RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 PIP4P2Q8N4L2 257 aa9.14□□□□□ -0.95
FN1-225ENST00000494446 SCAF8Q9UPN6 1271 aaKnown RBP9.14□□□□□ -0.95
FN1-225ENST00000494446 PTPN22Q9Y2R2 807 aa9.14□□□□□ -0.95
FN1-225ENST00000494446 RRP7AQ9Y3A4 280 aaKnown RBP9.14□□□□□ -0.95
FN1-225ENST00000494446 KNSTRNQ9Y448 316 aa9.14□□□□□ -0.95
FN1-225ENST00000494446 KDM3BQ7LBC6 1761 aa9.14□□□□□ -0.95
FN1-225ENST00000494446 MNX1P50219 401 aaPredicted RBP9.13□□□□□ -0.95
FN1-225ENST00000494446 DOK7Q18PE1 504 aa9.13□□□□□ -0.95
FN1-225ENST00000494446 PRAMEF18Q5VWM3 479 aa9.13□□□□□ -0.95
FN1-225ENST00000494446 DDX46Q7L014 1031 aaKnown RBP9.13□□□□□ -0.95
FN1-225ENST00000494446 ZNF34Q8IZ26 560 aa9.13□□□□□ -0.95
FN1-225ENST00000494446 CFHR5Q9BXR6 569 aa9.13□□□□□ -0.95
FN1-225ENST00000494446 RBM27Q9P2N5 1060 aaKnown RBP9.13□□□□□ -0.95
FN1-225ENST00000494446 C6orf229H3BNL8 230 aa9.12□□□□□ -0.95
FN1-225ENST00000494446 ECE2O60344 883 aa9.12□□□□□ -0.95
FN1-225ENST00000494446 MYL6BP14649 208 aa9.12□□□□□ -0.95
FN1-225ENST00000494446 CD99L2Q8TCZ2 262 aa9.12□□□□□ -0.95
FN1-225ENST00000494446 ARMC5Q96C12 935 aa9.12□□□□□ -0.95
FN1-225ENST00000494446 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.12□□□□□ -0.95
FN1-225ENST00000494446 RTL9Q8NET4 1388 aa9.12□□□□□ -0.95
FN1-225ENST00000494446 ALDH1A1P00352 501 aa9.11□□□□□ -0.95
FN1-225ENST00000494446 HCLS1P14317 486 aaPredicted RBP9.11□□□□□ -0.95
FN1-225ENST00000494446 TCIRG1Q13488 830 aa9.11□□□□□ -0.95
FN1-225ENST00000494446 GRAPQ13588 217 aa9.11□□□□□ -0.95
FN1-225ENST00000494446 SLC4A8Q2Y0W8 1093 aa9.11□□□□□ -0.95
FN1-225ENST00000494446 PARP10Q53GL7 1025 aa9.11□□□□□ -0.95
FN1-225ENST00000494446 SLC10A5Q5PT55 438 aa9.11□□□□□ -0.95
FN1-225ENST00000494446 MCM10Q7L590 875 aa9.11□□□□□ -0.95
FN1-225ENST00000494446 GRAPLQ8TC17 118 aaPredicted RBP9.11□□□□□ -0.95
FN1-225ENST00000494446 ERO1AQ96HE7 468 aa9.11□□□□□ -0.95
FN1-225ENST00000494446 UTP14AQ9BVJ6 771 aaKnown RBP9.11□□□□□ -0.95
FN1-225ENST00000494446 NSFL1CQ9UNZ2 370 aaKnown RBP9.11□□□□□ -0.95
FN1-225ENST00000494446 LAMB1P07942 1786 aa9.11□□□□□ -0.95
FN1-225ENST00000494446 DLG5Q8TDM6 1919 aa9.1□□□□□ -0.95
FN1-225ENST00000494446 G3V3G9 751 aa9.1□□□□□ -0.95
FN1-225ENST00000494446 MYCP01106 439 aaPredicted RBP9.1□□□□□ -0.95
FN1-225ENST00000494446 NF2P35240 595 aa9.1□□□□□ -0.95
FN1-225ENST00000494446 PTPN12Q05209 780 aaKnown RBP9.1□□□□□ -0.95
FN1-225ENST00000494446 PRKG1Q13976 671 aa9.1□□□□□ -0.95
FN1-225ENST00000494446 DCAF8Q5TAQ9 597 aa9.1□□□□□ -0.95
FN1-225ENST00000494446 GIGYF2Q6Y7W6 1299 aaKnown RBP9.1□□□□□ -0.95
FN1-225ENST00000494446 RTF1Q92541 710 aaKnown RBP9.1□□□□□ -0.95
FN1-225ENST00000494446 DPF3Q92784 378 aa9.1□□□□□ -0.95
FN1-225ENST00000494446 PHACTR3Q96KR7 559 aa9.1□□□□□ -0.95
FN1-225ENST00000494446 EFCC1Q9HA90 598 aa9.1□□□□□ -0.95
FN1-225ENST00000494446 PITPNM2Q9BZ72 1349 aa9.09□□□□□ -0.95
FN1-225ENST00000494446 ZNF609O15014 1411 aa9.09□□□□□ -0.95
FN1-225ENST00000494446 VIL1P09327 827 aaKnown RBP9.09□□□□□ -0.95
FN1-225ENST00000494446 SPRYD7Q5W111 196 aa9.09□□□□□ -0.95
FN1-225ENST00000494446 TMC4Q7Z404 712 aa9.09□□□□□ -0.95
FN1-225ENST00000494446 IFNL1Q8IU54 200 aa9.09□□□□□ -0.95
FN1-225ENST00000494446 MIS18AQ9NYP9 233 aa9.09□□□□□ -0.95
FN1-225ENST00000494446 POLLQ9UGP5 575 aa9.09□□□□□ -0.95
FN1-225ENST00000494446 ZNF280AP59817 542 aaPredicted RBP9.08□□□□□ -0.96
FN1-225ENST00000494446 GPSM2P81274 684 aa9.08□□□□□ -0.96
FN1-225ENST00000494446 DCTN1Q14203 1278 aa9.08□□□□□ -0.96
FN1-225ENST00000494446 SLC9C1Q4G0N8 1177 aa9.08□□□□□ -0.96
FN1-225ENST00000494446 ARMC9Q7Z3E5 817 aa9.08□□□□□ -0.96
FN1-225ENST00000494446 NBPF11Q86T75 865 aa9.08□□□□□ -0.96
FN1-225ENST00000494446 ZNF333Q96JL9 665 aa9.08□□□□□ -0.96
FN1-225ENST00000494446 EYA3Q99504 573 aa9.08□□□□□ -0.96
FN1-225ENST00000494446 MYOZ2Q9NPC6 264 aa9.08□□□□□ -0.96
FN1-225ENST00000494446 UNC80Q8N2C7 3258 aa9.08□□□□□ -0.96
FN1-225ENST00000494446 MANSC4A6NHS7 340 aaPredicted RBP9.07□□□□□ -0.96
FN1-225ENST00000494446 WTIPA6NIX2 430 aaPredicted RBP9.07□□□□□ -0.96
FN1-225ENST00000494446 PRKAR2BP31323 418 aa9.07□□□□□ -0.96
FN1-225ENST00000494446 INHBEP58166 350 aa9.07□□□□□ -0.96
FN1-225ENST00000494446 TAF7Q15545 349 aaPredicted RBP9.07□□□□□ -0.96
FN1-225ENST00000494446 RSBN1LQ6PCB5 846 aaPredicted RBP9.07□□□□□ -0.96
FN1-225ENST00000494446 ZC3H12CQ9C0D7 883 aaKnown RBP9.07□□□□□ -0.96
FN1-225ENST00000494446 ZSWIM8A7E2V4 1837 aa9.07□□□□□ -0.96
FN1-225ENST00000494446 ZNF646O15015 1829 aaPredicted RBP9.06□□□□□ -0.96
FN1-225ENST00000494446 IGF2BP3O00425 579 aaKnown RBP eCLIP9.06□□□□□ -0.962e-24■■■■■ 39.8
FN1-225ENST00000494446 USP17L8P0C7I0 530 aa9.06□□□□□ -0.96
FN1-225ENST00000494446 CAP1Q01518 475 aa9.06□□□□□ -0.96
FN1-225ENST00000494446 SP3Q02447 781 aa9.06□□□□□ -0.96
FN1-225ENST00000494446 CRHR2Q13324 411 aa9.06□□□□□ -0.96
FN1-225ENST00000494446 NBPF9Q3BBW0 867 aa9.06□□□□□ -0.96
FN1-225ENST00000494446 AMER1Q5JTC6 1135 aaPredicted RBP9.06□□□□□ -0.96
FN1-225ENST00000494446 AGBL3Q8NEM8 1001 aa9.06□□□□□ -0.96
FN1-225ENST00000494446 ZNF428Q96B54 188 aa9.06□□□□□ -0.96
FN1-225ENST00000494446 SLC10A4Q96EP9 437 aa9.06□□□□□ -0.96
FN1-225ENST00000494446 LRCH3Q96II8 777 aa9.06□□□□□ -0.96
FN1-225ENST00000494446 COL25A1Q9BXS0 654 aaPredicted RBP9.06□□□□□ -0.96
FN1-225ENST00000494446 TRMT112Q9UI30 125 aaKnown RBP9.06□□□□□ -0.96
FN1-225ENST00000494446 ANGEL1Q9UNK9 670 aaKnown RBP9.06□□□□□ -0.96
FN1-225ENST00000494446 COL3A1P02461 1466 aaPredicted RBP9.06□□□□□ -0.96
FN1-225ENST00000494446 COL4A1P02462 1669 aa9.06□□□□□ -0.96
FN1-225ENST00000494446 SOX1O00570 391 aaPredicted RBP9.05□□□□□ -0.96
FN1-225ENST00000494446 CNGB1Q14028 1251 aaPredicted RBP9.05□□□□□ -0.96
FN1-225ENST00000494446 TBC1D16Q8TBP0 767 aa9.05□□□□□ -0.96
FN1-225ENST00000494446 CELF1Q92879 486 aaKnown RBP9.05□□□□□ -0.96
FN1-225ENST00000494446 THUMPD2Q9BTF0 503 aaKnown RBP9.05□□□□□ -0.96
FN1-225ENST00000494446 FZD1Q9UP38 647 aa9.05□□□□□ -0.96
FN1-225ENST00000494446 PTCH2Q9Y6C5 1203 aa9.05□□□□□ -0.96
FN1-225ENST00000494446 ECM29Q5VYK3 1845 aa9.04□□□□□ -0.96
FN1-225ENST00000494446 CC2D1BQ5T0F9 858 aaKnown RBP9.04□□□□□ -0.96
FN1-225ENST00000494446 LDLRAD1Q5T700 205 aa9.04□□□□□ -0.96
FN1-225ENST00000494446 OTUD7BQ6GQQ9 843 aa9.04□□□□□ -0.96
FN1-225ENST00000494446 NLRP10Q86W26 655 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms