RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 C21orf2O43822 256 aa9.4□□□□□ -0.9
CAB39-206ENST00000493540 OATP04181 439 aa9.4□□□□□ -0.9
CAB39-206ENST00000493540 DZIP3Q86Y13 1208 aaKnown RBP9.4□□□□□ -0.9
CAB39-206ENST00000493540 SLC4A5Q9BY07 1137 aa9.4□□□□□ -0.9
CAB39-206ENST00000493540 ECM29Q5VYK3 1845 aa9.4□□□□□ -0.91
CAB39-206ENST00000493540 CASP8AP2Q9UKL3 1982 aa9.39□□□□□ -0.91
CAB39-206ENST00000493540 ZNF541Q9H0D2 1346 aa9.39□□□□□ -0.91
CAB39-206ENST00000493540 BTBD11A6QL63 1104 aa9.39□□□□□ -0.91
CAB39-206ENST00000493540 TRIM66O15016 1216 aa9.39□□□□□ -0.91
CAB39-206ENST00000493540 HSPA1AP0DMV8 641 aaKnown RBP9.39□□□□□ -0.91
CAB39-206ENST00000493540 HSPA1BP0DMV9 641 aaKnown RBP9.39□□□□□ -0.91
CAB39-206ENST00000493540 PPP2R1AP30153 589 aa9.39□□□□□ -0.91
CAB39-206ENST00000493540 ERFEQ4G0M1 354 aa9.39□□□□□ -0.91
CAB39-206ENST00000493540 DMRTA1Q5VZB9 504 aa9.39□□□□□ -0.91
CAB39-206ENST00000493540 LRP10Q7Z4F1 713 aa9.39□□□□□ -0.91
CAB39-206ENST00000493540 PACS2Q86VP3 889 aa9.39□□□□□ -0.91
CAB39-206ENST00000493540 SETDB2Q96T68 719 aa9.39□□□□□ -0.91
CAB39-206ENST00000493540 TSKSQ9UJT2 592 aa9.39□□□□□ -0.91
CAB39-206ENST00000493540 FZD9O00144 591 aa9.38□□□□□ -0.91
CAB39-206ENST00000493540 ITGBL1O95965 494 aaPredicted RBP9.38□□□□□ -0.91
CAB39-206ENST00000493540 SNRPA1P09661 255 aaKnown RBP9.38□□□□□ -0.91
CAB39-206ENST00000493540 NPR1P16066 1061 aa9.38□□□□□ -0.91
CAB39-206ENST00000493540 ST5P78524 1137 aa9.38□□□□□ -0.91
CAB39-206ENST00000493540 FKBP4Q02790 459 aaKnown RBP eCLIP9.38□□□□□ -0.91
CAB39-206ENST00000493540 PROX2Q3B8N5 592 aa9.38□□□□□ -0.91
CAB39-206ENST00000493540 CCDC93Q567U6 631 aa9.38□□□□□ -0.91
CAB39-206ENST00000493540 BICDL1Q6ZP65 573 aa9.38□□□□□ -0.91
CAB39-206ENST00000493540 CCER1Q8TC90 406 aaPredicted RBP9.38□□□□□ -0.91
CAB39-206ENST00000493540 FAM198AQ9UFP1 575 aa9.38□□□□□ -0.91
CAB39-206ENST00000493540 ADGRG1Q9Y653 693 aa9.38□□□□□ -0.91
CAB39-206ENST00000493540 UBN2Q6ZU65 1347 aa9.37□□□□□ -0.91
CAB39-206ENST00000493540 U2SURPO15042 1029 aaKnown RBP9.37□□□□□ -0.91
CAB39-206ENST00000493540 DDNO94850 711 aaPredicted RBP9.37□□□□□ -0.91
CAB39-206ENST00000493540 FAM161AQ3B820 660 aa9.37□□□□□ -0.91
CAB39-206ENST00000493540 LDHDQ86WU2 507 aa9.37□□□□□ -0.91
CAB39-206ENST00000493540 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
CAB39-206ENST00000493540 PLEKHF1Q96S99 279 aa9.37□□□□□ -0.91
CAB39-206ENST00000493540 PSMD1Q99460 953 aa9.37□□□□□ -0.91
CAB39-206ENST00000493540 TAF1DQ9H5J8 278 aaPredicted RBP9.37□□□□□ -0.91
CAB39-206ENST00000493540 ZNF652Q9Y2D9 606 aa9.37□□□□□ -0.91
CAB39-206ENST00000493540 HTTP42858 3142 aa9.36□□□□□ -0.91
CAB39-206ENST00000493540 ERBB4Q15303 1308 aa9.36□□□□□ -0.91
CAB39-206ENST00000493540 IQCA1LA6NCM1 817 aa9.36□□□□□ -0.91
CAB39-206ENST00000493540 ERVV-1B6SEH8 477 aa9.36□□□□□ -0.91
CAB39-206ENST00000493540 HOXA10P31260 410 aaPredicted RBP9.36□□□□□ -0.91
CAB39-206ENST00000493540 PIP4K2AP48426 406 aaPredicted RBP9.36□□□□□ -0.91
CAB39-206ENST00000493540 MCM10Q7L590 875 aa9.36□□□□□ -0.91
CAB39-206ENST00000493540 ZNF622Q969S3 477 aaKnown RBP eCLIP9.36□□□□□ -0.91
CAB39-206ENST00000493540 KIAA1468Q9P260 1216 aa9.36□□□□□ -0.91
CAB39-206ENST00000493540 MAP3K15Q6ZN16 1313 aa9.35□□□□□ -0.91
CAB39-206ENST00000493540 RASSF10A6NK89 507 aa9.35□□□□□ -0.91
CAB39-206ENST00000493540 HLFQ16534 295 aa9.35□□□□□ -0.91
CAB39-206ENST00000493540 OLFM4Q6UX06 510 aa9.35□□□□□ -0.91
CAB39-206ENST00000493540 NBPF5PQ86XG9 351 aaPredicted RBP9.35□□□□□ -0.91
CAB39-206ENST00000493540 CFAP53Q96M91 514 aa9.35□□□□□ -0.91
CAB39-206ENST00000493540 RABGEF1Q9UJ41 708 aa9.35□□□□□ -0.91
CAB39-206ENST00000493540 VPS9D1Q9Y2B5 631 aa9.35□□□□□ -0.91
CAB39-206ENST00000493540 TK2O00142 265 aa9.34□□□□□ -0.91
CAB39-206ENST00000493540 NTSR2O95665 410 aa9.34□□□□□ -0.91
CAB39-206ENST00000493540 LSM11P83369 360 aaKnown RBP eCLIP9.34□□□□□ -0.91
CAB39-206ENST00000493540 PDE4DQ08499 809 aa9.34□□□□□ -0.91
CAB39-206ENST00000493540 NUDT18Q6ZVK8 323 aa9.34□□□□□ -0.91
CAB39-206ENST00000493540 METTL3Q86U44 580 aaKnown RBP9.34□□□□□ -0.91
CAB39-206ENST00000493540 RTKN2Q8IZC4 609 aa9.34□□□□□ -0.91
CAB39-206ENST00000493540 GPC2Q8N158 579 aa9.34□□□□□ -0.91
CAB39-206ENST00000493540 PXYLP1Q8TE99 480 aa9.34□□□□□ -0.91
CAB39-206ENST00000493540 TATDN2Q93075 761 aa9.34□□□□□ -0.91
CAB39-206ENST00000493540 PNMA3Q9UL41 463 aa9.34□□□□□ -0.91
CAB39-206ENST00000493540 NIP7Q9Y221 180 aaKnown RBP eCLIP9.34□□□□□ -0.91
CAB39-206ENST00000493540 RNF123Q5XPI4 1314 aa9.33□□□□□ -0.92
CAB39-206ENST00000493540 ZNF609O15014 1411 aa9.33□□□□□ -0.92
CAB39-206ENST00000493540 IARSP41252 1262 aaKnown RBP9.33□□□□□ -0.92
CAB39-206ENST00000493540 SCNN1DP51172 638 aa9.33□□□□□ -0.92
CAB39-206ENST00000493540 EIF4A1P60842 406 aaKnown RBP9.33□□□□□ -0.92
CAB39-206ENST00000493540 DCTN1Q14203 1278 aa9.33□□□□□ -0.92
CAB39-206ENST00000493540 TAF7Q15545 349 aaPredicted RBP9.33□□□□□ -0.92
CAB39-206ENST00000493540 AMHR2Q16671 573 aa9.33□□□□□ -0.92
CAB39-206ENST00000493540 TPTE2Q6XPS3 522 aa9.33□□□□□ -0.92
CAB39-206ENST00000493540 ZNF34Q8IZ26 560 aa9.33□□□□□ -0.92
CAB39-206ENST00000493540 TNS4Q8IZW8 715 aa9.33□□□□□ -0.92
CAB39-206ENST00000493540 PRDM10Q9NQV6 1147 aa9.33□□□□□ -0.92
CAB39-206ENST00000493540 ZNF330Q9Y3S2 320 aaPredicted RBP9.33□□□□□ -0.92
CAB39-206ENST00000493540 RBBP6Q7Z6E9 1792 aaKnown RBP9.32□□□□□ -0.92
CAB39-206ENST00000493540 ARAP2Q8WZ64 1704 aa9.32□□□□□ -0.92
CAB39-206ENST00000493540 FOXN1O15353 648 aa9.32□□□□□ -0.92
CAB39-206ENST00000493540 U2AF1L5P0DN76 240 aaPredicted RBP9.32□□□□□ -0.92
CAB39-206ENST00000493540 U2AF1Q01081 240 aaKnown RBP eCLIP9.32□□□□□ -0.92
CAB39-206ENST00000493540 NEUROD2Q15784 382 aa9.32□□□□□ -0.92
CAB39-206ENST00000493540 GRIPAP1Q4V328 841 aa9.32□□□□□ -0.92
CAB39-206ENST00000493540 CC2D2BQ6DHV5 1058 aa9.32□□□□□ -0.92
CAB39-206ENST00000493540 SLC51AQ86UW1 340 aa9.32□□□□□ -0.92
CAB39-206ENST00000493540 ZNF277Q9NRM2 450 aaPredicted RBP9.32□□□□□ -0.92
CAB39-206ENST00000493540 WBP1LQ9NX94 342 aa9.32□□□□□ -0.92
CAB39-206ENST00000493540 HACL1Q9UJ83 578 aa9.32□□□□□ -0.92
CAB39-206ENST00000493540 NUDCQ9Y266 331 aa9.32□□□□□ -0.92
CAB39-206ENST00000493540 TMEM88BA6NKF7 163 aa9.31□□□□□ -0.92
CAB39-206ENST00000493540 ALDH1B1P30837 517 aa9.31□□□□□ -0.92
CAB39-206ENST00000493540 EPHX2P34913 555 aa9.31□□□□□ -0.92
CAB39-206ENST00000493540 GIGYF2Q6Y7W6 1299 aaKnown RBP9.31□□□□□ -0.92
CAB39-206ENST00000493540 PNMA8AQ86V59 439 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms