RNA–Protein interactions for RNA: ENST00000495540.1

PROM2-210, Transcript of prominin 2, humanhuman

TSL 3

Gene PROM2, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-210ENST00000495540 TBC1D2BQ9UPU7 963 aa17.25■□□□□ 0.35
PROM2-210ENST00000495540 ZNF831Q5JPB2 1677 aa17.24■□□□□ 0.35
PROM2-210ENST00000495540 BRD1O95696 1058 aa17.24■□□□□ 0.35
PROM2-210ENST00000495540 ANKRD1Q15327 319 aa17.24■□□□□ 0.35
PROM2-210ENST00000495540 TTC39AQ5SRH9 613 aa17.24■□□□□ 0.35
PROM2-210ENST00000495540 DDX46Q7L014 1031 aaKnown RBP17.24■□□□□ 0.35
PROM2-210ENST00000495540 ZDHHC9Q9Y397 364 aa17.24■□□□□ 0.35
PROM2-210ENST00000495540 RPAP1Q9BWH6 1393 aaPredicted RBP17.24■□□□□ 0.35
PROM2-210ENST00000495540 GOLIM4O00461 696 aa17.23■□□□□ 0.35
PROM2-210ENST00000495540 ITGA6P23229 1130 aa17.23■□□□□ 0.35
PROM2-210ENST00000495540 HSPA1LP34931 641 aa17.23■□□□□ 0.35
PROM2-210ENST00000495540 ADCK5Q3MIX3 580 aa17.23■□□□□ 0.35
PROM2-210ENST00000495540 ZNF589Q86UQ0 364 aaPredicted RBP17.23■□□□□ 0.35
PROM2-210ENST00000495540 XAGE2Q96GT9 111 aa17.23■□□□□ 0.35
PROM2-210ENST00000495540 ISY1Q9ULR0 285 aaKnown RBP17.23■□□□□ 0.35
PROM2-210ENST00000495540 RIPOR2Q9Y4F9 1068 aa17.23■□□□□ 0.35
PROM2-210ENST00000495540 RNF113AO15541 343 aaKnown RBP17.22■□□□□ 0.35
PROM2-210ENST00000495540 METTL24Q5JXM2 366 aa17.22■□□□□ 0.35
PROM2-210ENST00000495540 ZMYM1Q5SVZ6 1142 aa17.22■□□□□ 0.35
PROM2-210ENST00000495540 MCTP1Q6DN14 999 aa17.22■□□□□ 0.35
PROM2-210ENST00000495540 BLOC1S2Q6QNY1 142 aa17.22■□□□□ 0.35
PROM2-210ENST00000495540 LDHAL6AQ6ZMR3 332 aa17.22■□□□□ 0.35
PROM2-210ENST00000495540 NGLY1Q96IV0 654 aa17.22■□□□□ 0.35
PROM2-210ENST00000495540 WDR33Q9C0J8 1336 aaKnown RBP17.21■□□□□ 0.35
PROM2-210ENST00000495540 ZFYP08048 801 aaPredicted RBP17.21■□□□□ 0.35
PROM2-210ENST00000495540 ITPK1Q13572 414 aa17.21■□□□□ 0.35
PROM2-210ENST00000495540 PKP1Q13835 747 aa17.21■□□□□ 0.35
PROM2-210ENST00000495540 ATP2B3Q16720 1220 aa17.21■□□□□ 0.35
PROM2-210ENST00000495540 SYNE4Q8N205 404 aa17.21■□□□□ 0.35
PROM2-210ENST00000495540 CCDC85AQ96PX6 553 aaPredicted RBP17.21■□□□□ 0.35
PROM2-210ENST00000495540 DSCC1Q9BVC3 393 aa17.21■□□□□ 0.35
PROM2-210ENST00000495540 UTP14AQ9BVJ6 771 aaKnown RBP17.21■□□□□ 0.35
PROM2-210ENST00000495540 GREM2Q9H772 168 aa17.21■□□□□ 0.35
PROM2-210ENST00000495540 CNNM1Q9NRU3 951 aa17.21■□□□□ 0.35
PROM2-210ENST00000495540 UBN2Q6ZU65 1347 aa17.21■□□□□ 0.34
PROM2-210ENST00000495540 GOLGA6L3A6NEY3 463 aa17.2■□□□□ 0.34
PROM2-210ENST00000495540 RGL2O15211 777 aa17.2■□□□□ 0.34
PROM2-210ENST00000495540 CAMTA2O94983 1202 aa17.2■□□□□ 0.34
PROM2-210ENST00000495540 PDIA4P13667 645 aaKnown RBP17.2■□□□□ 0.34
PROM2-210ENST00000495540 RPS6KB1P23443 525 aa17.2■□□□□ 0.34
PROM2-210ENST00000495540 KLHL40Q2TBA0 621 aa17.2■□□□□ 0.34
PROM2-210ENST00000495540 ZNF512BQ96KM6 892 aaPredicted RBP17.2■□□□□ 0.34
PROM2-210ENST00000495540 SMC3Q9UQE7 1217 aa17.2■□□□□ 0.34
PROM2-210ENST00000495540 ZNF652Q9Y2D9 606 aa17.2■□□□□ 0.34
PROM2-210ENST00000495540 NDUFB9Q9Y6M9 179 aa17.2■□□□□ 0.34
PROM2-210ENST00000495540 RIC1Q4ADV7 1423 aa17.2■□□□□ 0.34
PROM2-210ENST00000495540 CPA1P15085 419 aa17.19■□□□□ 0.34
PROM2-210ENST00000495540 FAM98CQ17RN3 349 aaKnown RBP17.19■□□□□ 0.34
PROM2-210ENST00000495540 SUSD4Q5VX71 490 aa17.19■□□□□ 0.34
PROM2-210ENST00000495540 FNBP4Q8N3X1 1017 aaPredicted RBP17.19■□□□□ 0.34
PROM2-210ENST00000495540 C8orf37Q96NL8 207 aa17.19■□□□□ 0.34
PROM2-210ENST00000495540 GZF1Q9H116 711 aaPredicted RBP17.19■□□□□ 0.34
PROM2-210ENST00000495540 LMBRD1Q9NUN5 540 aa17.19■□□□□ 0.34
PROM2-210ENST00000495540 SPATA31A6Q5VVP1 1343 aa17.19■□□□□ 0.34
PROM2-210ENST00000495540 COL5A3P25940 1745 aaPredicted RBP17.18■□□□□ 0.34
PROM2-210ENST00000495540 BCL9LQ86UU0 1499 aa17.18■□□□□ 0.34
PROM2-210ENST00000495540 ADORA1P30542 326 aa17.18■□□□□ 0.34
PROM2-210ENST00000495540 DDX49Q9Y6V7 483 aaKnown RBP17.18■□□□□ 0.34
PROM2-210ENST00000495540 MROH5Q6ZUA9 1318 aa17.18■□□□□ 0.34
PROM2-210ENST00000495540 FSD2A1L4K1 749 aa17.17■□□□□ 0.34
PROM2-210ENST00000495540 ZSCAN25Q6NSZ9 544 aa17.17■□□□□ 0.34
PROM2-210ENST00000495540 CLEC4GQ6UXB4 293 aa17.17■□□□□ 0.34
PROM2-210ENST00000495540 CCDC129Q6ZRS4 1044 aa17.17■□□□□ 0.34
PROM2-210ENST00000495540 NEK1Q96PY6 1258 aa17.17■□□□□ 0.34
PROM2-210ENST00000495540 SEC62Q99442 399 aaKnown RBP17.17■□□□□ 0.34
PROM2-210ENST00000495540 RTL9Q8NET4 1388 aa17.16■□□□□ 0.34
PROM2-210ENST00000495540 LAMB2P55268 1798 aa17.16■□□□□ 0.34
PROM2-210ENST00000495540 PDE8BO95263 885 aa17.16■□□□□ 0.34
PROM2-210ENST00000495540 HMGB1P09429 215 aaKnown RBP17.16■□□□□ 0.34
PROM2-210ENST00000495540 UQCRFS1P1P0C7P4 283 aa17.16■□□□□ 0.34
PROM2-210ENST00000495540 FKBP4Q02790 459 aaKnown RBP eCLIP17.16■□□□□ 0.34
PROM2-210ENST00000495540 LRP5O75197 1615 aa17.16■□□□□ 0.34
PROM2-210ENST00000495540 MYH14Q7Z406 1995 aaKnown RBP17.16■□□□□ 0.34
PROM2-210ENST00000495540 BCORQ6W2J9 1755 aa17.15■□□□□ 0.34
PROM2-210ENST00000495540 KCNQ2O43526 872 aa17.15■□□□□ 0.34
PROM2-210ENST00000495540 TTF1Q15361 905 aaPredicted RBP17.15■□□□□ 0.34
PROM2-210ENST00000495540 CCDC152Q4G0S7 254 aa17.15■□□□□ 0.34
PROM2-210ENST00000495540 CCDC83Q8IWF9 413 aa17.15■□□□□ 0.34
PROM2-210ENST00000495540 VGLL2Q8N8G2 317 aa17.15■□□□□ 0.34
PROM2-210ENST00000495540 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.15■□□□□ 0.34
PROM2-210ENST00000495540 NIP7Q9Y221 180 aaKnown RBP eCLIP17.15■□□□□ 0.34
PROM2-210ENST00000495540 CNTNAP4Q9C0A0 1308 aa17.15■□□□□ 0.34
PROM2-210ENST00000495540 LARGE1O95461 756 aa17.14■□□□□ 0.33
PROM2-210ENST00000495540 NTSR2O95665 410 aa17.14■□□□□ 0.33
PROM2-210ENST00000495540 PUM3Q15397 648 aaKnown RBP17.14■□□□□ 0.33
PROM2-210ENST00000495540 ME3Q16798 604 aa17.14■□□□□ 0.33
PROM2-210ENST00000495540 RC3H1Q5TC82 1133 aaKnown RBP17.14■□□□□ 0.33
PROM2-210ENST00000495540 LPIN2Q92539 896 aa17.14■□□□□ 0.33
PROM2-210ENST00000495540 CTNNA3Q9UI47 895 aa17.14■□□□□ 0.33
PROM2-210ENST00000495540 ATP6V1DQ9Y5K8 247 aa17.14■□□□□ 0.33
PROM2-210ENST00000495540 MAST3O60307 1309 aa17.14■□□□□ 0.33
PROM2-210ENST00000495540 STX6O43752 255 aa17.13■□□□□ 0.33
PROM2-210ENST00000495540 PRPF40AO75400 957 aaKnown RBP17.13■□□□□ 0.33
PROM2-210ENST00000495540 MBD3O95983 291 aa17.13■□□□□ 0.33
PROM2-210ENST00000495540 ZSCAN22P10073 491 aaPredicted RBP17.13■□□□□ 0.33
PROM2-210ENST00000495540 SLC5A1P13866 664 aa17.13■□□□□ 0.33
PROM2-210ENST00000495540 HCLS1P14317 486 aaPredicted RBP17.13■□□□□ 0.33
PROM2-210ENST00000495540 ZAP70P43403 619 aa17.13■□□□□ 0.33
PROM2-210ENST00000495540 MRE11P49959 708 aa17.13■□□□□ 0.33
PROM2-210ENST00000495540 FOXD4L5Q5VV16 416 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms