RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 KAZALD1Q96I82 304 aa17.29■□□□□ 0.36
SMTN-219ENST00000493335 NEUROD6Q96NK8 337 aa17.29■□□□□ 0.36
SMTN-219ENST00000493335 ANO10Q9NW15 660 aa17.29■□□□□ 0.36
SMTN-219ENST00000493335 PTPDC1A2A3K4 754 aa17.29■□□□□ 0.36
SMTN-219ENST00000493335 SNW1Q13573 536 aaKnown RBP17.29■□□□□ 0.36
SMTN-219ENST00000493335 TMEM2Q9UHN6 1383 aa17.28■□□□□ 0.36
SMTN-219ENST00000493335 ZSCAN16Q9H4T2 348 aaPredicted RBP17.28■□□□□ 0.36
SMTN-219ENST00000493335 SETD1BQ9UPS6 1966 aaKnown RBP17.28■□□□□ 0.36
SMTN-219ENST00000493335 SLU7O95391 586 aaKnown RBP17.28■□□□□ 0.36
SMTN-219ENST00000493335 MTX1Q13505 466 aa17.28■□□□□ 0.36
SMTN-219ENST00000493335 KRT32Q14532 448 aa17.28■□□□□ 0.36
SMTN-219ENST00000493335 RBM43Q6ZSC3 357 aaKnown RBP17.28■□□□□ 0.36
SMTN-219ENST00000493335 CCAR2Q8N163 923 aaKnown RBP17.28■□□□□ 0.36
SMTN-219ENST00000493335 MYD88Q99836 296 aa17.28■□□□□ 0.36
SMTN-219ENST00000493335 HMG20BQ9P0W2 317 aa17.28■□□□□ 0.36
SMTN-219ENST00000493335 ALDH1L1O75891 902 aa17.27■□□□□ 0.36
SMTN-219ENST00000493335 DDX58O95786 925 aaKnown RBP17.27■□□□□ 0.36
SMTN-219ENST00000493335 TFCP2Q12800 502 aa17.27■□□□□ 0.36
SMTN-219ENST00000493335 TMX1Q9H3N1 280 aa17.27■□□□□ 0.36
SMTN-219ENST00000493335 IFNKQ9P0W0 207 aa17.27■□□□□ 0.36
SMTN-219ENST00000493335 HDAC5Q9UQL6 1122 aa17.27■□□□□ 0.36
SMTN-219ENST00000493335 SLFN14P0C7P3 912 aa17.27■□□□□ 0.36
SMTN-219ENST00000493335 CCZ1BP86790 482 aa17.27■□□□□ 0.36
SMTN-219ENST00000493335 CCZ1P86791 482 aaPredicted RBP17.27■□□□□ 0.36
SMTN-219ENST00000493335 NEXNQ0ZGT2 675 aa17.27■□□□□ 0.36
SMTN-219ENST00000493335 EPHA10Q5JZY3 1008 aa17.27■□□□□ 0.36
SMTN-219ENST00000493335 LINS1Q8NG48 757 aa17.27■□□□□ 0.36
SMTN-219ENST00000493335 XRN1Q8IZH2 1706 aaKnown RBP17.27■□□□□ 0.36
SMTN-219ENST00000493335 TNRQ92752 1358 aa17.27■□□□□ 0.35
SMTN-219ENST00000493335 TUBGCP6Q96RT7 1819 aa17.27■□□□□ 0.35
SMTN-219ENST00000493335 A0A0G2JLW4 131 aa17.27■□□□□ 0.35
SMTN-219ENST00000493335 LRRN4CLQ8ND94 238 aa17.27■□□□□ 0.35
SMTN-219ENST00000493335 MRFAP1L1Q96HT8 127 aa17.27■□□□□ 0.35
SMTN-219ENST00000493335 BABAM1Q9NWV8 329 aa17.27■□□□□ 0.35
SMTN-219ENST00000493335 PXDNLA1KZ92 1463 aa17.26■□□□□ 0.35
SMTN-219ENST00000493335 GIGYF1O75420 1035 aaPredicted RBP17.26■□□□□ 0.35
SMTN-219ENST00000493335 DHX40Q8IX18 779 aaKnown RBP17.26■□□□□ 0.35
SMTN-219ENST00000493335 DBNDD2Q9BQY9 259 aa17.26■□□□□ 0.35
SMTN-219ENST00000493335 DBNLQ9UJU6 430 aaKnown RBP17.26■□□□□ 0.35
SMTN-219ENST00000493335 NPHP4O75161 1426 aaPredicted RBP17.26■□□□□ 0.35
SMTN-219ENST00000493335 GABPB1Q06547 395 aaPredicted RBP17.26■□□□□ 0.35
SMTN-219ENST00000493335 TERF2Q15554 542 aa17.26■□□□□ 0.35
SMTN-219ENST00000493335 ERO1AQ96HE7 468 aa17.26■□□□□ 0.35
SMTN-219ENST00000493335 ATP5J2-PTCD1G3V325 749 aa17.25■□□□□ 0.35
SMTN-219ENST00000493335 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
SMTN-219ENST00000493335 LMOD1P29536 600 aaPredicted RBP17.25■□□□□ 0.35
SMTN-219ENST00000493335 HSP90AA4PQ58FG1 418 aa17.25■□□□□ 0.35
SMTN-219ENST00000493335 CHMP4AQ9BY43 222 aa17.25■□□□□ 0.35
SMTN-219ENST00000493335 XPO4Q9C0E2 1151 aaKnown RBP17.25■□□□□ 0.35
SMTN-219ENST00000493335 NAT10Q9H0A0 1025 aaKnown RBP17.25■□□□□ 0.35
SMTN-219ENST00000493335 MORC2Q9Y6X9 1032 aaPredicted RBP17.25■□□□□ 0.35
SMTN-219ENST00000493335 NEMFO60524 1076 aa17.25■□□□□ 0.35
SMTN-219ENST00000493335 SFPQP23246 707 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMTN-219ENST00000493335 STK38Q15208 465 aa17.25■□□□□ 0.35
SMTN-219ENST00000493335 DPCR1Q3MIW9 517 aa17.25■□□□□ 0.35
SMTN-219ENST00000493335 PLEKHO1Q53GL0 409 aaPredicted RBP17.25■□□□□ 0.35
SMTN-219ENST00000493335 GOLIM4O00461 696 aa17.24■□□□□ 0.35
SMTN-219ENST00000493335 POLR3GO15318 223 aaPredicted RBP17.24■□□□□ 0.35
SMTN-219ENST00000493335 FAM160A1Q05DH4 1040 aa17.24■□□□□ 0.35
SMTN-219ENST00000493335 SYCP1Q15431 976 aa17.24■□□□□ 0.35
SMTN-219ENST00000493335 NSUN7Q8NE18 718 aaKnown RBP17.24■□□□□ 0.35
SMTN-219ENST00000493335 GJB4Q9NTQ9 266 aa17.24■□□□□ 0.35
SMTN-219ENST00000493335 TECPR2O15040 1411 aa17.24■□□□□ 0.35
SMTN-219ENST00000493335 CTAGE5O15320 804 aa17.24■□□□□ 0.35
SMTN-219ENST00000493335 CAVIN2O95810 425 aa17.24■□□□□ 0.35
SMTN-219ENST00000493335 RBM6P78332 1123 aaKnown RBP17.24■□□□□ 0.35
SMTN-219ENST00000493335 STOX1Q6ZVD7 989 aa17.24■□□□□ 0.35
SMTN-219ENST00000493335 NRXN3Q9Y4C0 1643 aa17.24■□□□□ 0.35
SMTN-219ENST00000493335 CDC25BP30305 580 aa17.24■□□□□ 0.35
SMTN-219ENST00000493335 NYAP1Q6ZVC0 841 aa17.24■□□□□ 0.35
SMTN-219ENST00000493335 UBE3BQ7Z3V4 1068 aa17.24■□□□□ 0.35
SMTN-219ENST00000493335 ZNF396Q96N95 335 aaPredicted RBP17.24■□□□□ 0.35
SMTN-219ENST00000493335 DNAI1Q9UI46 699 aa17.24■□□□□ 0.35
SMTN-219ENST00000493335 IGKV5-2P06315 115 aa17.23■□□□□ 0.35
SMTN-219ENST00000493335 HAND2P61296 217 aa17.23■□□□□ 0.35
SMTN-219ENST00000493335 ARHGAP29Q52LW3 1261 aa17.23■□□□□ 0.35
SMTN-219ENST00000493335 GPHNQ9NQX3 736 aaPredicted RBP17.23■□□□□ 0.35
SMTN-219ENST00000493335 U3KPZ7 1027 aaPredicted RBP17.23■□□□□ 0.35
SMTN-219ENST00000493335 COL15A1P39059 1388 aa17.23■□□□□ 0.35
SMTN-219ENST00000493335 SPATA31D1Q6ZQQ2 1576 aa17.23■□□□□ 0.35
SMTN-219ENST00000493335 DIP2BQ9P265 1576 aa17.23■□□□□ 0.35
SMTN-219ENST00000493335 NDUFA8P51970 172 aa17.23■□□□□ 0.35
SMTN-219ENST00000493335 GOLGA8FQ08AF8 430 aa17.23■□□□□ 0.35
SMTN-219ENST00000493335 GOLGA8DPQ0D2H9 430 aa17.23■□□□□ 0.35
SMTN-219ENST00000493335 MCMDC2Q4G0Z9 681 aa17.23■□□□□ 0.35
SMTN-219ENST00000493335 SARM1Q6SZW1 724 aa17.23■□□□□ 0.35
SMTN-219ENST00000493335 COPS6Q7L5N1 327 aa17.23■□□□□ 0.35
SMTN-219ENST00000493335 XAGE3Q8WTP9 111 aa17.23■□□□□ 0.35
SMTN-219ENST00000493335 AKAP12Q02952 1782 aa17.22■□□□□ 0.35
SMTN-219ENST00000493335 FAM208AQ9UK61 1670 aaKnown RBP17.22■□□□□ 0.35
SMTN-219ENST00000493335 MED23Q9ULK4 1368 aa17.22■□□□□ 0.35
SMTN-219ENST00000493335 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
SMTN-219ENST00000493335 NRDCO43847 1150 aa17.22■□□□□ 0.35
SMTN-219ENST00000493335 HOXB7P09629 217 aa17.22■□□□□ 0.35
SMTN-219ENST00000493335 AKAP4Q5JQC9 854 aa17.22■□□□□ 0.35
SMTN-219ENST00000493335 RCOR1Q9UKL0 485 aa17.22■□□□□ 0.35
SMTN-219ENST00000493335 PCDHA7Q9UN72 937 aa17.22■□□□□ 0.35
SMTN-219ENST00000493335 ADAMTS13Q76LX8 1427 aa17.22■□□□□ 0.35
SMTN-219ENST00000493335 ADD1P35611 737 aaKnown RBP17.22■□□□□ 0.35
SMTN-219ENST00000493335 TNNI3KQ59H18 835 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms