RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 NSFL1CQ9UNZ2 370 aaKnown RBP12.97□□□□□ -0.33
NR1H3-225ENST00000494018 CEMIPQ8WUJ3 1361 aa12.96□□□□□ -0.33
NR1H3-225ENST00000494018 ERVV-1B6SEH8 477 aa12.96□□□□□ -0.33
NR1H3-225ENST00000494018 RGL2O15211 777 aa12.96□□□□□ -0.33
NR1H3-225ENST00000494018 RPS12P25398 132 aaKnown RBP12.96□□□□□ -0.33
NR1H3-225ENST00000494018 CNGB1Q14028 1251 aaPredicted RBP12.96□□□□□ -0.33
NR1H3-225ENST00000494018 ZNF34Q8IZ26 560 aa12.96□□□□□ -0.33
NR1H3-225ENST00000494018 ZNF333Q96JL9 665 aa12.96□□□□□ -0.33
NR1H3-225ENST00000494018 PHACTR3Q96KR7 559 aa12.96□□□□□ -0.33
NR1H3-225ENST00000494018 POLLQ9UGP5 575 aa12.96□□□□□ -0.33
NR1H3-225ENST00000494018 KDM3BQ7LBC6 1761 aa12.95□□□□□ -0.34
NR1H3-225ENST00000494018 IGF2BP3O00425 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
NR1H3-225ENST00000494018 DDX46Q7L014 1031 aaKnown RBP12.95□□□□□ -0.34
NR1H3-225ENST00000494018 PPP1R42Q7Z4L9 355 aa12.95□□□□□ -0.34
NR1H3-225ENST00000494018 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
NR1H3-225ENST00000494018 ERO1AQ96HE7 468 aa12.95□□□□□ -0.34
NR1H3-225ENST00000494018 CFHR5Q9BXR6 569 aa12.95□□□□□ -0.34
NR1H3-225ENST00000494018 GPSM2P81274 684 aa12.94□□□□□ -0.34
NR1H3-225ENST00000494018 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
NR1H3-225ENST00000494018 GRAPQ13588 217 aa12.94□□□□□ -0.34
NR1H3-225ENST00000494018 SLC9C1Q4G0N8 1177 aa12.94□□□□□ -0.34
NR1H3-225ENST00000494018 SPRYD7Q5W111 196 aa12.94□□□□□ -0.34
NR1H3-225ENST00000494018 Q7L0L9 218 aa12.94□□□□□ -0.34
NR1H3-225ENST00000494018 GRAPLQ8TC17 118 aaPredicted RBP12.94□□□□□ -0.34
NR1H3-225ENST00000494018 SH3TC2Q8TF17 1288 aa12.94□□□□□ -0.34
NR1H3-225ENST00000494018 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
NR1H3-225ENST00000494018 PTCH2Q9Y6C5 1203 aa12.94□□□□□ -0.34
NR1H3-225ENST00000494018 ECM2O94769 699 aaPredicted RBP12.93□□□□□ -0.34
NR1H3-225ENST00000494018 VIL1P09327 827 aaKnown RBP12.93□□□□□ -0.34
NR1H3-225ENST00000494018 CRHR2Q13324 411 aa12.93□□□□□ -0.34
NR1H3-225ENST00000494018 NBPF9Q3BBW0 867 aa12.93□□□□□ -0.34
NR1H3-225ENST00000494018 MYOZ2Q9NPC6 264 aa12.93□□□□□ -0.34
NR1H3-225ENST00000494018 ANKRD36CQ5JPF3 1778 aa12.93□□□□□ -0.34
NR1H3-225ENST00000494018 ZNF609O15014 1411 aa12.93□□□□□ -0.34
NR1H3-225ENST00000494018 IBTKQ9P2D0 1353 aaPredicted RBP12.93□□□□□ -0.34
NR1H3-225ENST00000494018 COL4A1P02462 1669 aa12.93□□□□□ -0.34
NR1H3-225ENST00000494018 LAMB4A4D0S4 1761 aa12.92□□□□□ -0.34
NR1H3-225ENST00000494018 G3V3G9 751 aa12.92□□□□□ -0.34
NR1H3-225ENST00000494018 ALDH1A1P00352 501 aa12.92□□□□□ -0.34
NR1H3-225ENST00000494018 SLC10A5Q5PT55 438 aa12.92□□□□□ -0.34
NR1H3-225ENST00000494018 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
NR1H3-225ENST00000494018 THUMPD2Q9BTF0 503 aaKnown RBP12.92□□□□□ -0.34
NR1H3-225ENST00000494018 PRO3102Q9H379 93 aa12.92□□□□□ -0.34
NR1H3-225ENST00000494018 ZSWIM8A7E2V4 1837 aa12.92□□□□□ -0.34
NR1H3-225ENST00000494018 VCANP13611 3396 aa12.91□□□□□ -0.34
NR1H3-225ENST00000494018 GIGYF2Q6Y7W6 1299 aaKnown RBP12.91□□□□□ -0.34
NR1H3-225ENST00000494018 CELF1Q92879 486 aaKnown RBP12.91□□□□□ -0.34
NR1H3-225ENST00000494018 ANGEL1Q9UNK9 670 aaKnown RBP12.91□□□□□ -0.34
NR1H3-225ENST00000494018 KNSTRNQ9Y448 316 aa12.91□□□□□ -0.34
NR1H3-225ENST00000494018 DDX60Q8IY21 1712 aaKnown RBP12.91□□□□□ -0.34
NR1H3-225ENST00000494018 NF2P35240 595 aa12.9□□□□□ -0.34
NR1H3-225ENST00000494018 ZNF280AP59817 542 aaPredicted RBP12.9□□□□□ -0.34
NR1H3-225ENST00000494018 SP3Q02447 781 aa12.9□□□□□ -0.34
NR1H3-225ENST00000494018 NBPF11Q86T75 865 aa12.9□□□□□ -0.34
NR1H3-225ENST00000494018 DEFB123Q8N688 67 aa12.9□□□□□ -0.34
NR1H3-225ENST00000494018 CLMNQ96JQ2 1002 aa12.9□□□□□ -0.34
NR1H3-225ENST00000494018 MXD3Q9BW11 206 aa12.9□□□□□ -0.34
NR1H3-225ENST00000494018 LRRC37AA6NMS7 1700 aa12.9□□□□□ -0.34
NR1H3-225ENST00000494018 PRKAR2BP31323 418 aa12.89□□□□□ -0.35
NR1H3-225ENST00000494018 PARP10Q53GL7 1025 aa12.89□□□□□ -0.35
NR1H3-225ENST00000494018 RSBN1LQ6PCB5 846 aaPredicted RBP12.89□□□□□ -0.35
NR1H3-225ENST00000494018 ARMC9Q7Z3E5 817 aa12.89□□□□□ -0.35
NR1H3-225ENST00000494018 TBC1D16Q8TBP0 767 aa12.89□□□□□ -0.35
NR1H3-225ENST00000494018 SLC10A4Q96EP9 437 aa12.89□□□□□ -0.35
NR1H3-225ENST00000494018 MANSC4A6NHS7 340 aaPredicted RBP12.88□□□□□ -0.35
NR1H3-225ENST00000494018 ANXA1P04083 346 aa12.88□□□□□ -0.35
NR1H3-225ENST00000494018 USP17L8P0C7I0 530 aa12.88□□□□□ -0.35
NR1H3-225ENST00000494018 MTFR1Q15390 333 aa12.88□□□□□ -0.35
NR1H3-225ENST00000494018 RTF1Q92541 710 aaKnown RBP12.88□□□□□ -0.35
NR1H3-225ENST00000494018 SHISA4Q96DD7 197 aa12.88□□□□□ -0.35
NR1H3-225ENST00000494018 ZC3H12CQ9C0D7 883 aaKnown RBP12.88□□□□□ -0.35
NR1H3-225ENST00000494018 STAP2Q9UGK3 403 aa12.88□□□□□ -0.35
NR1H3-225ENST00000494018 SASH1O94885 1247 aa12.87□□□□□ -0.35
NR1H3-225ENST00000494018 WNK4Q96J92 1243 aa12.87□□□□□ -0.35
NR1H3-225ENST00000494018 EYA3Q99504 573 aa12.87□□□□□ -0.35
NR1H3-225ENST00000494018 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
NR1H3-225ENST00000494018 CC2D1BQ5T0F9 858 aaKnown RBP12.86□□□□□ -0.35
NR1H3-225ENST00000494018 LDLRAD1Q5T700 205 aa12.86□□□□□ -0.35
NR1H3-225ENST00000494018 AGBL3Q8NEM8 1001 aa12.86□□□□□ -0.35
NR1H3-225ENST00000494018 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
NR1H3-225ENST00000494018 PTPN18Q99952 460 aa12.86□□□□□ -0.35
NR1H3-225ENST00000494018 RAPGEFL1Q9UHV5 662 aa12.86□□□□□ -0.35
NR1H3-225ENST00000494018 ZBTB7BO15156 539 aaPredicted RBP12.85□□□□□ -0.35
NR1H3-225ENST00000494018 UFL1O94874 794 aa12.85□□□□□ -0.35
NR1H3-225ENST00000494018 GJA5P36382 358 aa12.85□□□□□ -0.35
NR1H3-225ENST00000494018 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
NR1H3-225ENST00000494018 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
NR1H3-225ENST00000494018 NLRP10Q86W26 655 aa12.85□□□□□ -0.35
NR1H3-225ENST00000494018 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.85□□□□□ -0.35
NR1H3-225ENST00000494018 GMLQ99445 158 aa12.85□□□□□ -0.35
NR1H3-225ENST00000494018 ARHGAP39Q9C0H5 1083 aa12.85□□□□□ -0.35
NR1H3-225ENST00000494018 PSME4Q14997 1843 aa12.84□□□□□ -0.35
NR1H3-225ENST00000494018 WNT10BO00744 389 aa12.84□□□□□ -0.35
NR1H3-225ENST00000494018 INHBEP58166 350 aa12.84□□□□□ -0.35
NR1H3-225ENST00000494018 AIMP1Q12904 312 aaKnown RBP12.84□□□□□ -0.35
NR1H3-225ENST00000494018 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
NR1H3-225ENST00000494018 EYSQ5T1H1 3165 aa12.83□□□□□ -0.35
NR1H3-225ENST00000494018 PROSER3Q2NL68 480 aa12.83□□□□□ -0.36
NR1H3-225ENST00000494018 PRDM6Q9NQX0 595 aa12.83□□□□□ -0.36
NR1H3-225ENST00000494018 STXBP5LQ9Y2K9 1186 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms