RNA–Protein interactions for RNA: ENST00000495044.5

CCDC30-211, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 2,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-211ENST00000495044 PDIA6Q15084 440 aa9.63□□□□□ -0.87
CCDC30-211ENST00000495044 DCAF8Q5TAQ9 597 aa9.63□□□□□ -0.87
CCDC30-211ENST00000495044 COPS6Q7L5N1 327 aa9.63□□□□□ -0.87
CCDC30-211ENST00000495044 LRP10Q7Z4F1 713 aa9.63□□□□□ -0.87
CCDC30-211ENST00000495044 XAGE3Q8WTP9 111 aa9.63□□□□□ -0.87
CCDC30-211ENST00000495044 NECTIN2Q92692 538 aa9.63□□□□□ -0.87
CCDC30-211ENST00000495044 TCIRG1Q13488 830 aa9.62□□□□□ -0.87
CCDC30-211ENST00000495044 DOK7Q18PE1 504 aa9.62□□□□□ -0.87
CCDC30-211ENST00000495044 CDCA5Q96FF9 252 aa9.62□□□□□ -0.87
CCDC30-211ENST00000495044 CSRNP1Q96S65 589 aa9.62□□□□□ -0.87
CCDC30-211ENST00000495044 HDAC9Q9UKV0 1011 aa9.62□□□□□ -0.87
CCDC30-211ENST00000495044 ZNF428Q96B54 188 aa9.61□□□□□ -0.87
CCDC30-211ENST00000495044 PLEKHF1Q96S99 279 aa9.61□□□□□ -0.87
CCDC30-211ENST00000495044 HPS5Q9UPZ3 1129 aa9.61□□□□□ -0.87
CCDC30-211ENST00000495044 RTL9Q8NET4 1388 aa9.61□□□□□ -0.87
CCDC30-211ENST00000495044 GPSM2P81274 684 aa9.61□□□□□ -0.87
CCDC30-211ENST00000495044 PKN2Q16513 984 aaKnown RBP9.61□□□□□ -0.87
CCDC30-211ENST00000495044 RASAL3Q86YV0 1011 aa9.61□□□□□ -0.87
CCDC30-211ENST00000495044 CELF1Q92879 486 aaKnown RBP9.61□□□□□ -0.87
CCDC30-211ENST00000495044 POLLQ9UGP5 575 aa9.61□□□□□ -0.87
CCDC30-211ENST00000495044 NCBP3Q53F19 620 aaKnown RBP9.6□□□□□ -0.87
CCDC30-211ENST00000495044 ZC3H12CQ9C0D7 883 aaKnown RBP9.6□□□□□ -0.87
CCDC30-211ENST00000495044 SCN9AQ15858 1988 aa9.6□□□□□ -0.87
CCDC30-211ENST00000495044 PSME4Q14997 1843 aa9.6□□□□□ -0.87
CCDC30-211ENST00000495044 FKBP1BP68106 108 aa9.6□□□□□ -0.87
CCDC30-211ENST00000495044 ANGEL2Q5VTE6 544 aaKnown RBP9.6□□□□□ -0.87
CCDC30-211ENST00000495044 KCNQ5Q9NR82 932 aa9.6□□□□□ -0.87
CCDC30-211ENST00000495044 BABAM1Q9NWV8 329 aa9.6□□□□□ -0.87
CCDC30-211ENST00000495044 ASTN2O75129 1339 aaPredicted RBP9.59□□□□□ -0.87
CCDC30-211ENST00000495044 LMOD3Q0VAK6 560 aa9.59□□□□□ -0.87
CCDC30-211ENST00000495044 TBC1D16Q8TBP0 767 aa9.59□□□□□ -0.87
CCDC30-211ENST00000495044 FAM89AQ96GI7 184 aa9.59□□□□□ -0.87
CCDC30-211ENST00000495044 ANKIB1Q9P2G1 1089 aa9.59□□□□□ -0.87
CCDC30-211ENST00000495044 U3KPZ7 1027 aaPredicted RBP9.59□□□□□ -0.87
CCDC30-211ENST00000495044 COL4A1P02462 1669 aa9.59□□□□□ -0.87
CCDC30-211ENST00000495044 UFL1O94874 794 aa9.58□□□□□ -0.88
CCDC30-211ENST00000495044 VIL1P09327 827 aaKnown RBP9.58□□□□□ -0.88
CCDC30-211ENST00000495044 RIPK4P57078 832 aa9.58□□□□□ -0.88
CCDC30-211ENST00000495044 SCARF1Q14162 830 aa9.58□□□□□ -0.88
CCDC30-211ENST00000495044 SF3B3Q15393 1217 aaKnown RBP9.58□□□□□ -0.88
CCDC30-211ENST00000495044 GCC1Q96CN9 775 aa9.58□□□□□ -0.88
CCDC30-211ENST00000495044 TTLL12Q14166 644 aaPredicted RBP9.58□□□□□ -0.88
CCDC30-211ENST00000495044 RTL5Q5HYW3 569 aaPredicted RBP9.58□□□□□ -0.88
CCDC30-211ENST00000495044 AGBL3Q8NEM8 1001 aa9.58□□□□□ -0.88
CCDC30-211ENST00000495044 PLBD2Q8NHP8 589 aa9.58□□□□□ -0.88
CCDC30-211ENST00000495044 ZNF296Q8WUU4 475 aaPredicted RBP9.58□□□□□ -0.88
CCDC30-211ENST00000495044 CHPF2Q9P2E5 772 aa9.58□□□□□ -0.88
CCDC30-211ENST00000495044 GGA1Q9UJY5 639 aa9.58□□□□□ -0.88
CCDC30-211ENST00000495044 PITPNM2Q9BZ72 1349 aa9.57□□□□□ -0.88
CCDC30-211ENST00000495044 ZNF609O15014 1411 aa9.57□□□□□ -0.88
CCDC30-211ENST00000495044 ATP5J2-PTCD1G3V325 749 aa9.57□□□□□ -0.88
CCDC30-211ENST00000495044 TBC1D8O95759 1140 aa9.57□□□□□ -0.88
CCDC30-211ENST00000495044 RPS8P62241 208 aaKnown RBP9.57□□□□□ -0.88
CCDC30-211ENST00000495044 RSBN1LQ6PCB5 846 aaPredicted RBP9.57□□□□□ -0.88
CCDC30-211ENST00000495044 IRS4O14654 1257 aaPredicted RBP9.56□□□□□ -0.88
CCDC30-211ENST00000495044 USP17L8P0C7I0 530 aa9.56□□□□□ -0.88
CCDC30-211ENST00000495044 ZNF280AP59817 542 aaPredicted RBP9.56□□□□□ -0.88
CCDC30-211ENST00000495044 HDGFL1Q5TGJ6 251 aa9.56□□□□□ -0.88
CCDC30-211ENST00000495044 ANKRD13DQ6ZTN6 518 aa9.56□□□□□ -0.88
CCDC30-211ENST00000495044 MYOZ2Q9NPC6 264 aa9.56□□□□□ -0.88
CCDC30-211ENST00000495044 HSP90B1P14625 803 aaKnown RBP9.56□□□□□ -0.88
CCDC30-211ENST00000495044 NF2P35240 595 aa9.56□□□□□ -0.88
CCDC30-211ENST00000495044 SREBF2Q12772 1141 aa9.56□□□□□ -0.88
CCDC30-211ENST00000495044 FBXO46Q6PJ61 603 aaPredicted RBP9.56□□□□□ -0.88
CCDC30-211ENST00000495044 ISCA1Q9BUE6 129 aa9.56□□□□□ -0.88
CCDC30-211ENST00000495044 PODXL2Q9NZ53 605 aa9.56□□□□□ -0.88
CCDC30-211ENST00000495044 LAS1LQ9Y4W2 734 aaKnown RBP9.56□□□□□ -0.88
CCDC30-211ENST00000495044 UBE2Q2LH0YL09 131 aa9.55□□□□□ -0.88
CCDC30-211ENST00000495044 GPR25O00155 361 aa9.55□□□□□ -0.88
CCDC30-211ENST00000495044 MKRN3Q13064 507 aaKnown RBP9.55□□□□□ -0.88
CCDC30-211ENST00000495044 MOB2Q70IA6 237 aa9.55□□□□□ -0.88
CCDC30-211ENST00000495044 DBF4Q9UBU7 674 aaPredicted RBP9.55□□□□□ -0.88
CCDC30-211ENST00000495044 SPEF2Q9C093 1822 aa9.55□□□□□ -0.88
CCDC30-211ENST00000495044 KRT24Q2M2I5 525 aa9.55□□□□□ -0.88
CCDC30-211ENST00000495044 SCAF8Q9UPN6 1271 aaKnown RBP9.55□□□□□ -0.88
CCDC30-211ENST00000495044 USP17L3A6NCW0 530 aa9.54□□□□□ -0.88
CCDC30-211ENST00000495044 USP17L4A6NCW7 530 aa9.54□□□□□ -0.88
CCDC30-211ENST00000495044 FKTNO75072 461 aa9.54□□□□□ -0.88
CCDC30-211ENST00000495044 TMPOP42166 694 aaKnown RBP9.54□□□□□ -0.88
CCDC30-211ENST00000495044 CCDC152Q4G0S7 254 aa9.54□□□□□ -0.88
CCDC30-211ENST00000495044 NOM1Q5C9Z4 860 aaKnown RBP9.54□□□□□ -0.88
CCDC30-211ENST00000495044 USP17L1Q7RTZ2 530 aa9.54□□□□□ -0.88
CCDC30-211ENST00000495044 SEC31BQ9NQW1 1179 aa9.54□□□□□ -0.88
CCDC30-211ENST00000495044 XDHP47989 1333 aa9.54□□□□□ -0.88
CCDC30-211ENST00000495044 HOXB7P09629 217 aa9.53□□□□□ -0.88
CCDC30-211ENST00000495044 PRKCSHP14314 528 aaPredicted RBP9.53□□□□□ -0.88
CCDC30-211ENST00000495044 TM4SF4P48230 202 aa9.53□□□□□ -0.88
CCDC30-211ENST00000495044 GOLGA2Q08379 1002 aa9.53□□□□□ -0.88
CCDC30-211ENST00000495044 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
CCDC30-211ENST00000495044 OGFOD1Q8N543 542 aa9.53□□□□□ -0.88
CCDC30-211ENST00000495044 ZBTB38Q8NAP3 1195 aaPredicted RBP9.53□□□□□ -0.88
CCDC30-211ENST00000495044 FBXW7Q969H0 707 aa9.53□□□□□ -0.88
CCDC30-211ENST00000495044 HYPKQ9NX55 129 aa9.53□□□□□ -0.88
CCDC30-211ENST00000495044 PRAMEF18Q5VWM3 479 aa9.53□□□□□ -0.88
CCDC30-211ENST00000495044 RIC3Q7Z5B4 369 aa9.53□□□□□ -0.88
CCDC30-211ENST00000495044 PODNQ7Z5L7 613 aa9.53□□□□□ -0.88
CCDC30-211ENST00000495044 CHL1O00533 1208 aa9.52□□□□□ -0.89
CCDC30-211ENST00000495044 ATP2B4P23634 1241 aa9.52□□□□□ -0.89
CCDC30-211ENST00000495044 NBPF9Q3BBW0 867 aa9.52□□□□□ -0.89
CCDC30-211ENST00000495044 ARMC9Q7Z3E5 817 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms