RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.51	□□□□□ -0.41
MACF1-222	ENST00000494012	PRELP	P51888	382 aa		12.5	□□□□□ -0.41
MACF1-222	ENST00000494012	GPSM2	P81274	684 aa		12.5	□□□□□ -0.41
MACF1-222	ENST00000494012	JDP2	Q8WYK2	163 aa		12.5	□□□□□ -0.41
MACF1-222	ENST00000494012	EYA3	Q99504	573 aa		12.5	□□□□□ -0.41
MACF1-222	ENST00000494012	ANKRD2	Q9GZV1	360 aa		12.5	□□□□□ -0.41
MACF1-222	ENST00000494012	LRRFIP2	Q9Y608	721 aa	Known RBP	12.5	□□□□□ -0.41
MACF1-222	ENST00000494012	PPIP5K2	O43314	1243 aa		12.49	□□□□□ -0.41
MACF1-222	ENST00000494012	GNAI2	P04899	355 aa		12.49	□□□□□ -0.41
MACF1-222	ENST00000494012	RLBP1	P12271	317 aa		12.49	□□□□□ -0.41
MACF1-222	ENST00000494012	LDHAL6A	Q6ZMR3	332 aa		12.49	□□□□□ -0.41
MACF1-222	ENST00000494012	SLC51A	Q86UW1	340 aa		12.49	□□□□□ -0.41
MACF1-222	ENST00000494012	LARGE2	Q8N3Y3	721 aa		12.49	□□□□□ -0.41
MACF1-222	ENST00000494012	CHMP4B	Q9H444	224 aa	Known RBP	12.49	□□□□□ -0.41
MACF1-222	ENST00000494012	GGA1	Q9UJY5	639 aa		12.49	□□□□□ -0.41
MACF1-222	ENST00000494012	MINPP1	Q9UNW1	487 aa		12.49	□□□□□ -0.41
MACF1-222	ENST00000494012	KDM2B	Q8NHM5	1336 aa		12.48	□□□□□ -0.41
MACF1-222	ENST00000494012	C6orf229	H3BNL8	230 aa		12.48	□□□□□ -0.41
MACF1-222	ENST00000494012	UFL1	O94874	794 aa		12.48	□□□□□ -0.41
MACF1-222	ENST00000494012	KIAA2012	Q0VF49	1180 aa		12.48	□□□□□ -0.41
MACF1-222	ENST00000494012	PDE3A	Q14432	1141 aa		12.48	□□□□□ -0.41
MACF1-222	ENST00000494012	MVP	Q14764	893 aa	Known RBP	12.48	□□□□□ -0.41
MACF1-222	ENST00000494012	AOC3	Q16853	763 aa		12.48	□□□□□ -0.41
MACF1-222	ENST00000494012	WASHC4	Q2M389	1173 aa		12.48	□□□□□ -0.41
MACF1-222	ENST00000494012	TBC1D16	Q8TBP0	767 aa		12.48	□□□□□ -0.41
MACF1-222	ENST00000494012	PANK1	Q8TE04	598 aa		12.48	□□□□□ -0.41
MACF1-222	ENST00000494012	CNNM1	Q9NRU3	951 aa		12.48	□□□□□ -0.41
MACF1-222	ENST00000494012	DDX19B	Q9UMR2	479 aa		12.48	□□□□□ -0.41
MACF1-222	ENST00000494012	PLIN1	O60240	522 aa		12.47	□□□□□ -0.41
MACF1-222	ENST00000494012	ATP2B4	P23634	1241 aa		12.47	□□□□□ -0.41
MACF1-222	ENST00000494012	IFFO2	Q5TF58	517 aa		12.47	□□□□□ -0.41
MACF1-222	ENST00000494012	DPY19L2	Q6NUT2	758 aa		12.47	□□□□□ -0.41
MACF1-222	ENST00000494012	NIM1K	Q8IY84	436 aa		12.47	□□□□□ -0.41
MACF1-222	ENST00000494012	ZNF594	Q96JF6	807 aa	Predicted RBP	12.47	□□□□□ -0.41
MACF1-222	ENST00000494012	COL4A5	P29400	1685 aa		12.47	□□□□□ -0.41
MACF1-222	ENST00000494012	MED23	Q9ULK4	1368 aa		12.46	□□□□□ -0.41
MACF1-222	ENST00000494012	MROH5	Q6ZUA9	1318 aa		12.46	□□□□□ -0.41
MACF1-222	ENST00000494012	ZBTB7B	O15156	539 aa	Predicted RBP	12.46	□□□□□ -0.41
MACF1-222	ENST00000494012	KCNJ4	P48050	445 aa		12.46	□□□□□ -0.41
MACF1-222	ENST00000494012	CHRND	Q07001	517 aa		12.46	□□□□□ -0.41
MACF1-222	ENST00000494012	MTX1	Q13505	466 aa		12.46	□□□□□ -0.41
MACF1-222	ENST00000494012	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.46	□□□□□ -0.41
MACF1-222	ENST00000494012	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.46	□□□□□ -0.41
MACF1-222	ENST00000494012	POLL	Q9UGP5	575 aa		12.46	□□□□□ -0.41
MACF1-222	ENST00000494012	LEMD3	Q9Y2U8	911 aa		12.46	□□□□□ -0.41
MACF1-222	ENST00000494012	PSME4	Q14997	1843 aa		12.46	□□□□□ -0.42
MACF1-222	ENST00000494012	CEP350	Q5VT06	3117 aa		12.46	□□□□□ -0.42
MACF1-222	ENST00000494012	WDR90	Q96KV7	1748 aa		12.45	□□□□□ -0.42
MACF1-222	ENST00000494012	ZNF804B	A4D1E1	1349 aa		12.45	□□□□□ -0.42
MACF1-222	ENST00000494012	FZD9	O00144	591 aa		12.45	□□□□□ -0.42
MACF1-222	ENST00000494012	SRGAP3	O43295	1099 aa		12.45	□□□□□ -0.42
MACF1-222	ENST00000494012	EIF6	P56537	245 aa	Known RBP	12.45	□□□□□ -0.42
MACF1-222	ENST00000494012	FBXO3	Q9UK99	471 aa		12.45	□□□□□ -0.42
MACF1-222	ENST00000494012	ZNRF3	Q9ULT6	936 aa		12.45	□□□□□ -0.42
MACF1-222	ENST00000494012	COG6	Q9Y2V7	657 aa		12.45	□□□□□ -0.42
MACF1-222	ENST00000494012	SCN4A	P35499	1836 aa		12.45	□□□□□ -0.42
MACF1-222	ENST00000494012	GLTPD2	A6NH11	291 aa		12.44	□□□□□ -0.42
MACF1-222	ENST00000494012		G3V3G9	751 aa		12.44	□□□□□ -0.42
MACF1-222	ENST00000494012	CIAO1	O76071	339 aa		12.44	□□□□□ -0.42
MACF1-222	ENST00000494012	RRP1	P56182	461 aa	Known RBP	12.44	□□□□□ -0.42
MACF1-222	ENST00000494012	DCAF8	Q5TAQ9	597 aa		12.44	□□□□□ -0.42
MACF1-222	ENST00000494012	ZNF526	Q8TF50	670 aa	Predicted RBP	12.44	□□□□□ -0.42
MACF1-222	ENST00000494012	EYA2	O00167	538 aa		12.43	□□□□□ -0.42
MACF1-222	ENST00000494012	RIMBP2	O15034	1052 aa		12.43	□□□□□ -0.42
MACF1-222	ENST00000494012	RFX5	P48382	616 aa	Predicted RBP	12.43	□□□□□ -0.42
MACF1-222	ENST00000494012	PTPN12	Q05209	780 aa	Known RBP	12.43	□□□□□ -0.42
MACF1-222	ENST00000494012	METTL24	Q5JXM2	366 aa		12.43	□□□□□ -0.42
MACF1-222	ENST00000494012	GPC2	Q8N158	579 aa		12.43	□□□□□ -0.42
MACF1-222	ENST00000494012	KLHDC4	Q8TBB5	520 aa		12.43	□□□□□ -0.42
MACF1-222	ENST00000494012	COPRS	Q9NQ92	184 aa		12.43	□□□□□ -0.42
MACF1-222	ENST00000494012	ZNF541	Q9H0D2	1346 aa		12.42	□□□□□ -0.42
MACF1-222	ENST00000494012	ECE2	O60344	883 aa		12.42	□□□□□ -0.42
MACF1-222	ENST00000494012	TAF5L	O75529	589 aa		12.42	□□□□□ -0.42
MACF1-222	ENST00000494012	HELB	Q8NG08	1087 aa	Predicted RBP	12.42	□□□□□ -0.42
MACF1-222	ENST00000494012	GPR101	Q96P66	508 aa	Predicted RBP	12.42	□□□□□ -0.42
MACF1-222	ENST00000494012	PUS3	Q9BZE2	481 aa	Known RBP	12.42	□□□□□ -0.42
MACF1-222	ENST00000494012	C1orf115	Q9H7X2	142 aa		12.42	□□□□□ -0.42
MACF1-222	ENST00000494012	RIPOR2	Q9Y4F9	1068 aa		12.42	□□□□□ -0.42
MACF1-222	ENST00000494012	ARAP2	Q8WZ64	1704 aa		12.42	□□□□□ -0.42
MACF1-222	ENST00000494012	PDE8B	O95263	885 aa		12.41	□□□□□ -0.42
MACF1-222	ENST00000494012	IL15	P40933	162 aa	Predicted RBP	12.41	□□□□□ -0.42
MACF1-222	ENST00000494012	TNIP1	Q15025	636 aa		12.41	□□□□□ -0.42
MACF1-222	ENST00000494012	LRRC24	Q50LG9	513 aa		12.41	□□□□□ -0.42
MACF1-222	ENST00000494012	C20orf194	Q5TEA3	1177 aa		12.41	□□□□□ -0.42
MACF1-222	ENST00000494012	COA1	Q9GZY4	146 aa		12.41	□□□□□ -0.42
MACF1-222	ENST00000494012	SIL1	Q9H173	461 aa		12.41	□□□□□ -0.42
MACF1-222	ENST00000494012	DBNDD1	Q9H9R9	158 aa		12.41	□□□□□ -0.42
MACF1-222	ENST00000494012	SCN9A	Q15858	1988 aa		12.41	□□□□□ -0.42
MACF1-222	ENST00000494012	MYH13	Q9UKX3	1938 aa		12.41	□□□□□ -0.42
MACF1-222	ENST00000494012	PNMA6E	A0A0J9YXQ4	647 aa		12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	IQCA1L	A6NCM1	817 aa		12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	DDN	O94850	711 aa	Predicted RBP	12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	ATP8B2	P98198	1209 aa		12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	UBE4A	Q14139	1066 aa		12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	PUM3	Q15397	648 aa	Known RBP	12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	DOK7	Q18PE1	504 aa		12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	CIAPIN1	Q6FI81	312 aa		12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	C15orf52	Q6ZUT6	534 aa	Known RBP	12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	ZNF804A	Q7Z570	1209 aa		12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	PODN	Q7Z5L7	613 aa		12.4	□□□□□ -0.42

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