RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 CTC1Q2NKJ3 1217 aa12.52□□□□□ -0.41
PRPF3-206ENST00000493553 ARMC2Q8NEN0 867 aa12.52□□□□□ -0.41
PRPF3-206ENST00000493553 IL27Q8NEV9 243 aa12.52□□□□□ -0.41
PRPF3-206ENST00000493553 SLAIN2Q9P270 581 aa12.52□□□□□ -0.41
PRPF3-206ENST00000493553 TNNQ9UQP3 1299 aa12.52□□□□□ -0.41
PRPF3-206ENST00000493553 LRRC37A3O60309 1634 aa12.51□□□□□ -0.41
PRPF3-206ENST00000493553 TATP17735 454 aaPredicted RBP12.51□□□□□ -0.41
PRPF3-206ENST00000493553 SMCPP49901 116 aaPredicted RBP12.51□□□□□ -0.41
PRPF3-206ENST00000493553 XPCQ01831 940 aaPredicted RBP12.51□□□□□ -0.41
PRPF3-206ENST00000493553 AAASQ9NRG9 546 aa12.51□□□□□ -0.41
PRPF3-206ENST00000493553 MED1Q15648 1581 aaPredicted RBP12.51□□□□□ -0.41
PRPF3-206ENST00000493553 ALS2Q96Q42 1657 aa12.51□□□□□ -0.41
PRPF3-206ENST00000493553 GNAI3P08754 354 aa12.5□□□□□ -0.41
PRPF3-206ENST00000493553 NUCB1Q02818 461 aa12.5□□□□□ -0.41
PRPF3-206ENST00000493553 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
PRPF3-206ENST00000493553 PXDNQ92626 1479 aa12.49□□□□□ -0.41
PRPF3-206ENST00000493553 SOS2Q07890 1332 aaPredicted RBP12.49□□□□□ -0.41
PRPF3-206ENST00000493553 ALDH1A1P00352 501 aa12.49□□□□□ -0.41
PRPF3-206ENST00000493553 BRINP3Q76B58 766 aa12.49□□□□□ -0.41
PRPF3-206ENST00000493553 ST8SIA5O15466 376 aa12.48□□□□□ -0.41
PRPF3-206ENST00000493553 RNMTO43148 476 aaKnown RBP12.48□□□□□ -0.41
PRPF3-206ENST00000493553 CSB-PGBD3P0DP91 1061 aa12.48□□□□□ -0.41
PRPF3-206ENST00000493553 MPNDQ8N594 471 aa12.48□□□□□ -0.41
PRPF3-206ENST00000493553 USHBP1Q8N6Y0 703 aa12.48□□□□□ -0.41
PRPF3-206ENST00000493553 NLRP2Q9NX02 1062 aa12.48□□□□□ -0.41
PRPF3-206ENST00000493553 CAMTA1Q9Y6Y1 1673 aa12.48□□□□□ -0.41
PRPF3-206ENST00000493553 ZC3H6P61129 1189 aaKnown RBP12.47□□□□□ -0.41
PRPF3-206ENST00000493553 FLIIQ13045 1269 aa12.47□□□□□ -0.41
PRPF3-206ENST00000493553 C8orf34Q49A92 452 aa12.47□□□□□ -0.41
PRPF3-206ENST00000493553 HDGFL1Q5TGJ6 251 aa12.47□□□□□ -0.41
PRPF3-206ENST00000493553 NBPF14Q5TI25 921 aa12.47□□□□□ -0.41
PRPF3-206ENST00000493553 CHD1LQ86WJ1 897 aa12.47□□□□□ -0.41
PRPF3-206ENST00000493553 NOP58Q9Y2X3 529 aaKnown RBP12.47□□□□□ -0.41
PRPF3-206ENST00000493553 CACNA1FO60840 1977 aa12.47□□□□□ -0.41
PRPF3-206ENST00000493553 PXDNLA1KZ92 1463 aa12.46□□□□□ -0.41
PRPF3-206ENST00000493553 FAM208AQ9UK61 1670 aaKnown RBP12.46□□□□□ -0.41
PRPF3-206ENST00000493553 BTBD11A6QL63 1104 aa12.46□□□□□ -0.41
PRPF3-206ENST00000493553 AXIN1O15169 862 aa12.46□□□□□ -0.41
PRPF3-206ENST00000493553 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
PRPF3-206ENST00000493553 IFNL2Q8IZJ0 200 aa12.46□□□□□ -0.41
PRPF3-206ENST00000493553 ANKRD44Q8N8A2 993 aa12.46□□□□□ -0.41
PRPF3-206ENST00000493553 FOXJ1Q92949 421 aa12.46□□□□□ -0.41
PRPF3-206ENST00000493553 LRRC59Q96AG4 307 aaKnown RBP12.46□□□□□ -0.41
PRPF3-206ENST00000493553 AP1G2O75843 785 aa12.45□□□□□ -0.42
PRPF3-206ENST00000493553 GNAI2P04899 355 aa12.45□□□□□ -0.42
PRPF3-206ENST00000493553 FKBP5Q13451 457 aaPredicted RBP12.45□□□□□ -0.42
PRPF3-206ENST00000493553 BPHLQ86WA6 291 aaPredicted RBP12.45□□□□□ -0.42
PRPF3-206ENST00000493553 FAM174AQ8TBP5 190 aa12.45□□□□□ -0.42
PRPF3-206ENST00000493553 LRRN4Q8WUT4 740 aa12.45□□□□□ -0.42
PRPF3-206ENST00000493553 DCAF5Q96JK2 942 aa12.45□□□□□ -0.42
PRPF3-206ENST00000493553 DCTPP1Q9H773 170 aa12.45□□□□□ -0.42
PRPF3-206ENST00000493553 MIS18AQ9NYP9 233 aa12.45□□□□□ -0.42
PRPF3-206ENST00000493553 DBF4Q9UBU7 674 aaPredicted RBP12.45□□□□□ -0.42
PRPF3-206ENST00000493553 LMO7Q8WWI1 1683 aa12.45□□□□□ -0.42
PRPF3-206ENST00000493553 STRCP1A6NGW2 1772 aa12.44□□□□□ -0.42
PRPF3-206ENST00000493553 RFC5P40937 340 aa12.44□□□□□ -0.42
PRPF3-206ENST00000493553 ZNF787Q6DD87 383 aa12.44□□□□□ -0.42
PRPF3-206ENST00000493553 HPS1Q92902 700 aa12.44□□□□□ -0.42
PRPF3-206ENST00000493553 GPKOWQ92917 476 aaPredicted RBP eCLIP12.44□□□□□ -0.42
PRPF3-206ENST00000493553 PRDM11Q9NQV5 511 aa12.44□□□□□ -0.42
PRPF3-206ENST00000493553 RGS12O14924 1447 aa12.44□□□□□ -0.42
PRPF3-206ENST00000493553 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
PRPF3-206ENST00000493553 DDX58O95786 925 aaKnown RBP12.43□□□□□ -0.42
PRPF3-206ENST00000493553 BECN1Q14457 450 aa12.43□□□□□ -0.42
PRPF3-206ENST00000493553 KRT24Q2M2I5 525 aa12.43□□□□□ -0.42
PRPF3-206ENST00000493553 BMP2KLQ5H9B9 411 aa12.43□□□□□ -0.42
PRPF3-206ENST00000493553 HYPKQ9NX55 129 aa12.43□□□□□ -0.42
PRPF3-206ENST00000493553 TLL2Q9Y6L7 1015 aa12.43□□□□□ -0.42
PRPF3-206ENST00000493553 WASF2Q9Y6W5 498 aa12.43□□□□□ -0.42
PRPF3-206ENST00000493553 ZNF335Q9H4Z2 1342 aaPredicted RBP12.42□□□□□ -0.42
PRPF3-206ENST00000493553 C4orf48Q5BLP8 95 aa12.42□□□□□ -0.42
PRPF3-206ENST00000493553 ANKRD45Q5TZF3 282 aa12.42□□□□□ -0.42
PRPF3-206ENST00000493553 MPRIPQ6WCQ1 1025 aa12.42□□□□□ -0.42
PRPF3-206ENST00000493553 NPM2Q86SE8 214 aaKnown RBP12.42□□□□□ -0.42
PRPF3-206ENST00000493553 ANP32EQ9BTT0 268 aa12.42□□□□□ -0.42
PRPF3-206ENST00000493553 STRCQ7RTU9 1775 aa12.42□□□□□ -0.42
PRPF3-206ENST00000493553 WDR17Q8IZU2 1322 aa12.41□□□□□ -0.42
PRPF3-206ENST00000493553 PHKG2P15735 406 aa12.41□□□□□ -0.42
PRPF3-206ENST00000493553 AGERQ15109 404 aa12.41□□□□□ -0.42
PRPF3-206ENST00000493553 CEP85Q6P2H3 762 aa12.41□□□□□ -0.42
PRPF3-206ENST00000493553 SLC4A10Q6U841 1118 aa12.41□□□□□ -0.42
PRPF3-206ENST00000493553 SH3BP5LQ7L8J4 393 aa12.41□□□□□ -0.42
PRPF3-206ENST00000493553 SH3RF1Q7Z6J0 888 aa12.41□□□□□ -0.42
PRPF3-206ENST00000493553 SRCIN1Q9C0H9 1055 aa12.41□□□□□ -0.42
PRPF3-206ENST00000493553 SLC52A2Q9HAB3 445 aa12.41□□□□□ -0.42
PRPF3-206ENST00000493553 LGR6Q9HBX8 967 aa12.41□□□□□ -0.42
PRPF3-206ENST00000493553 HEG1Q9ULI3 1381 aa12.41□□□□□ -0.42
PRPF3-206ENST00000493553 ALDH1L1O75891 902 aa12.4□□□□□ -0.42
PRPF3-206ENST00000493553 USP17L8P0C7I0 530 aa12.4□□□□□ -0.42
PRPF3-206ENST00000493553 TMEM259Q4ZIN3 620 aa12.4□□□□□ -0.42
PRPF3-206ENST00000493553 CDK15Q96Q40 435 aa12.4□□□□□ -0.42
PRPF3-206ENST00000493553 CARD10Q9BWT7 1032 aa12.4□□□□□ -0.42
PRPF3-206ENST00000493553 FKBPLQ9UIM3 349 aa12.4□□□□□ -0.42
PRPF3-206ENST00000493553 PCDH11XQ9BZA7 1347 aa12.39□□□□□ -0.43
PRPF3-206ENST00000493553 PCDH11YQ9BZA8 1340 aa12.39□□□□□ -0.43
PRPF3-206ENST00000493553 GIGYF1O75420 1035 aaPredicted RBP12.39□□□□□ -0.43
PRPF3-206ENST00000493553 UBTFL1P0CB47 393 aaPredicted RBP12.39□□□□□ -0.43
PRPF3-206ENST00000493553 NR6A1Q15406 480 aa12.39□□□□□ -0.43
PRPF3-206ENST00000493553 HSP90AB4PQ58FF6 505 aa12.39□□□□□ -0.43
PRPF3-206ENST00000493553 TTC5Q8N0Z6 440 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms