RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 NUDCQ9Y266 331 aa14.98□□□□□ -0.01
HLA-DOA-206ENST00000495532 POTEFA5A3E0 1075 aa14.97□□□□□ -0.01
HLA-DOA-206ENST00000495532 VIL1P09327 827 aaKnown RBP14.97□□□□□ -0.01
HLA-DOA-206ENST00000495532 TM4SF4P48230 202 aa14.97□□□□□ -0.01
HLA-DOA-206ENST00000495532 CFHR5Q9BXR6 569 aa14.97□□□□□ -0.01
HLA-DOA-206ENST00000495532 SH3TC1Q8TE82 1336 aa14.96□□□□□ -0.01
HLA-DOA-206ENST00000495532 ZNF280AP59817 542 aaPredicted RBP14.96□□□□□ -0.01
HLA-DOA-206ENST00000495532 GPSM2P81274 684 aa14.96□□□□□ -0.01
HLA-DOA-206ENST00000495532 SCARF1Q14162 830 aa14.96□□□□□ -0.01
HLA-DOA-206ENST00000495532 PROSER3Q2NL68 480 aa14.96□□□□□ -0.01
HLA-DOA-206ENST00000495532 CELF1Q92879 486 aaKnown RBP14.96□□□□□ -0.01
HLA-DOA-206ENST00000495532 R3HDMLQ9H3Y0 253 aa14.96□□□□□ -0.01
HLA-DOA-206ENST00000495532 SZT2Q5T011 3432 aa14.96□□□□□ -0.01
HLA-DOA-206ENST00000495532 TRIOBPQ9H2D6 2365 aa14.95□□□□□ -0.02
HLA-DOA-206ENST00000495532 UBE2Q2LH0YL09 131 aa14.95□□□□□ -0.02
HLA-DOA-206ENST00000495532 C6orf229H3BNL8 230 aa14.95□□□□□ -0.02
HLA-DOA-206ENST00000495532 FKTNO75072 461 aa14.95□□□□□ -0.02
HLA-DOA-206ENST00000495532 ANXA1P04083 346 aa14.95□□□□□ -0.02
HLA-DOA-206ENST00000495532 TRMT112Q9UI30 125 aaKnown RBP14.95□□□□□ -0.02
HLA-DOA-206ENST00000495532 CEP290O15078 2479 aa14.95□□□□□ -0.02
HLA-DOA-206ENST00000495532 PITPNM2Q9BZ72 1349 aa14.94□□□□□ -0.02
HLA-DOA-206ENST00000495532 LAMB1P07942 1786 aa14.94□□□□□ -0.02
HLA-DOA-206ENST00000495532 HSP90AB3PQ58FF7 597 aa14.94□□□□□ -0.02
HLA-DOA-206ENST00000495532 EYA3Q99504 573 aa14.94□□□□□ -0.02
HLA-DOA-206ENST00000495532 TBC1D16Q8TBP0 767 aa14.93□□□□□ -0.02
HLA-DOA-206ENST00000495532 SCAF8Q9UPN6 1271 aaKnown RBP14.93□□□□□ -0.02
HLA-DOA-206ENST00000495532 ZNF646O15015 1829 aaPredicted RBP14.93□□□□□ -0.02
HLA-DOA-206ENST00000495532 MKRN3Q13064 507 aaKnown RBP14.92□□□□□ -0.02
HLA-DOA-206ENST00000495532 TCIRG1Q13488 830 aa14.92□□□□□ -0.02
HLA-DOA-206ENST00000495532 INTS3Q68E01 1043 aaKnown RBP14.92□□□□□ -0.02
HLA-DOA-206ENST00000495532 RSBN1LQ6PCB5 846 aaPredicted RBP14.92□□□□□ -0.02
HLA-DOA-206ENST00000495532 AGBL3Q8NEM8 1001 aa14.92□□□□□ -0.02
HLA-DOA-206ENST00000495532 EIF2S2P20042 333 aaKnown RBP14.91□□□□□ -0.02
HLA-DOA-206ENST00000495532 SREBF2Q12772 1141 aa14.91□□□□□ -0.02
HLA-DOA-206ENST00000495532 SF3B3Q15393 1217 aaKnown RBP14.91□□□□□ -0.02
HLA-DOA-206ENST00000495532 PRAMEF18Q5VWM3 479 aa14.91□□□□□ -0.02
HLA-DOA-206ENST00000495532 COPS6Q7L5N1 327 aa14.91□□□□□ -0.02
HLA-DOA-206ENST00000495532 ZNF428Q96B54 188 aa14.91□□□□□ -0.02
HLA-DOA-206ENST00000495532 GMLQ99445 158 aa14.91□□□□□ -0.02
HLA-DOA-206ENST00000495532 MYOZ2Q9NPC6 264 aa14.91□□□□□ -0.02
HLA-DOA-206ENST00000495532 OTOP1Q7RTM1 612 aa14.9□□□□□ -0.02
HLA-DOA-206ENST00000495532 XAGE3Q8WTP9 111 aa14.9□□□□□ -0.02
HLA-DOA-206ENST00000495532 COLQQ9Y215 455 aaPredicted RBP14.9□□□□□ -0.02
HLA-DOA-206ENST00000495532 TRIM17Q9Y577 477 aa14.9□□□□□ -0.02
HLA-DOA-206ENST00000495532 USP17L8P0C7I0 530 aa14.89□□□□□ -0.03
HLA-DOA-206ENST00000495532 PPP2R1AP30153 589 aa14.89□□□□□ -0.03
HLA-DOA-206ENST00000495532 AIMP1Q12904 312 aaKnown RBP14.89□□□□□ -0.03
HLA-DOA-206ENST00000495532 NECTIN2Q92692 538 aa14.89□□□□□ -0.03
HLA-DOA-206ENST00000495532 ZC3H12CQ9C0D7 883 aaKnown RBP14.89□□□□□ -0.03
HLA-DOA-206ENST00000495532 PODXL2Q9NZ53 605 aa14.89□□□□□ -0.03
HLA-DOA-206ENST00000495532 EN2P19622 333 aaPredicted RBP14.88□□□□□ -0.03
HLA-DOA-206ENST00000495532 TTLL12Q14166 644 aaPredicted RBP14.88□□□□□ -0.03
HLA-DOA-206ENST00000495532 UFL1O94874 794 aa14.87□□□□□ -0.03
HLA-DOA-206ENST00000495532 PTPN12Q05209 780 aaKnown RBP14.87□□□□□ -0.03
HLA-DOA-206ENST00000495532 NBPF9Q3BBW0 867 aa14.87□□□□□ -0.03
HLA-DOA-206ENST00000495532 ARMC5Q96C12 935 aa14.87□□□□□ -0.03
HLA-DOA-206ENST00000495532 FAM89AQ96GI7 184 aa14.87□□□□□ -0.03
HLA-DOA-206ENST00000495532 PLEKHF1Q96S99 279 aa14.87□□□□□ -0.03
HLA-DOA-206ENST00000495532 TSPYL4Q9UJ04 414 aa14.87□□□□□ -0.03
HLA-DOA-206ENST00000495532 ALDH1A1P00352 501 aa14.86□□□□□ -0.03
HLA-DOA-206ENST00000495532 RPS8P62241 208 aaKnown RBP14.86□□□□□ -0.03
HLA-DOA-206ENST00000495532 TRIM26Q12899 539 aaPredicted RBP14.86□□□□□ -0.03
HLA-DOA-206ENST00000495532 NFE2L2Q16236 605 aa14.86□□□□□ -0.03
HLA-DOA-206ENST00000495532 SPRYD7Q5W111 196 aa14.86□□□□□ -0.03
HLA-DOA-206ENST00000495532 PTPN22Q9Y2R2 807 aa14.86□□□□□ -0.03
HLA-DOA-206ENST00000495532 G3V3G9 751 aa14.85□□□□□ -0.03
HLA-DOA-206ENST00000495532 DCAF8Q5TAQ9 597 aa14.85□□□□□ -0.03
HLA-DOA-206ENST00000495532 ISCA1Q9BUE6 129 aa14.85□□□□□ -0.03
HLA-DOA-206ENST00000495532 NEFMP07197 916 aa14.84□□□□□ -0.03
HLA-DOA-206ENST00000495532 NF2P35240 595 aa14.84□□□□□ -0.03
HLA-DOA-206ENST00000495532 LDLRAD1Q5T700 205 aa14.84□□□□□ -0.03
HLA-DOA-206ENST00000495532 IFNL1Q8IU54 200 aa14.84□□□□□ -0.03
HLA-DOA-206ENST00000495532 PCGF6Q9BYE7 350 aa14.84□□□□□ -0.03
HLA-DOA-206ENST00000495532 ANKIB1Q9P2G1 1089 aa14.84□□□□□ -0.03
HLA-DOA-206ENST00000495532 GGA1Q9UJY5 639 aa14.84□□□□□ -0.03
HLA-DOA-206ENST00000495532 RANBP2P49792 3224 aaKnown RBP14.84□□□□□ -0.03
HLA-DOA-206ENST00000495532 USP17L3A6NCW0 530 aa14.83□□□□□ -0.04
HLA-DOA-206ENST00000495532 USP17L4A6NCW7 530 aa14.83□□□□□ -0.04
HLA-DOA-206ENST00000495532 IGF2BP3O00425 579 aaKnown RBP eCLIP14.83□□□□□ -0.04
HLA-DOA-206ENST00000495532 WNT10BO00744 389 aa14.83□□□□□ -0.04
HLA-DOA-206ENST00000495532 USP17L1Q7RTZ2 530 aa14.83□□□□□ -0.04
HLA-DOA-206ENST00000495532 ARMC9Q7Z3E5 817 aa14.83□□□□□ -0.04
HLA-DOA-206ENST00000495532 OTUD5Q96G74 571 aa14.83□□□□□ -0.04
HLA-DOA-206ENST00000495532 SEC31BQ9NQW1 1179 aa14.83□□□□□ -0.04
HLA-DOA-206ENST00000495532 CUL9Q8IWT3 2517 aa14.83□□□□□ -0.04
HLA-DOA-206ENST00000495532 ATP5J2-PTCD1G3V325 749 aa14.82□□□□□ -0.04
HLA-DOA-206ENST00000495532 IRS4O14654 1257 aaPredicted RBP14.82□□□□□ -0.04
HLA-DOA-206ENST00000495532 CAP1Q01518 475 aa14.82□□□□□ -0.04
HLA-DOA-206ENST00000495532 PRKG1Q13976 671 aa14.82□□□□□ -0.04
HLA-DOA-206ENST00000495532 RTL5Q5HYW3 569 aaPredicted RBP14.82□□□□□ -0.04
HLA-DOA-206ENST00000495532 PLBD2Q8NHP8 589 aa14.82□□□□□ -0.04
HLA-DOA-206ENST00000495532 CD99L2Q8TCZ2 262 aa14.82□□□□□ -0.04
HLA-DOA-206ENST00000495532 ERO1AQ96HE7 468 aa14.82□□□□□ -0.04
HLA-DOA-206ENST00000495532 MANSC4A6NHS7 340 aaPredicted RBP14.81□□□□□ -0.04
HLA-DOA-206ENST00000495532 DLL1O00548 723 aa14.81□□□□□ -0.04
HLA-DOA-206ENST00000495532 INHBEP58166 350 aa14.81□□□□□ -0.04
HLA-DOA-206ENST00000495532 PODNQ7Z5L7 613 aa14.81□□□□□ -0.04
HLA-DOA-206ENST00000495532 MXD3Q9BW11 206 aa14.81□□□□□ -0.04
HLA-DOA-206ENST00000495532 FZD1Q9UP38 647 aa14.81□□□□□ -0.04
HLA-DOA-206ENST00000495532 H0YGN5 161 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms