RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.8□□□□□ -1.16
CPSF7-213ENST00000494016 ZFP42Q96MM3 310 aa7.8□□□□□ -1.16
CPSF7-213ENST00000494016 PURBQ96QR8 312 aaKnown RBP7.8□□□□□ -1.16
CPSF7-213ENST00000494016 PPP1R12CQ9BZL4 782 aa7.8□□□□□ -1.16
CPSF7-213ENST00000494016 TFIP11Q9UBB9 837 aaKnown RBP7.8□□□□□ -1.16
CPSF7-213ENST00000494016 POLKQ9UBT6 870 aa7.8□□□□□ -1.16
CPSF7-213ENST00000494016 AKAP12Q02952 1782 aa7.79□□□□□ -1.16
CPSF7-213ENST00000494016 PALM3A6NDB9 673 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-213ENST00000494016 ATP5J2-PTCD1G3V325 749 aa7.79□□□□□ -1.16
CPSF7-213ENST00000494016 SPINT1O43278 529 aa7.79□□□□□ -1.16
CPSF7-213ENST00000494016 DIAPH1O60610 1272 aaKnown RBP7.79□□□□□ -1.16
CPSF7-213ENST00000494016 BCAR3O75815 825 aa7.79□□□□□ -1.16
CPSF7-213ENST00000494016 PTGIRP43119 386 aa7.79□□□□□ -1.16
CPSF7-213ENST00000494016 RELBQ01201 579 aa7.79□□□□□ -1.16
CPSF7-213ENST00000494016 NCOA4Q13772 614 aa7.79□□□□□ -1.16
CPSF7-213ENST00000494016 EML3Q32P44 896 aa7.79□□□□□ -1.16
CPSF7-213ENST00000494016 SENP2Q9HC62 589 aa7.79□□□□□ -1.16
CPSF7-213ENST00000494016 CDC42BPGQ6DT37 1551 aa7.79□□□□□ -1.16
CPSF7-213ENST00000494016 EDC4Q6P2E9 1401 aaKnown RBP7.78□□□□□ -1.16
CPSF7-213ENST00000494016 NALCNQ8IZF0 1738 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 SRCAPQ6ZRS2 3230 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 USP17L3A6NCW0 530 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 USP17L4A6NCW7 530 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 BMP2P12643 396 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 TMPOP42166 694 aaKnown RBP7.78□□□□□ -1.16
CPSF7-213ENST00000494016 C6orf118Q5T5N4 469 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 USP17L2Q6R6M4 530 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 USP17L1Q7RTZ2 530 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 NME9Q86XW9 330 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 DEPDC4Q8N2C3 294 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 KIFC2Q96AC6 838 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 TRIM47Q96LD4 638 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 AMOTL2Q9Y2J4 779 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 MAFBQ9Y5Q3 323 aaPredicted RBP7.78□□□□□ -1.16
CPSF7-213ENST00000494016 ADGRB2O60241 1585 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 MON2Q7Z3U7 1717 aa7.78□□□□□ -1.16
CPSF7-213ENST00000494016 U2SURPO15042 1029 aaKnown RBP7.77□□□□□ -1.17
CPSF7-213ENST00000494016 GNRH1P01148 92 aa7.77□□□□□ -1.17
CPSF7-213ENST00000494016 KCNA6P17658 529 aa7.77□□□□□ -1.17
CPSF7-213ENST00000494016 ZNF395Q9H8N7 513 aaPredicted RBP7.77□□□□□ -1.17
CPSF7-213ENST00000494016 NOD1Q9Y239 953 aa7.77□□□□□ -1.17
CPSF7-213ENST00000494016 AATKQ6ZMQ8 1374 aa7.76□□□□□ -1.17
CPSF7-213ENST00000494016 PHLPP1O60346 1717 aa7.76□□□□□ -1.17
CPSF7-213ENST00000494016 IL13P35225 146 aa7.76□□□□□ -1.17
CPSF7-213ENST00000494016 RARSP54136 660 aaKnown RBP7.76□□□□□ -1.17
CPSF7-213ENST00000494016 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.76□□□□□ -1.17
CPSF7-213ENST00000494016 ARID3AQ99856 593 aa7.76□□□□□ -1.17
CPSF7-213ENST00000494016 C1orf115Q9H7X2 142 aa7.76□□□□□ -1.17
CPSF7-213ENST00000494016 COL16A1Q07092 1604 aaPredicted RBP7.76□□□□□ -1.17
CPSF7-213ENST00000494016 TTC21BQ7Z4L5 1316 aa7.76□□□□□ -1.17
CPSF7-213ENST00000494016 ITSN1Q15811 1721 aa7.75□□□□□ -1.17
CPSF7-213ENST00000494016 A0A1W2PRU2 124 aa7.75□□□□□ -1.17
CPSF7-213ENST00000494016 PDE3AQ14432 1141 aa7.75□□□□□ -1.17
CPSF7-213ENST00000494016 INSM2Q96T92 566 aaPredicted RBP7.75□□□□□ -1.17
CPSF7-213ENST00000494016 PNNQ9H307 717 aaKnown RBP7.75□□□□□ -1.17
CPSF7-213ENST00000494016 PCDHGA11Q9Y5H2 935 aa7.75□□□□□ -1.17
CPSF7-213ENST00000494016 TOPAZ1Q8N9V7 1692 aa7.75□□□□□ -1.17
CPSF7-213ENST00000494016 ACEP12821 1306 aa7.75□□□□□ -1.17
CPSF7-213ENST00000494016 SOS2Q07890 1332 aaPredicted RBP7.75□□□□□ -1.17
CPSF7-213ENST00000494016 IL16Q14005 1332 aa7.75□□□□□ -1.17
CPSF7-213ENST00000494016 KDM2BQ8NHM5 1336 aa7.75□□□□□ -1.17
CPSF7-213ENST00000494016 FANCIQ9NVI1 1328 aa7.75□□□□□ -1.17
CPSF7-213ENST00000494016 HMGB1P09429 215 aaKnown RBP7.74□□□□□ -1.17
CPSF7-213ENST00000494016 LMOD1P29536 600 aaPredicted RBP7.74□□□□□ -1.17
CPSF7-213ENST00000494016 RIPK4P57078 832 aa7.74□□□□□ -1.17
CPSF7-213ENST00000494016 CLN3Q13286 438 aa7.74□□□□□ -1.17
CPSF7-213ENST00000494016 COG3Q96JB2 828 aa7.74□□□□□ -1.17
CPSF7-213ENST00000494016 PHACTR3Q96KR7 559 aa7.74□□□□□ -1.17
CPSF7-213ENST00000494016 ARHGEF10LQ9HCE6 1279 aa7.74□□□□□ -1.17
CPSF7-213ENST00000494016 MKRN1Q9UHC7 482 aaKnown RBP7.74□□□□□ -1.17
CPSF7-213ENST00000494016 SERPINA10Q9UK55 444 aa7.74□□□□□ -1.17
CPSF7-213ENST00000494016 SSH2Q76I76 1423 aa7.74□□□□□ -1.17
CPSF7-213ENST00000494016 RGPD8O14715 1765 aaPredicted RBP7.74□□□□□ -1.17
CPSF7-213ENST00000494016 TCERG1O14776 1098 aaKnown RBP7.73□□□□□ -1.17
CPSF7-213ENST00000494016 PPM1GO15355 546 aaPredicted RBP7.73□□□□□ -1.17
CPSF7-213ENST00000494016 CDK11BP21127 795 aaKnown RBP7.73□□□□□ -1.17
CPSF7-213ENST00000494016 CTSOP43234 321 aaPredicted RBP7.73□□□□□ -1.17
CPSF7-213ENST00000494016 GTF2IP78347 998 aa7.73□□□□□ -1.17
CPSF7-213ENST00000494016 TRIM50Q86XT4 487 aa7.73□□□□□ -1.17
CPSF7-213ENST00000494016 SLC16A10Q8TF71 515 aa7.73□□□□□ -1.17
CPSF7-213ENST00000494016 CCDC97Q96F63 343 aaPredicted RBP7.73□□□□□ -1.17
CPSF7-213ENST00000494016 MYH16Q9H6N6 1097 aa7.73□□□□□ -1.17
CPSF7-213ENST00000494016 MSH6P52701 1360 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 NRKQ7Z2Y5 1582 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 NHSL1Q5SYE7 1610 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 AHDC1Q5TGY3 1603 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-213ENST00000494016 TTLL8A6PVC2 850 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 IL2RAP01589 272 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 PRKAR2BP31323 418 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 RNF144AP50876 292 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-213ENST00000494016 SCNN1DP51172 638 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 EXOSC9Q06265 439 aaKnown RBP7.72□□□□□ -1.17
CPSF7-213ENST00000494016 RRS1Q15050 365 aaKnown RBP7.72□□□□□ -1.17
CPSF7-213ENST00000494016 ESCO1Q5FWF5 840 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 FOXD4L5Q5VV16 416 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-213ENST00000494016 PANK1Q8TE04 598 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 XAGE2Q96GT9 111 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 ETNK1Q9HBU6 452 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 POLMQ9NP87 494 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-213ENST00000494016 RAB6BQ9NRW1 208 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms