTD2Q9NV79 361 aa9.01□□□□□ -0.97
SRRM1-219ENST00000495561 SSTR4P31391 388 aa9□□□□□ -0.97
SRRM1-219ENST00000495561 ATCAYQ86WG3 371 aa9□□□□□ -0.97
SRRM1-219ENST00000495561 ARMC10Q8N2F6 343 aa9□□□□□ -0.97
SRRM1-219ENST00000495561 IGLV1-40P01703 118 aa8.99□□□□□ -0.97
SRRM1-219ENST00000495561 PTPRAP18433 802 aa8.99□□□□□ -0.97
SRRM1-219ENST00000495561 FAM117BQ6P1L5 589 aa8.99□□□□□ -0.97
SRRM1-219ENST00000495561 KIAA1211Q6ZU35 1233 aa8.99□□□□□ -0.97
SRRM1-219ENST00000495561 KLHL23Q8NBE8 558 aa8.99□□□□□ -0.97
SRRM1-219ENST00000495561 POP1Q99575 1024 aaKnown RBP8.99□□□□□ -0.97
SRRM1-219ENST00000495561 CEP41Q9BYV8 373 aa8.99□□□□□ -0.97
SRRM1-219ENST00000495561 CNTN3Q9P232 1028 aa8.99□□□□□ -0.97
SRRM1-219ENST00000495561 KANSL3Q9P2N6 904 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms