RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 NAGPAQ9UK23 515 aa9.77□□□□□ -0.85
NCL-210ENST00000494618 PATL2C9JE40 543 aaKnown RBP9.76□□□□□ -0.85
NCL-210ENST00000494618 KCNA1Q09470 495 aa9.76□□□□□ -0.85
NCL-210ENST00000494618 PERM1Q5SV97 790 aa9.76□□□□□ -0.85
NCL-210ENST00000494618 PMEPA1Q969W9 287 aa9.76□□□□□ -0.85
NCL-210ENST00000494618 PLVAPQ9BX97 442 aa9.76□□□□□ -0.85
NCL-210ENST00000494618 CCDC87Q9NVE4 849 aa9.76□□□□□ -0.85
NCL-210ENST00000494618 TMEM63CQ9P1W3 806 aa9.76□□□□□ -0.85
NCL-210ENST00000494618 J3QW42 95 aa9.75□□□□□ -0.85
NCL-210ENST00000494618 NDUFB5O43674 189 aa9.75□□□□□ -0.85
NCL-210ENST00000494618 PDIA4P13667 645 aaKnown RBP9.75□□□□□ -0.85
NCL-210ENST00000494618 GSK3AP49840 483 aa9.75□□□□□ -0.85
NCL-210ENST00000494618 TTC9Q92623 222 aa9.75□□□□□ -0.85
NCL-210ENST00000494618 TRIM11Q96F44 468 aa9.75□□□□□ -0.85
NCL-210ENST00000494618 LPIN3Q9BQK8 851 aa9.75□□□□□ -0.85
NCL-210ENST00000494618 SUV39H2Q9H5I1 410 aa9.75□□□□□ -0.85
NCL-210ENST00000494618 AFF1P51825 1210 aaKnown RBP9.74□□□□□ -0.85
NCL-210ENST00000494618 SMG9Q9H0W8 520 aaKnown RBP9.74□□□□□ -0.85
NCL-210ENST00000494618 A6NHS1 94 aa9.73□□□□□ -0.85
NCL-210ENST00000494618 SOWAHDA6NJG2 315 aa9.73□□□□□ -0.85
NCL-210ENST00000494618 NID1P14543 1247 aa9.73□□□□□ -0.85
NCL-210ENST00000494618 CES1P23141 567 aa9.73□□□□□ -0.85
NCL-210ENST00000494618 ARHGAP4P98171 946 aa9.73□□□□□ -0.85
NCL-210ENST00000494618 ECM1Q16610 540 aa9.73□□□□□ -0.85
NCL-210ENST00000494618 PRRT3Q5FWE3 981 aa9.73□□□□□ -0.85
NCL-210ENST00000494618 TRAPPC3LQ5T215 181 aa9.73□□□□□ -0.85
NCL-210ENST00000494618 NCAPG2Q86XI2 1143 aa9.73□□□□□ -0.85
NCL-210ENST00000494618 PLD4Q96BZ4 506 aa9.73□□□□□ -0.85
NCL-210ENST00000494618 DCAF5Q96JK2 942 aa9.73□□□□□ -0.85
NCL-210ENST00000494618 TRIM28Q13263 835 aaKnown RBP9.72□□□□□ -0.85
NCL-210ENST00000494618 PDE3BQ13370 1112 aa9.72□□□□□ -0.85
NCL-210ENST00000494618 GJD3Q8N144 294 aa9.72□□□□□ -0.85
NCL-210ENST00000494618 CITED4Q96RK1 184 aa9.72□□□□□ -0.85
NCL-210ENST00000494618 BIN2Q9UBW5 565 aaPredicted RBP9.72□□□□□ -0.85
NCL-210ENST00000494618 KIF4AO95239 1232 aa9.71□□□□□ -0.86
NCL-210ENST00000494618 COL8A1P27658 744 aa9.71□□□□□ -0.86
NCL-210ENST00000494618 COL9A3Q14050 684 aaPredicted RBP9.71□□□□□ -0.86
NCL-210ENST00000494618 C1orf127Q8N9H9 656 aa9.71□□□□□ -0.86
NCL-210ENST00000494618 SNX29Q8TEQ0 813 aa9.71□□□□□ -0.86
NCL-210ENST00000494618 CNTN3Q9P232 1028 aa9.71□□□□□ -0.86
NCL-210ENST00000494618 PHACTR2O75167 634 aa9.7□□□□□ -0.86
NCL-210ENST00000494618 CYP2E1P05181 493 aaPredicted RBP9.7□□□□□ -0.86
NCL-210ENST00000494618 NEFLP07196 543 aa9.7□□□□□ -0.86
NCL-210ENST00000494618 IVNS1ABPQ9Y6Y0 642 aa9.7□□□□□ -0.86
NCL-210ENST00000494618 TNFRSF21O75509 655 aa9.69□□□□□ -0.86
NCL-210ENST00000494618 SMNDC1O75940 238 aaKnown RBP eCLIP9.69□□□□□ -0.866e-22■■■□□ 16.9
NCL-210ENST00000494618 SPATA31C1P0DKV0 1188 aa9.69□□□□□ -0.86
NCL-210ENST00000494618 COL13A1Q5TAT6 717 aaPredicted RBP9.69□□□□□ -0.86
NCL-210ENST00000494618 MSL1Q68DK7 614 aa9.69□□□□□ -0.86
NCL-210ENST00000494618 CACTIN-AS1Q8N1I8 211 aa9.69□□□□□ -0.86
NCL-210ENST00000494618 TMC1Q8TDI8 760 aa9.69□□□□□ -0.86
NCL-210ENST00000494618 KANSL3Q9P2N6 904 aa9.69□□□□□ -0.86
NCL-210ENST00000494618 RAC1P63000 192 aa9.68□□□□□ -0.86
NCL-210ENST00000494618 WFDC8Q8IUA0 241 aa9.68□□□□□ -0.86
NCL-210ENST00000494618 DMRTC2Q8IXT2 367 aaPredicted RBP9.68□□□□□ -0.86
NCL-210ENST00000494618 GRIK5Q16478 980 aa9.67□□□□□ -0.86
NCL-210ENST00000494618 GDF6Q6KF10 455 aaPredicted RBP9.67□□□□□ -0.86
NCL-210ENST00000494618 CEP120Q8N960 986 aa9.67□□□□□ -0.86
NCL-210ENST00000494618 SALL4Q9UJQ4 1053 aa9.67□□□□□ -0.86
NCL-210ENST00000494618 CEP135Q66GS9 1140 aa9.66□□□□□ -0.86
NCL-210ENST00000494618 CHRDQ9H2X0 955 aa9.66□□□□□ -0.86
NCL-210ENST00000494618 FOXD3Q9UJU5 478 aaPredicted RBP9.66□□□□□ -0.86
NCL-210ENST00000494618 A0A0A0MRY4 1105 aa9.65□□□□□ -0.86
NCL-210ENST00000494618 FAM177BA6PVY3 158 aa9.65□□□□□ -0.86
NCL-210ENST00000494618 APBA3O96018 575 aa9.65□□□□□ -0.86
NCL-210ENST00000494618 EDN3P14138 238 aa9.65□□□□□ -0.86
NCL-210ENST00000494618 AEBP1Q8IUX7 1158 aa9.65□□□□□ -0.86
NCL-210ENST00000494618 DTWD1Q8N5C7 304 aa9.65□□□□□ -0.86
NCL-210ENST00000494618 KCTD17Q8N5Z5 321 aa9.65□□□□□ -0.86
NCL-210ENST00000494618 IL22RA1Q8N6P7 574 aa9.65□□□□□ -0.86
NCL-210ENST00000494618 PBX4Q9BYU1 374 aa9.65□□□□□ -0.86
NCL-210ENST00000494618 RASSF4Q9H2L5 321 aa9.65□□□□□ -0.86
NCL-210ENST00000494618 AMOTL2Q9Y2J4 779 aa9.65□□□□□ -0.86
NCL-210ENST00000494618 KRBA1A5PL33 1030 aa9.64□□□□□ -0.87
NCL-210ENST00000494618 EREGO14944 169 aa9.64□□□□□ -0.87
NCL-210ENST00000494618 ATP11AP98196 1134 aa9.64□□□□□ -0.87
NCL-210ENST00000494618 DMRTB1Q96MA1 342 aa9.64□□□□□ -0.87
NCL-210ENST00000494618 NACC1Q96RE7 527 aa9.64□□□□□ -0.87
NCL-210ENST00000494618 FAM129BQ96TA1 746 aa9.64□□□□□ -0.87
NCL-210ENST00000494618 RBCK1Q9BYM8 510 aa9.64□□□□□ -0.87
NCL-210ENST00000494618 MUC3BQ9H195 1237 aa9.64□□□□□ -0.87
NCL-210ENST00000494618 ZFYVE28Q9HCC9 887 aa9.64□□□□□ -0.87
NCL-210ENST00000494618 DCTN4Q9UJW0 460 aa9.64□□□□□ -0.87
NCL-210ENST00000494618 FAM229AH3BQW9 127 aa9.63□□□□□ -0.87
NCL-210ENST00000494618 PLA2G4EQ3MJ16 856 aa9.63□□□□□ -0.87
NCL-210ENST00000494618 TRIM33Q9UPN9 1127 aa9.63□□□□□ -0.87
NCL-210ENST00000494618 IGHA1P01876 353 aa9.62□□□□□ -0.87
NCL-210ENST00000494618 ELNP15502 786 aa9.61□□□□□ -0.87
NCL-210ENST00000494618 MAPK1P28482 360 aa9.61□□□□□ -0.87
NCL-210ENST00000494618 ILDR2Q71H61 639 aa9.61□□□□□ -0.87
NCL-210ENST00000494618 FMR1NBQ8N0W7 255 aaPredicted RBP9.61□□□□□ -0.87
NCL-210ENST00000494618 DCAF11Q8TEB1 546 aa9.61□□□□□ -0.87
NCL-210ENST00000494618 LACRTQ9GZZ8 138 aa9.61□□□□□ -0.87
NCL-210ENST00000494618 PPME1Q9Y570 386 aa9.61□□□□□ -0.87
NCL-210ENST00000494618 PTPRAP18433 802 aa9.6□□□□□ -0.87
NCL-210ENST00000494618 CDC27P30260 824 aa9.6□□□□□ -0.87
NCL-210ENST00000494618 GPAT2Q6NUI2 795 aa9.6□□□□□ -0.87
NCL-210ENST00000494618 OSMRQ99650 979 aa9.6□□□□□ -0.87
NCL-210ENST00000494618 NIF3L1Q9GZT8 377 aa9.6□□□□□ -0.87
NCL-210ENST00000494618 SRA1Q9HD15 236 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms