RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 SHTN1A0MZ66 631 aa10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 PSMD14O00487 310 aa10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 RIMBP2O15034 1052 aa10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 ECE2O60344 883 aa10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 AOC2O75106 756 aa10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 ZNF853P0CG23 659 aa10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 HSP90B1P14625 803 aaKnown RBP10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 RPS12P25398 132 aaKnown RBP10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 RPS8P62241 208 aaKnown RBP10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 GNAI1P63096 354 aa10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 GPSM2P81274 684 aa10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 CALD1Q05682 793 aaKnown RBP10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 RIC3Q7Z5B4 369 aa10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 ZBTB38Q8NAP3 1195 aaPredicted RBP10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 ABHD8Q96I13 439 aa10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 IFT57Q9NWB7 429 aa10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 POLLQ9UGP5 575 aa10.11□□□□□ -0.79
SEMA3F-209ENST00000493743 CA12O43570 354 aa10.1□□□□□ -0.79
SEMA3F-209ENST00000493743 KCNA4P22459 653 aa10.1□□□□□ -0.79
SEMA3F-209ENST00000493743 BRPF1P55201 1214 aaPredicted RBP10.1□□□□□ -0.79
SEMA3F-209ENST00000493743 SAMD7Q7Z3H4 446 aa10.1□□□□□ -0.79
SEMA3F-209ENST00000493743 USP48Q86UV5 1035 aa10.1□□□□□ -0.79
SEMA3F-209ENST00000493743 TBC1D16Q8TBP0 767 aa10.1□□□□□ -0.79
SEMA3F-209ENST00000493743 PHAXQ9H814 394 aaKnown RBP10.1□□□□□ -0.79
SEMA3F-209ENST00000493743 PRKRIP1Q9H875 184 aaPredicted RBP10.1□□□□□ -0.79
SEMA3F-209ENST00000493743 RTL9Q8NET4 1388 aa10.1□□□□□ -0.79
SEMA3F-209ENST00000493743 ZNF609O15014 1411 aa10.09□□□□□ -0.79
SEMA3F-209ENST00000493743 APAF1O14727 1248 aa10.09□□□□□ -0.79
SEMA3F-209ENST00000493743 DOK7Q18PE1 504 aa10.09□□□□□ -0.79
SEMA3F-209ENST00000493743 TBC1D10BQ4KMP7 808 aaPredicted RBP10.09□□□□□ -0.79
SEMA3F-209ENST00000493743 CCDC191Q8NCU4 936 aa10.09□□□□□ -0.79
SEMA3F-209ENST00000493743 MYD88Q99836 296 aa10.09□□□□□ -0.79
SEMA3F-209ENST00000493743 CHMP4AQ9BY43 222 aa10.09□□□□□ -0.79
SEMA3F-209ENST00000493743 ZC3H12CQ9C0D7 883 aaKnown RBP10.09□□□□□ -0.79
SEMA3F-209ENST00000493743 TSKSQ9UJT2 592 aa10.09□□□□□ -0.79
SEMA3F-209ENST00000493743 G3V3G9 751 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 ELL2O00472 640 aaPredicted RBP10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 ANP32CO43423 234 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 PDE8AO60658 829 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 UFL1O94874 794 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 DDX58O95786 925 aaKnown RBP10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 EGFRP00533 1210 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 PCCAP05165 728 aaPredicted RBP10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 HUNKP57058 714 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 NOGQ13253 232 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 CCDC152Q4G0S7 254 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 DCAF8Q5TAQ9 597 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 KRT26Q7Z3Y9 468 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 DCPSQ96C86 337 aaKnown RBP10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 SEC31BQ9NQW1 1179 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 KCNQ5Q9NR82 932 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 CWC25Q9NXE8 425 aaPredicted RBP10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 ANKIB1Q9P2G1 1089 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 GGA1Q9UJY5 639 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 A0A1B0GUL6 1792 aa10.08□□□□□ -0.8
SEMA3F-209ENST00000493743 ECM29Q5VYK3 1845 aa10.07□□□□□ -0.8
SEMA3F-209ENST00000493743 PAPPA2Q9BXP8 1791 aa10.07□□□□□ -0.8
SEMA3F-209ENST00000493743 CCER2I3L3R5 266 aa10.07□□□□□ -0.8
SEMA3F-209ENST00000493743 VIL1P09327 827 aaKnown RBP10.07□□□□□ -0.8
SEMA3F-209ENST00000493743 KIF4BQ2VIQ3 1234 aa10.07□□□□□ -0.8
SEMA3F-209ENST00000493743 RBM26Q5T8P6 1007 aaKnown RBP10.07□□□□□ -0.8
SEMA3F-209ENST00000493743 CCDC30Q5VVM6 783 aa10.07□□□□□ -0.8
SEMA3F-209ENST00000493743 C2orf69Q8N8R5 385 aa10.07□□□□□ -0.8
SEMA3F-209ENST00000493743 METTL22Q9BUU2 404 aaPredicted RBP10.07□□□□□ -0.8
SEMA3F-209ENST00000493743 GBA2Q9HCG7 927 aaPredicted RBP10.07□□□□□ -0.8
SEMA3F-209ENST00000493743 XDHP47989 1333 aa10.07□□□□□ -0.8
SEMA3F-209ENST00000493743 CCDC85CA6NKD9 419 aa10.06□□□□□ -0.8
SEMA3F-209ENST00000493743 ADM5C9JUS6 153 aa10.06□□□□□ -0.8
SEMA3F-209ENST00000493743 RGMBQ6NW40 437 aa10.06□□□□□ -0.8
SEMA3F-209ENST00000493743 DLK2Q6UY11 383 aa10.06□□□□□ -0.8
SEMA3F-209ENST00000493743 ANKRD18AQ8IVF6 992 aa10.06□□□□□ -0.8
SEMA3F-209ENST00000493743 SULF1Q8IWU6 871 aa10.06□□□□□ -0.8
SEMA3F-209ENST00000493743 C8orf58Q8NAV2 365 aa10.06□□□□□ -0.8
SEMA3F-209ENST00000493743 GGA3Q9NZ52 723 aa10.06□□□□□ -0.8
SEMA3F-209ENST00000493743 RSBN1LQ6PCB5 846 aaPredicted RBP10.05□□□□□ -0.8
SEMA3F-209ENST00000493743 AGBL3Q8NEM8 1001 aa10.05□□□□□ -0.8
SEMA3F-209ENST00000493743 JARID2Q92833 1246 aaPredicted RBP10.05□□□□□ -0.8
SEMA3F-209ENST00000493743 CCDC102AQ96A19 550 aa10.05□□□□□ -0.8
SEMA3F-209ENST00000493743 CCDC85AQ96PX6 553 aaPredicted RBP10.05□□□□□ -0.8
SEMA3F-209ENST00000493743 MAP3K2Q9Y2U5 619 aa10.05□□□□□ -0.8
SEMA3F-209ENST00000493743 FAM155AB1AL88 458 aaPredicted RBP10.04□□□□□ -0.8
SEMA3F-209ENST00000493743 ATP2B4P23634 1241 aa10.04□□□□□ -0.8
SEMA3F-209ENST00000493743 CTSWP56202 376 aa10.04□□□□□ -0.8
SEMA3F-209ENST00000493743 ZNF280AP59817 542 aaPredicted RBP10.04□□□□□ -0.8
SEMA3F-209ENST00000493743 NEXNQ0ZGT2 675 aa10.04□□□□□ -0.8
SEMA3F-209ENST00000493743 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
SEMA3F-209ENST00000493743 KSR2Q6VAB6 950 aa10.04□□□□□ -0.8
SEMA3F-209ENST00000493743 CDCA5Q96FF9 252 aa10.04□□□□□ -0.8
SEMA3F-209ENST00000493743 ZIC5Q96T25 663 aa10.04□□□□□ -0.8
SEMA3F-209ENST00000493743 CDC5LQ99459 802 aaKnown RBP10.04□□□□□ -0.8
SEMA3F-209ENST00000493743 MCOLN1Q9GZU1 580 aa10.04□□□□□ -0.8
SEMA3F-209ENST00000493743 MED23Q9ULK4 1368 aa10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 PI4KAP2A4QPH2 592 aa10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 IGKV5-2P06315 115 aa10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 USP17L8P0C7I0 530 aa10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 ZNF157P51786 506 aaPredicted RBP10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 ANGEL2Q5VTE6 544 aaKnown RBP10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 PODNQ7Z5L7 613 aa10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 MIER1Q8N108 512 aa10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 TSPYL6Q8N831 410 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms