RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 C14orf37Q86TY3 774 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 CLP1Q92989 425 aaKnown RBP4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 ARID3AQ99856 593 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 GPR152Q8TDT2 470 aa4.06□□□□□ -1.76
CDC42EP3-205ENST00000494083 SERPINA10Q9UK55 444 aa4.06□□□□□ -1.76
CDC42EP3-205ENST00000494083 CUX1P39880 1505 aa4.06□□□□□ -1.76
CDC42EP3-205ENST00000494083 HIF1AQ16665 826 aa4.06□□□□□ -1.76
CDC42EP3-205ENST00000494083 NOP53Q9NZM5 478 aaKnown RBP4.06□□□□□ -1.76
CDC42EP3-205ENST00000494083 SPATA31C1P0DKV0 1188 aa4.06□□□□□ -1.76
CDC42EP3-205ENST00000494083 SELPP16109 830 aa4.06□□□□□ -1.76
CDC42EP3-205ENST00000494083 BAG6P46379 1132 aa4.06□□□□□ -1.76
CDC42EP3-205ENST00000494083 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 EPB42P16452 691 aa4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 EIF2AK2P19525 551 aaKnown RBP4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 ZAP70P43403 619 aa4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 DOC2BQ14184 412 aa4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 GRIK5Q16478 980 aa4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 COL13A1Q5TAT6 717 aaPredicted RBP4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 PHLDB3Q6NSJ2 640 aa4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 DMRTC2Q8IXT2 367 aaPredicted RBP4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 SUPT5HO00267 1087 aaKnown RBP4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 ADAM23O75077 832 aa4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 TRAPPC3LQ5T215 181 aa4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 PBRM1Q86U86 1689 aa4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 CYP2E1P05181 493 aaPredicted RBP4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 TRPM4Q8TD43 1214 aa4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 SMG9Q9H0W8 520 aaKnown RBP4.05□□□□□ -1.76
CDC42EP3-205ENST00000494083 NCOA2Q15596 1464 aa4.04□□□□□ -1.76
CDC42EP3-205ENST00000494083 CEP162Q5TB80 1403 aa4.04□□□□□ -1.76
CDC42EP3-205ENST00000494083 A0A0A0MRY4 1105 aa4.04□□□□□ -1.76
CDC42EP3-205ENST00000494083 GPLD1P80108 840 aa4.04□□□□□ -1.76
CDC42EP3-205ENST00000494083 RNF17Q9BXT8 1623 aaKnown RBP4.04□□□□□ -1.76
CDC42EP3-205ENST00000494083 RGS9O75916 674 aaPredicted RBP4.04□□□□□ -1.76
CDC42EP3-205ENST00000494083 ANO2Q9NQ90 1003 aa4.04□□□□□ -1.76
CDC42EP3-205ENST00000494083 PRDM6Q9NQX0 595 aa4.04□□□□□ -1.76
CDC42EP3-205ENST00000494083 CEP164Q9UPV0 1460 aa4.04□□□□□ -1.76
CDC42EP3-205ENST00000494083 ACPPP15309 386 aa4.04□□□□□ -1.76
CDC42EP3-205ENST00000494083 GDF6Q6KF10 455 aaPredicted RBP4.04□□□□□ -1.76
CDC42EP3-205ENST00000494083 TXNDC11Q6PKC3 985 aa4.04□□□□□ -1.76
CDC42EP3-205ENST00000494083 KANSL3Q9P2N6 904 aa4.04□□□□□ -1.76
CDC42EP3-205ENST00000494083 PPRC1Q5VV67 1664 aaKnown RBP4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 SNAPC4Q5SXM2 1469 aa4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 EFCAB5A4FU69 1503 aa4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 DEAF1O75398 565 aaPredicted RBP4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 IGHA1P01876 353 aa4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 MPSTP25325 297 aa4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 BRD2P25440 801 aaKnown RBP4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 ATP11AP98196 1134 aa4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 STIM2Q9P246 746 aa4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 TRIM33Q9UPN9 1127 aa4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 ZEB1P37275 1124 aaPredicted RBP4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 NUDT16Q96DE0 195 aaKnown RBP4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 TPSG1Q9NRR2 321 aa4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 TMEM63CQ9P1W3 806 aa4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 VPS8Q8N3P4 1428 aa4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 RUSC2Q8N2Y8 1516 aa4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 CEP170Q5SW79 1584 aa4.03□□□□□ -1.76
CDC42EP3-205ENST00000494083 UBAP1LF5GYI3 381 aa4.03□□□□□ -1.77
CDC42EP3-205ENST00000494083 TRPA1O75762 1119 aa4.03□□□□□ -1.77
CDC42EP3-205ENST00000494083 MAP3K6O95382 1288 aa4.03□□□□□ -1.77
CDC42EP3-205ENST00000494083 CDC25BP30305 580 aa4.03□□□□□ -1.77
CDC42EP3-205ENST00000494083 ZNF211Q13398 564 aaPredicted RBP4.03□□□□□ -1.77
CDC42EP3-205ENST00000494083 ELMSAN1Q6PJG2 1045 aa4.03□□□□□ -1.77
CDC42EP3-205ENST00000494083 MBD5Q9P267 1494 aa4.02□□□□□ -1.77
CDC42EP3-205ENST00000494083 PCF11O94913 1555 aaKnown RBP4.02□□□□□ -1.77
CDC42EP3-205ENST00000494083 EGFRP00533 1210 aa4.02□□□□□ -1.77
CDC42EP3-205ENST00000494083 GTF3C2Q8WUA4 911 aaPredicted RBP4.02□□□□□ -1.77
CDC42EP3-205ENST00000494083 PLD4Q96BZ4 506 aa4.02□□□□□ -1.77
CDC42EP3-205ENST00000494083 TLR7Q9NYK1 1049 aaKnown RBP4.02□□□□□ -1.77
CDC42EP3-205ENST00000494083 TCOF1Q13428 1488 aaKnown RBP4.02□□□□□ -1.77
CDC42EP3-205ENST00000494083 SSFA2P28290 1259 aa4.02□□□□□ -1.77
CDC42EP3-205ENST00000494083 FMR1NBQ8N0W7 255 aaPredicted RBP4.02□□□□□ -1.77
CDC42EP3-205ENST00000494083 IFT172Q9UG01 1749 aa4.02□□□□□ -1.77
CDC42EP3-205ENST00000494083 NRG1Q02297 640 aaPredicted RBP4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 DNM1Q05193 864 aaKnown RBP4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 TARBP1Q13395 1621 aaKnown RBP4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 MBTPS1Q14703 1052 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 ZMYM4Q5VZL5 1548 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 HHIPQ96QV1 700 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 CLSPNQ9HAW4 1339 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 NRLP54845 237 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 TRIM28Q13263 835 aaKnown RBP4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 PRRT3Q5FWE3 981 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 MSL1Q68DK7 614 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 ILDR2Q71H61 639 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 COL26A1Q96A83 441 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 ZC3H13Q5T200 1668 aaKnown RBP4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 K7ELQ4 463 aaPredicted RBP4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 PIK3R2O00459 728 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 PTCD1O75127 700 aaKnown RBP4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 EIF1AXP47813 144 aaKnown RBP4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 HELQQ8TDG4 1101 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 LACRTQ9GZZ8 138 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 NEURL4Q96JN8 1562 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 KDM5DQ9BY66 1539 aa4.01□□□□□ -1.77
CDC42EP3-205ENST00000494083 GATA4P43694 442 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 SERPINB4P48594 390 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 GGNBP2Q9H3C7 697 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 CNTN3Q9P232 1028 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms