RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 CASP7P55210 303 aa12.48□□□□□ -0.41
UFD1-210ENST00000494054 GCKRQ14397 625 aa12.48□□□□□ -0.41
UFD1-210ENST00000494054 UBE3BQ7Z3V4 1068 aa12.48□□□□□ -0.41
UFD1-210ENST00000494054 EYA3Q99504 573 aa12.48□□□□□ -0.41
UFD1-210ENST00000494054 GREM2Q9H772 168 aa12.48□□□□□ -0.41
UFD1-210ENST00000494054 ANKIB1Q9P2G1 1089 aa12.48□□□□□ -0.41
UFD1-210ENST00000494054 RTL9Q8NET4 1388 aa12.47□□□□□ -0.41
UFD1-210ENST00000494054 ZNF521Q96K83 1311 aa12.47□□□□□ -0.41
UFD1-210ENST00000494054 F6X3S4 739 aa12.47□□□□□ -0.41
UFD1-210ENST00000494054 TRAF5O00463 557 aa12.47□□□□□ -0.41
UFD1-210ENST00000494054 ECE2O60344 883 aa12.47□□□□□ -0.41
UFD1-210ENST00000494054 UFL1O94874 794 aa12.47□□□□□ -0.41
UFD1-210ENST00000494054 ANKRD18AQ8IVF6 992 aa12.47□□□□□ -0.41
UFD1-210ENST00000494054 LINS1Q8NG48 757 aa12.47□□□□□ -0.41
UFD1-210ENST00000494054 TRPM4Q8TD43 1214 aa12.47□□□□□ -0.41
UFD1-210ENST00000494054 MYH16Q9H6N6 1097 aa12.47□□□□□ -0.41
UFD1-210ENST00000494054 CNOT7Q9UIV1 285 aaKnown RBP12.47□□□□□ -0.41
UFD1-210ENST00000494054 GGA1Q9UJY5 639 aa12.47□□□□□ -0.41
UFD1-210ENST00000494054 CNTNAP1P78357 1384 aa12.46□□□□□ -0.41
UFD1-210ENST00000494054 MICALL2Q8IY33 904 aa12.46□□□□□ -0.41
UFD1-210ENST00000494054 PLA2G12BQ9BX93 195 aa12.46□□□□□ -0.41
UFD1-210ENST00000494054 ZC3H12CQ9C0D7 883 aaKnown RBP12.46□□□□□ -0.41
UFD1-210ENST00000494054 PGAP2Q9UHJ9 254 aa12.46□□□□□ -0.41
UFD1-210ENST00000494054 XDHP47989 1333 aa12.45□□□□□ -0.42
UFD1-210ENST00000494054 HSPA1AP0DMV8 641 aaKnown RBP12.45□□□□□ -0.42
UFD1-210ENST00000494054 HSPA1BP0DMV9 641 aaKnown RBP12.45□□□□□ -0.42
UFD1-210ENST00000494054 VEGFBP49765 207 aa12.45□□□□□ -0.42
UFD1-210ENST00000494054 BEND3Q5T5X7 828 aa12.45□□□□□ -0.42
UFD1-210ENST00000494054 CST9Q5W186 159 aa12.45□□□□□ -0.42
UFD1-210ENST00000494054 DPF2Q92785 391 aa12.45□□□□□ -0.42
UFD1-210ENST00000494054 CDC5LQ99459 802 aaKnown RBP12.45□□□□□ -0.42
UFD1-210ENST00000494054 BSDC1Q9NW68 430 aaPredicted RBP12.45□□□□□ -0.42
UFD1-210ENST00000494054 MINPP1Q9UNW1 487 aa12.45□□□□□ -0.42
UFD1-210ENST00000494054 H7C1D1 291 aa12.44□□□□□ -0.42
UFD1-210ENST00000494054 EGFRP00533 1210 aa12.44□□□□□ -0.42
UFD1-210ENST00000494054 CSF1RP07333 972 aa12.44□□□□□ -0.42
UFD1-210ENST00000494054 COL13A1Q5TAT6 717 aaPredicted RBP12.44□□□□□ -0.42
UFD1-210ENST00000494054 SAMD7Q7Z3H4 446 aa12.44□□□□□ -0.42
UFD1-210ENST00000494054 GLIS2Q9BZE0 524 aaPredicted RBP12.44□□□□□ -0.42
UFD1-210ENST00000494054 CACNA1FO60840 1977 aa12.43□□□□□ -0.42
UFD1-210ENST00000494054 SCN9AQ15858 1988 aa12.43□□□□□ -0.42
UFD1-210ENST00000494054 RASSF10A6NK89 507 aa12.43□□□□□ -0.42
UFD1-210ENST00000494054 VIL1P09327 827 aaKnown RBP12.43□□□□□ -0.42
UFD1-210ENST00000494054 ITGA6P23229 1130 aa12.43□□□□□ -0.42
UFD1-210ENST00000494054 ATP2B4P23634 1241 aa12.43□□□□□ -0.42
UFD1-210ENST00000494054 DEFB115Q30KQ5 88 aa12.43□□□□□ -0.42
UFD1-210ENST00000494054 FAM161AQ3B820 660 aa12.43□□□□□ -0.42
UFD1-210ENST00000494054 TBC1D10BQ4KMP7 808 aaPredicted RBP12.43□□□□□ -0.42
UFD1-210ENST00000494054 ZC3H15Q8WU90 426 aaKnown RBP12.43□□□□□ -0.42
UFD1-210ENST00000494054 ABT1Q9ULW3 272 aaKnown RBP12.43□□□□□ -0.42
UFD1-210ENST00000494054 MYH3P11055 1940 aa12.43□□□□□ -0.42
UFD1-210ENST00000494054 G3V3G9 751 aa12.42□□□□□ -0.42
UFD1-210ENST00000494054 RPS12P25398 132 aaKnown RBP12.42□□□□□ -0.42
UFD1-210ENST00000494054 CCT4P50991 539 aaKnown RBP12.42□□□□□ -0.42
UFD1-210ENST00000494054 FOXO4P98177 505 aa12.42□□□□□ -0.42
UFD1-210ENST00000494054 RBM26Q5T8P6 1007 aaKnown RBP12.42□□□□□ -0.42
UFD1-210ENST00000494054 DCAF8Q5TAQ9 597 aa12.42□□□□□ -0.42
UFD1-210ENST00000494054 DLK2Q6UY11 383 aa12.42□□□□□ -0.42
UFD1-210ENST00000494054 SPEF2Q9C093 1822 aa12.41□□□□□ -0.42
UFD1-210ENST00000494054 IGHMBP2P38935 993 aaKnown RBP12.41□□□□□ -0.42
UFD1-210ENST00000494054 EPHA10Q5JZY3 1008 aa12.41□□□□□ -0.42
UFD1-210ENST00000494054 USP48Q86UV5 1035 aa12.41□□□□□ -0.42
UFD1-210ENST00000494054 TXNRD3Q86VQ6 643 aa12.41□□□□□ -0.42
UFD1-210ENST00000494054 CELF2O95319 508 aaKnown RBP12.4□□□□□ -0.42
UFD1-210ENST00000494054 KLRK1P26718 216 aa12.4□□□□□ -0.42
UFD1-210ENST00000494054 SLFN5Q08AF3 891 aa12.4□□□□□ -0.42
UFD1-210ENST00000494054 RSBN1LQ6PCB5 846 aaPredicted RBP12.4□□□□□ -0.42
UFD1-210ENST00000494054 SLC4A10Q6U841 1118 aa12.4□□□□□ -0.42
UFD1-210ENST00000494054 CDC37L1Q7L3B6 337 aa12.4□□□□□ -0.42
UFD1-210ENST00000494054 PODNQ7Z5L7 613 aa12.4□□□□□ -0.42
UFD1-210ENST00000494054 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
UFD1-210ENST00000494054 CDCA7LQ96GN5 454 aa12.4□□□□□ -0.42
UFD1-210ENST00000494054 GMLQ99445 158 aa12.4□□□□□ -0.42
UFD1-210ENST00000494054 MED23Q9ULK4 1368 aa12.4□□□□□ -0.42
UFD1-210ENST00000494054 ASTN2O75129 1339 aaPredicted RBP12.39□□□□□ -0.43
UFD1-210ENST00000494054 WDR33Q9C0J8 1336 aaKnown RBP12.39□□□□□ -0.43
UFD1-210ENST00000494054 ANKRD18BA2A2Z9 1011 aa12.39□□□□□ -0.43
UFD1-210ENST00000494054 E9PSI1 815 aa12.39□□□□□ -0.43
UFD1-210ENST00000494054 GRM8O00222 908 aa12.39□□□□□ -0.43
UFD1-210ENST00000494054 LMBR1LQ6UX01 489 aa12.39□□□□□ -0.43
UFD1-210ENST00000494054 AGBL3Q8NEM8 1001 aa12.39□□□□□ -0.43
UFD1-210ENST00000494054 MPHOSPH8Q99549 860 aa12.39□□□□□ -0.43
UFD1-210ENST00000494054 MXD3Q9BW11 206 aa12.39□□□□□ -0.43
UFD1-210ENST00000494054 SRCIN1Q9C0H9 1055 aa12.39□□□□□ -0.43
UFD1-210ENST00000494054 ANKRD2Q9GZV1 360 aa12.39□□□□□ -0.43
UFD1-210ENST00000494054 LEMD3Q9Y2U8 911 aa12.39□□□□□ -0.43
UFD1-210ENST00000494054 TLL2Q9Y6L7 1015 aa12.39□□□□□ -0.43
UFD1-210ENST00000494054 PCNTO95613 3336 aa12.39□□□□□ -0.43
UFD1-210ENST00000494054 ZNF804BA4D1E1 1349 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 TRPM7Q96QT4 1865 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 USP17L3A6NCW0 530 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 USP17L4A6NCW7 530 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 SNAP23O00161 211 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 FOXN1O15353 648 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 ALDH1L1O75891 902 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 ZNF280AP59817 542 aaPredicted RBP12.38□□□□□ -0.43
UFD1-210ENST00000494054 CHRNDQ07001 517 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 KIF4BQ2VIQ3 1234 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 CYP4F22Q6NT55 531 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 USP17L1Q7RTZ2 530 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms