RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 EGFRP00533 1210 aa14.98□□□□□ -0.01
VTI1A-208ENST00000494728 DOK7Q18PE1 504 aa14.98□□□□□ -0.01
VTI1A-208ENST00000494728 WASHC4Q2M389 1173 aa14.98□□□□□ -0.01
VTI1A-208ENST00000494728 ECE2O60344 883 aa14.97□□□□□ -0.01
VTI1A-208ENST00000494728 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
VTI1A-208ENST00000494728 CTSWP56202 376 aa14.97□□□□□ -0.01
VTI1A-208ENST00000494728 CCDC152Q4G0S7 254 aa14.97□□□□□ -0.01
VTI1A-208ENST00000494728 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
VTI1A-208ENST00000494728 CST9Q5W186 159 aa14.97□□□□□ -0.01
VTI1A-208ENST00000494728 STK31Q9BXU1 1019 aa14.97□□□□□ -0.01
VTI1A-208ENST00000494728 GLIS2Q9BZE0 524 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-208ENST00000494728 PODXL2Q9NZ53 605 aa14.97□□□□□ -0.01
VTI1A-208ENST00000494728 UFL1O94874 794 aa14.96□□□□□ -0.01
VTI1A-208ENST00000494728 EXOSC9Q06265 439 aaKnown RBP14.96□□□□□ -0.01
VTI1A-208ENST00000494728 FLIIQ13045 1269 aa14.96□□□□□ -0.01
VTI1A-208ENST00000494728 DLK2Q6UY11 383 aa14.96□□□□□ -0.01
VTI1A-208ENST00000494728 MICALL2Q8IY33 904 aa14.96□□□□□ -0.01
VTI1A-208ENST00000494728 BCL2L13Q9BXK5 485 aa14.96□□□□□ -0.01
VTI1A-208ENST00000494728 GREM2Q9H772 168 aa14.96□□□□□ -0.01
VTI1A-208ENST00000494728 FOXN1O15353 648 aa14.95□□□□□ -0.02
VTI1A-208ENST00000494728 VAMP4O75379 141 aa14.95□□□□□ -0.02
VTI1A-208ENST00000494728 TNIP1Q15025 636 aa14.95□□□□□ -0.02
VTI1A-208ENST00000494728 UBE3BQ7Z3V4 1068 aa14.95□□□□□ -0.02
VTI1A-208ENST00000494728 TTLL11Q8NHH1 800 aa14.95□□□□□ -0.02
VTI1A-208ENST00000494728 CNOT7Q9UIV1 285 aaKnown RBP14.95□□□□□ -0.02
VTI1A-208ENST00000494728 CASP7P55210 303 aa14.94□□□□□ -0.02
VTI1A-208ENST00000494728 SAMD7Q7Z3H4 446 aa14.94□□□□□ -0.02
VTI1A-208ENST00000494728 FAM9BQ8IZU0 186 aa14.94□□□□□ -0.02
VTI1A-208ENST00000494728 PGAP2Q9UHJ9 254 aa14.94□□□□□ -0.02
VTI1A-208ENST00000494728 ABT1Q9ULW3 272 aaKnown RBP14.94□□□□□ -0.02
VTI1A-208ENST00000494728 ZNF609O15014 1411 aa14.93□□□□□ -0.02
VTI1A-208ENST00000494728 H7C1W4 665 aa14.93□□□□□ -0.02
VTI1A-208ENST00000494728 FKBP5Q13451 457 aaPredicted RBP14.93□□□□□ -0.02
VTI1A-208ENST00000494728 GCKRQ14397 625 aa14.93□□□□□ -0.02
VTI1A-208ENST00000494728 TBC1D10BQ4KMP7 808 aaPredicted RBP14.93□□□□□ -0.02
VTI1A-208ENST00000494728 WDR63Q8IWG1 891 aa14.93□□□□□ -0.02
VTI1A-208ENST00000494728 ANKIB1Q9P2G1 1089 aa14.93□□□□□ -0.02
VTI1A-208ENST00000494728 GGA1Q9UJY5 639 aa14.93□□□□□ -0.02
VTI1A-208ENST00000494728 XDHP47989 1333 aa14.92□□□□□ -0.02
VTI1A-208ENST00000494728 WDR33Q9C0J8 1336 aaKnown RBP14.92□□□□□ -0.02
VTI1A-208ENST00000494728 F6X3S4 739 aa14.92□□□□□ -0.02
VTI1A-208ENST00000494728 NEXNQ0ZGT2 675 aa14.92□□□□□ -0.02
VTI1A-208ENST00000494728 DEFB115Q30KQ5 88 aa14.92□□□□□ -0.02
VTI1A-208ENST00000494728 FAM161AQ3B820 660 aa14.92□□□□□ -0.02
VTI1A-208ENST00000494728 ANKRD18AQ8IVF6 992 aa14.92□□□□□ -0.02
VTI1A-208ENST00000494728 DNAAF4Q8WXU2 420 aa14.92□□□□□ -0.02
VTI1A-208ENST00000494728 DPF2Q92785 391 aa14.92□□□□□ -0.02
VTI1A-208ENST00000494728 EYA3Q99504 573 aa14.92□□□□□ -0.02
VTI1A-208ENST00000494728 CHMP4AQ9BY43 222 aa14.92□□□□□ -0.02
VTI1A-208ENST00000494728 ASTN2O75129 1339 aaPredicted RBP14.92□□□□□ -0.02
VTI1A-208ENST00000494728 ZNF521Q96K83 1311 aa14.92□□□□□ -0.02
VTI1A-208ENST00000494728 HSP90B1P14625 803 aaKnown RBP14.91□□□□□ -0.02
VTI1A-208ENST00000494728 CYP4F22Q6NT55 531 aa14.91□□□□□ -0.02
VTI1A-208ENST00000494728 TLL2Q9Y6L7 1015 aa14.91□□□□□ -0.02
VTI1A-208ENST00000494728 MED23Q9ULK4 1368 aa14.9□□□□□ -0.02
VTI1A-208ENST00000494728 CELF2O95319 508 aaKnown RBP14.9□□□□□ -0.02
VTI1A-208ENST00000494728 KLRK1P26718 216 aa14.9□□□□□ -0.02
VTI1A-208ENST00000494728 TNS4Q8IZW8 715 aa14.9□□□□□ -0.02
VTI1A-208ENST00000494728 CAPNS2Q96L46 248 aa14.9□□□□□ -0.02
VTI1A-208ENST00000494728 CDC5LQ99459 802 aaKnown RBP14.9□□□□□ -0.02
VTI1A-208ENST00000494728 PLA2G12BQ9BX93 195 aa14.9□□□□□ -0.02
VTI1A-208ENST00000494728 ZC3H12CQ9C0D7 883 aaKnown RBP14.9□□□□□ -0.02
VTI1A-208ENST00000494728 WBP1LQ9NX94 342 aa14.9□□□□□ -0.02
VTI1A-208ENST00000494728 MINPP1Q9UNW1 487 aa14.9□□□□□ -0.02
VTI1A-208ENST00000494728 ADM5C9JUS6 153 aa14.89□□□□□ -0.03
VTI1A-208ENST00000494728 H7C1D1 291 aa14.89□□□□□ -0.03
VTI1A-208ENST00000494728 VIL1P09327 827 aaKnown RBP14.89□□□□□ -0.03
VTI1A-208ENST00000494728 GRM1Q13255 1194 aa14.89□□□□□ -0.03
VTI1A-208ENST00000494728 SAPCD2Q86UD0 394 aa14.89□□□□□ -0.03
VTI1A-208ENST00000494728 TXNRD3Q86VQ6 643 aa14.89□□□□□ -0.03
VTI1A-208ENST00000494728 LINS1Q8NG48 757 aa14.89□□□□□ -0.03
VTI1A-208ENST00000494728 ZC3H15Q8WU90 426 aaKnown RBP14.89□□□□□ -0.03
VTI1A-208ENST00000494728 ZNF408Q9H9D4 720 aa14.89□□□□□ -0.03
VTI1A-208ENST00000494728 BSDC1Q9NW68 430 aaPredicted RBP14.89□□□□□ -0.03
VTI1A-208ENST00000494728 ECM29Q5VYK3 1845 aa14.88□□□□□ -0.03
VTI1A-208ENST00000494728 AOC2O75106 756 aa14.88□□□□□ -0.03
VTI1A-208ENST00000494728 RPS12P25398 132 aaKnown RBP14.88□□□□□ -0.03
VTI1A-208ENST00000494728 KIF4BQ2VIQ3 1234 aa14.88□□□□□ -0.03
VTI1A-208ENST00000494728 RBM26Q5T8P6 1007 aaKnown RBP14.88□□□□□ -0.03
VTI1A-208ENST00000494728 PAXIP1Q6ZW49 1069 aaPredicted RBP14.88□□□□□ -0.03
VTI1A-208ENST00000494728 USP48Q86UV5 1035 aa14.88□□□□□ -0.03
VTI1A-208ENST00000494728 MXD3Q9BW11 206 aa14.88□□□□□ -0.03
VTI1A-208ENST00000494728 ARAP2Q8WZ64 1704 aa14.87□□□□□ -0.03
VTI1A-208ENST00000494728 CAPN15O75808 1086 aa14.87□□□□□ -0.03
VTI1A-208ENST00000494728 CSF1RP07333 972 aa14.87□□□□□ -0.03
VTI1A-208ENST00000494728 ITGA6P23229 1130 aa14.87□□□□□ -0.03
VTI1A-208ENST00000494728 ATP2B4P23634 1241 aa14.87□□□□□ -0.03
VTI1A-208ENST00000494728 CCT4P50991 539 aaKnown RBP14.87□□□□□ -0.03
VTI1A-208ENST00000494728 EPHA10Q5JZY3 1008 aa14.87□□□□□ -0.03
VTI1A-208ENST00000494728 BEND3Q5T5X7 828 aa14.87□□□□□ -0.03
VTI1A-208ENST00000494728 RSBN1LQ6PCB5 846 aaPredicted RBP14.87□□□□□ -0.03
VTI1A-208ENST00000494728 GMLQ99445 158 aa14.87□□□□□ -0.03
VTI1A-208ENST00000494728 CASP8AP2Q9UKL3 1982 aa14.86□□□□□ -0.03
VTI1A-208ENST00000494728 SNAP23O00161 211 aa14.86□□□□□ -0.03
VTI1A-208ENST00000494728 HSPA8P11142 646 aaKnown RBP14.86□□□□□ -0.03
VTI1A-208ENST00000494728 ZNF280AP59817 542 aaPredicted RBP14.86□□□□□ -0.03
VTI1A-208ENST00000494728 FOXO4P98177 505 aa14.86□□□□□ -0.03
VTI1A-208ENST00000494728 CDC37L1Q7L3B6 337 aa14.86□□□□□ -0.03
VTI1A-208ENST00000494728 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
VTI1A-208ENST00000494728 GGA3Q9NZ52 723 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms