RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 TBC1D16Q8TBP0 767 aa17.12■□□□□ 0.33
SNED1-212ENST00000493358 JARID2Q92833 1246 aaPredicted RBP17.12■□□□□ 0.33
SNED1-212ENST00000493358 POLLQ9UGP5 575 aa17.12■□□□□ 0.33
SNED1-212ENST00000493358 CNOT7Q9UIV1 285 aaKnown RBP17.12■□□□□ 0.33
SNED1-212ENST00000493358 RASSF10A6NK89 507 aa17.11■□□□□ 0.33
SNED1-212ENST00000493358 VEGFBP49765 207 aa17.11■□□□□ 0.33
SNED1-212ENST00000493358 CTSWP56202 376 aa17.11■□□□□ 0.33
SNED1-212ENST00000493358 FKBP5Q13451 457 aaPredicted RBP17.11■□□□□ 0.33
SNED1-212ENST00000493358 MICALL2Q8IY33 904 aa17.11■□□□□ 0.33
SNED1-212ENST00000493358 MYH16Q9H6N6 1097 aa17.11■□□□□ 0.33
SNED1-212ENST00000493358 PODXL2Q9NZ53 605 aa17.11■□□□□ 0.33
SNED1-212ENST00000493358 XDHP47989 1333 aa17.11■□□□□ 0.33
SNED1-212ENST00000493358 NEURL1BA8MQ27 555 aa17.1■□□□□ 0.33
SNED1-212ENST00000493358 PSMD14O00487 310 aa17.1■□□□□ 0.33
SNED1-212ENST00000493358 IGKV5-2P06315 115 aa17.1■□□□□ 0.33
SNED1-212ENST00000493358 RPS12P25398 132 aaKnown RBP17.1■□□□□ 0.33
SNED1-212ENST00000493358 ECE1P42892 770 aa17.1■□□□□ 0.33
SNED1-212ENST00000493358 FLIIQ13045 1269 aa17.1■□□□□ 0.33
SNED1-212ENST00000493358 DOK7Q18PE1 504 aa17.1■□□□□ 0.33
SNED1-212ENST00000493358 CWF19L2Q2TBE0 894 aaKnown RBP17.1■□□□□ 0.33
SNED1-212ENST00000493358 FAM9BQ8IZU0 186 aa17.1■□□□□ 0.33
SNED1-212ENST00000493358 TNS4Q8IZW8 715 aa17.1■□□□□ 0.33
SNED1-212ENST00000493358 ZC3H15Q8WU90 426 aaKnown RBP17.1■□□□□ 0.33
SNED1-212ENST00000493358 DPF2Q92785 391 aa17.1■□□□□ 0.33
SNED1-212ENST00000493358 THSD7BQ9C0I4 1608 aa17.1■□□□□ 0.33
SNED1-212ENST00000493358 UBE3BQ7Z3V4 1068 aa17.09■□□□□ 0.33
SNED1-212ENST00000493358 WDR33Q9C0J8 1336 aaKnown RBP17.08■□□□□ 0.32
SNED1-212ENST00000493358 TRAF5O00463 557 aa17.08■□□□□ 0.32
SNED1-212ENST00000493358 G2E3Q7L622 706 aa17.08■□□□□ 0.32
SNED1-212ENST00000493358 TRPM4Q8TD43 1214 aa17.08■□□□□ 0.32
SNED1-212ENST00000493358 DNAAF4Q8WXU2 420 aa17.08■□□□□ 0.32
SNED1-212ENST00000493358 GPR101Q96P66 508 aaPredicted RBP17.08■□□□□ 0.32
SNED1-212ENST00000493358 ZBTB12Q9Y330 459 aaPredicted RBP17.08■□□□□ 0.32
SNED1-212ENST00000493358 A0A1B0GUL6 1792 aa17.07■□□□□ 0.32
SNED1-212ENST00000493358 RTL9Q8NET4 1388 aa17.07■□□□□ 0.32
SNED1-212ENST00000493358 CELF2O95319 508 aaKnown RBP17.07■□□□□ 0.32
SNED1-212ENST00000493358 ATP2B4P23634 1241 aa17.07■□□□□ 0.32
SNED1-212ENST00000493358 IGHMBP2P38935 993 aaKnown RBP17.07■□□□□ 0.32
SNED1-212ENST00000493358 MAP2K1Q02750 393 aaPredicted RBP17.07■□□□□ 0.32
SNED1-212ENST00000493358 EXOSC9Q06265 439 aaKnown RBP17.07■□□□□ 0.32
SNED1-212ENST00000493358 GRM1Q13255 1194 aa17.07■□□□□ 0.32
SNED1-212ENST00000493358 CDC37L1Q7L3B6 337 aa17.07■□□□□ 0.32
SNED1-212ENST00000493358 TTLL11Q8NHH1 800 aa17.07■□□□□ 0.32
SNED1-212ENST00000493358 GLIS2Q9BZE0 524 aaPredicted RBP17.07■□□□□ 0.32
SNED1-212ENST00000493358 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
SNED1-212ENST00000493358 CTCFP49711 727 aaPredicted RBP17.06■□□□□ 0.32
SNED1-212ENST00000493358 GCKRQ14397 625 aa17.06■□□□□ 0.32
SNED1-212ENST00000493358 CAPNS2Q96L46 248 aa17.06■□□□□ 0.32
SNED1-212ENST00000493358 BEGAINQ9BUH8 593 aa17.06■□□□□ 0.32
SNED1-212ENST00000493358 GREM2Q9H772 168 aa17.06■□□□□ 0.32
SNED1-212ENST00000493358 VAMP4O75379 141 aa17.05■□□□□ 0.32
SNED1-212ENST00000493358 FMR1Q06787 632 aaKnown RBP eCLIP17.05■□□□□ 0.32
SNED1-212ENST00000493358 TBC1D10BQ4KMP7 808 aaPredicted RBP17.05■□□□□ 0.32
SNED1-212ENST00000493358 LINS1Q8NG48 757 aa17.05■□□□□ 0.32
SNED1-212ENST00000493358 BSDC1Q9NW68 430 aaPredicted RBP17.05■□□□□ 0.32
SNED1-212ENST00000493358 PGAP2Q9UHJ9 254 aa17.05■□□□□ 0.32
SNED1-212ENST00000493358 TLL2Q9Y6L7 1015 aa17.05■□□□□ 0.32
SNED1-212ENST00000493358 AKAP11Q9UKA4 1901 aa17.04■□□□□ 0.32
SNED1-212ENST00000493358 SHTN1A0MZ66 631 aa17.04■□□□□ 0.32
SNED1-212ENST00000493358 H7C1W4 665 aa17.04■□□□□ 0.32
SNED1-212ENST00000493358 FOXN1O15353 648 aa17.04■□□□□ 0.32
SNED1-212ENST00000493358 HIRAP54198 1017 aaPredicted RBP17.04■□□□□ 0.32
SNED1-212ENST00000493358 SAMD7Q7Z3H4 446 aa17.04■□□□□ 0.32
SNED1-212ENST00000493358 DCPSQ96C86 337 aaKnown RBP17.04■□□□□ 0.32
SNED1-212ENST00000493358 MPHOSPH8Q99549 860 aa17.04■□□□□ 0.32
SNED1-212ENST00000493358 MED23Q9ULK4 1368 aa17.03■□□□□ 0.32
SNED1-212ENST00000493358 VIL1P09327 827 aaKnown RBP17.03■□□□□ 0.32
SNED1-212ENST00000493358 KIF4BQ2VIQ3 1234 aa17.03■□□□□ 0.32
SNED1-212ENST00000493358 RBM26Q5T8P6 1007 aaKnown RBP17.03■□□□□ 0.32
SNED1-212ENST00000493358 CST9Q5W186 159 aa17.03■□□□□ 0.32
SNED1-212ENST00000493358 AGBL3Q8NEM8 1001 aa17.03■□□□□ 0.32
SNED1-212ENST00000493358 PLA2G12BQ9BX93 195 aa17.03■□□□□ 0.32
SNED1-212ENST00000493358 ZNF609O15014 1411 aa17.03■□□□□ 0.32
SNED1-212ENST00000493358 ZNF646O15015 1829 aaPredicted RBP17.03■□□□□ 0.32
SNED1-212ENST00000493358 CAPN15O75808 1086 aa17.02■□□□□ 0.32
SNED1-212ENST00000493358 CYP4F22Q6NT55 531 aa17.02■□□□□ 0.32
SNED1-212ENST00000493358 KRT26Q7Z3Y9 468 aa17.02■□□□□ 0.32
SNED1-212ENST00000493358 PODNQ7Z5L7 613 aa17.02■□□□□ 0.32
SNED1-212ENST00000493358 PRDM10Q9NQV6 1147 aa17.02■□□□□ 0.32
SNED1-212ENST00000493358 KCNQ5Q9NR82 932 aa17.02■□□□□ 0.32
SNED1-212ENST00000493358 WBP1LQ9NX94 342 aa17.02■□□□□ 0.32
SNED1-212ENST00000493358 MINPP1Q9UNW1 487 aa17.02■□□□□ 0.32
SNED1-212ENST00000493358 USP17L3A6NCW0 530 aa17.01■□□□□ 0.31
SNED1-212ENST00000493358 USP17L4A6NCW7 530 aa17.01■□□□□ 0.31
SNED1-212ENST00000493358 ITGA6P23229 1130 aa17.01■□□□□ 0.31
SNED1-212ENST00000493358 KCNJ4P48050 445 aa17.01■□□□□ 0.31
SNED1-212ENST00000493358 CCT4P50991 539 aaKnown RBP17.01■□□□□ 0.31
SNED1-212ENST00000493358 FAM161AQ3B820 660 aa17.01■□□□□ 0.31
SNED1-212ENST00000493358 RSBN1LQ6PCB5 846 aaPredicted RBP17.01■□□□□ 0.31
SNED1-212ENST00000493358 USP17L1Q7RTZ2 530 aa17.01■□□□□ 0.31
SNED1-212ENST00000493358 SAPCD2Q86UD0 394 aa17.01■□□□□ 0.31
SNED1-212ENST00000493358 USP48Q86UV5 1035 aa17.01■□□□□ 0.31
SNED1-212ENST00000493358 FBXW7Q969H0 707 aa17.01■□□□□ 0.31
SNED1-212ENST00000493358 ANKRD2Q9GZV1 360 aa17.01■□□□□ 0.31
SNED1-212ENST00000493358 CHMP3Q9Y3E7 222 aa17.01■□□□□ 0.31
SNED1-212ENST00000493358 ECM29Q5VYK3 1845 aa17■□□□□ 0.31
SNED1-212ENST00000493358 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
SNED1-212ENST00000493358 SULF1Q8IWU6 871 aa17■□□□□ 0.31
SNED1-212ENST00000493358 HHIPL1Q96JK4 782 aa17■□□□□ 0.31
SNED1-212ENST00000493358 LEMD3Q9Y2U8 911 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms