RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 CDC37L1Q7L3B6 337 aa28.49■■■□□ 2.15
HDDC3-203ENST00000494993 SAPCD2Q86UD0 394 aa28.49■■■□□ 2.15
HDDC3-203ENST00000494993 GPR101Q96P66 508 aaPredicted RBP28.49■■■□□ 2.15
HDDC3-203ENST00000494993 PODXL2Q9NZ53 605 aa28.49■■■□□ 2.15
HDDC3-203ENST00000494993 SPEF2Q9C093 1822 aa28.48■■■□□ 2.15
HDDC3-203ENST00000494993 PDE8AO60658 829 aa28.48■■■□□ 2.15
HDDC3-203ENST00000494993 DOK7Q18PE1 504 aa28.48■■■□□ 2.15
HDDC3-203ENST00000494993 CCDC152Q4G0S7 254 aa28.48■■■□□ 2.15
HDDC3-203ENST00000494993 TSPYL6Q8N831 410 aa28.48■■■□□ 2.15
HDDC3-203ENST00000494993 RTL9Q8NET4 1388 aa28.48■■■□□ 2.15
HDDC3-203ENST00000494993 RPS12P25398 132 aaKnown RBP28.46■■■□□ 2.15
HDDC3-203ENST00000494993 SAMD7Q7Z3H4 446 aa28.46■■■□□ 2.15
HDDC3-203ENST00000494993 JARID2Q92833 1246 aaPredicted RBP28.46■■■□□ 2.15
HDDC3-203ENST00000494993 ZC3H12CQ9C0D7 883 aaKnown RBP28.46■■■□□ 2.15
HDDC3-203ENST00000494993 ZNF408Q9H9D4 720 aa28.46■■■□□ 2.15
HDDC3-203ENST00000494993 KCNQ5Q9NR82 932 aa28.46■■■□□ 2.15
HDDC3-203ENST00000494993 CACNA1FO60840 1977 aa28.45■■■□□ 2.14
HDDC3-203ENST00000494993 HHIPL1Q96JK4 782 aa28.45■■■□□ 2.14
HDDC3-203ENST00000494993 MAP3K2Q9Y2U5 619 aa28.45■■■□□ 2.14
HDDC3-203ENST00000494993 UFL1O94874 794 aa28.44■■■□□ 2.14
HDDC3-203ENST00000494993 CCDC184Q52MB2 194 aa28.44■■■□□ 2.14
HDDC3-203ENST00000494993 TSR2Q969E8 191 aaKnown RBP28.44■■■□□ 2.14
HDDC3-203ENST00000494993 BEGAINQ9BUH8 593 aa28.44■■■□□ 2.14
HDDC3-203ENST00000494993 ANKIB1Q9P2G1 1089 aa28.44■■■□□ 2.14
HDDC3-203ENST00000494993 AOC2O75106 756 aa28.43■■■□□ 2.14
HDDC3-203ENST00000494993 MAP2K2P36507 400 aa28.43■■■□□ 2.14
HDDC3-203ENST00000494993 TBC1D10BQ4KMP7 808 aaPredicted RBP28.43■■■□□ 2.14
HDDC3-203ENST00000494993 CCDC85AQ96PX6 553 aaPredicted RBP28.43■■■□□ 2.14
HDDC3-203ENST00000494993 GGA1Q9UJY5 639 aa28.43■■■□□ 2.14
HDDC3-203ENST00000494993 EGFRP00533 1210 aa28.42■■■□□ 2.14
HDDC3-203ENST00000494993 CCDC27Q2M243 656 aa28.42■■■□□ 2.14
HDDC3-203ENST00000494993 KSR2Q6VAB6 950 aa28.42■■■□□ 2.14
HDDC3-203ENST00000494993 USP48Q86UV5 1035 aa28.42■■■□□ 2.14
HDDC3-203ENST00000494993 PI4KAP2A4QPH2 592 aa28.4■■■□□ 2.14
HDDC3-203ENST00000494993 G3V3G9 751 aa28.4■■■□□ 2.14
HDDC3-203ENST00000494993 IGKV5-2P06315 115 aa28.4■■■□□ 2.14
HDDC3-203ENST00000494993 VIL1P09327 827 aaKnown RBP28.4■■■□□ 2.14
HDDC3-203ENST00000494993 DCAF8Q5TAQ9 597 aa28.4■■■□□ 2.14
HDDC3-203ENST00000494993 ANKRD18AQ8IVF6 992 aa28.4■■■□□ 2.14
HDDC3-203ENST00000494993 PI4KAP1Q8N8J0 262 aa28.4■■■□□ 2.14
HDDC3-203ENST00000494993 STK31Q9BXU1 1019 aa28.4■■■□□ 2.14
HDDC3-203ENST00000494993 WWC1Q8IX03 1113 aa28.39■■■□□ 2.14
HDDC3-203ENST00000494993 XDHP47989 1333 aa28.39■■■□□ 2.13
HDDC3-203ENST00000494993 CTSWP56202 376 aa28.38■■■□□ 2.13
HDDC3-203ENST00000494993 RBM26Q5T8P6 1007 aaKnown RBP28.38■■■□□ 2.13
HDDC3-203ENST00000494993 KRT26Q7Z3Y9 468 aa28.38■■■□□ 2.13
HDDC3-203ENST00000494993 ZNF609O15014 1411 aa28.37■■■□□ 2.13
HDDC3-203ENST00000494993 NEXNQ0ZGT2 675 aa28.37■■■□□ 2.13
HDDC3-203ENST00000494993 KIF4BQ2VIQ3 1234 aa28.37■■■□□ 2.13
HDDC3-203ENST00000494993 TWISTNBQ3B726 338 aaPredicted RBP28.37■■■□□ 2.13
HDDC3-203ENST00000494993 DLK2Q6UY11 383 aa28.37■■■□□ 2.13
HDDC3-203ENST00000494993 DCPSQ96C86 337 aaKnown RBP28.36■■■□□ 2.13
HDDC3-203ENST00000494993 CDC5LQ99459 802 aaKnown RBP28.36■■■□□ 2.13
HDDC3-203ENST00000494993 CASP8AP2Q9UKL3 1982 aa28.35■■■□□ 2.13
HDDC3-203ENST00000494993 IL16Q14005 1332 aa28.35■■■□□ 2.13
HDDC3-203ENST00000494993 ZNF646O15015 1829 aaPredicted RBP28.34■■■□□ 2.13
HDDC3-203ENST00000494993 ATP2B4P23634 1241 aa28.34■■■□□ 2.13
HDDC3-203ENST00000494993 BRPF1P55201 1214 aaPredicted RBP28.34■■■□□ 2.13
HDDC3-203ENST00000494993 HUNKP57058 714 aa28.34■■■□□ 2.13
HDDC3-203ENST00000494993 CWF19L2Q2TBE0 894 aaKnown RBP28.34■■■□□ 2.13
HDDC3-203ENST00000494993 G2E3Q7L622 706 aa28.34■■■□□ 2.13
HDDC3-203ENST00000494993 TTLL11Q8NHH1 800 aa28.34■■■□□ 2.13
HDDC3-203ENST00000494993 NEURL1BA8MQ27 555 aa28.33■■■□□ 2.13
HDDC3-203ENST00000494993 ADM5C9JUS6 153 aa28.33■■■□□ 2.13
HDDC3-203ENST00000494993 RSBN1LQ6PCB5 846 aaPredicted RBP28.33■■■□□ 2.13
HDDC3-203ENST00000494993 AGBL3Q8NEM8 1001 aa28.33■■■□□ 2.13
HDDC3-203ENST00000494993 TSKSQ9UJT2 592 aa28.33■■■□□ 2.13
HDDC3-203ENST00000494993 CA12O43570 354 aa28.32■■■□□ 2.12
HDDC3-203ENST00000494993 SLC4A2P04920 1241 aa28.32■■■□□ 2.12
HDDC3-203ENST00000494993 GREM2Q9H772 168 aa28.32■■■□□ 2.12
HDDC3-203ENST00000494993 GBA2Q9HCG7 927 aaPredicted RBP28.32■■■□□ 2.12
HDDC3-203ENST00000494993 GGA3Q9NZ52 723 aa28.32■■■□□ 2.12
HDDC3-203ENST00000494993 NOGQ13253 232 aa28.31■■■□□ 2.12
HDDC3-203ENST00000494993 NCBP3Q53F19 620 aaKnown RBP28.31■■■□□ 2.12
HDDC3-203ENST00000494993 ABHD8Q96I13 439 aa28.31■■■□□ 2.12
HDDC3-203ENST00000494993 BSDC1Q9NW68 430 aaPredicted RBP28.31■■■□□ 2.12
HDDC3-203ENST00000494993 ZNF280AP59817 542 aaPredicted RBP28.3■■■□□ 2.12
HDDC3-203ENST00000494993 MINPP1Q9UNW1 487 aa28.3■■■□□ 2.12
HDDC3-203ENST00000494993 MED23Q9ULK4 1368 aa28.29■■■□□ 2.12
HDDC3-203ENST00000494993 ASTN2O75129 1339 aaPredicted RBP28.29■■■□□ 2.12
HDDC3-203ENST00000494993 H7C1W4 665 aa28.29■■■□□ 2.12
HDDC3-203ENST00000494993 UBE3BQ7Z3V4 1068 aa28.29■■■□□ 2.12
HDDC3-203ENST00000494993 PODNQ7Z5L7 613 aa28.29■■■□□ 2.12
HDDC3-203ENST00000494993 SULF1Q8IWU6 871 aa28.29■■■□□ 2.12
HDDC3-203ENST00000494993 C2orf69Q8N8R5 385 aa28.29■■■□□ 2.12
HDDC3-203ENST00000494993 AKAP11Q9UKA4 1901 aa28.29■■■□□ 2.12
HDDC3-203ENST00000494993 FLIIQ13045 1269 aa28.28■■■□□ 2.12
HDDC3-203ENST00000494993 RGMBQ6NW40 437 aa28.28■■■□□ 2.12
HDDC3-203ENST00000494993 GMLQ99445 158 aa28.28■■■□□ 2.12
HDDC3-203ENST00000494993 USP17L3A6NCW0 530 aa28.27■■■□□ 2.12
HDDC3-203ENST00000494993 USP17L4A6NCW7 530 aa28.27■■■□□ 2.12
HDDC3-203ENST00000494993 WTIPA6NIX2 430 aaPredicted RBP28.27■■■□□ 2.12
HDDC3-203ENST00000494993 USP17L1Q7RTZ2 530 aa28.27■■■□□ 2.12
HDDC3-203ENST00000494993 ZIC5Q96T25 663 aa28.27■■■□□ 2.12
HDDC3-203ENST00000494993 MRS2Q9HD23 443 aa28.27■■■□□ 2.12
HDDC3-203ENST00000494993 FANCIQ9NVI1 1328 aa28.26■■■□□ 2.11
HDDC3-203ENST00000494993 USP17L8P0C7I0 530 aa28.25■■■□□ 2.11
HDDC3-203ENST00000494993 CCT4P50991 539 aaKnown RBP28.25■■■□□ 2.11
HDDC3-203ENST00000494993 SCARF1Q14162 830 aa28.25■■■□□ 2.11
HDDC3-203ENST00000494993 GCKRQ14397 625 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms