RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 CCDC85AQ96PX6 553 aaPredicted RBP17.23■□□□□ 0.35
IRF1-210ENST00000493208 SEC31BQ9NQW1 1179 aa17.23■□□□□ 0.35
IRF1-210ENST00000493208 ANKRD18BA2A2Z9 1011 aa17.22■□□□□ 0.35
IRF1-210ENST00000493208 MAP1SQ66K74 1059 aaPredicted RBP17.22■□□□□ 0.35
IRF1-210ENST00000493208 G2E3Q7L622 706 aa17.22■□□□□ 0.35
IRF1-210ENST00000493208 DBNDD1Q9H9R9 158 aa17.22■□□□□ 0.35
IRF1-210ENST00000493208 C9orf78Q9NZ63 289 aaPredicted RBP17.22■□□□□ 0.35
IRF1-210ENST00000493208 POLLQ9UGP5 575 aa17.22■□□□□ 0.35
IRF1-210ENST00000493208 KCNJ4P48050 445 aa17.21■□□□□ 0.35
IRF1-210ENST00000493208 HTRA3P83110 453 aa17.21■□□□□ 0.35
IRF1-210ENST00000493208 PODNQ7Z5L7 613 aa17.21■□□□□ 0.35
IRF1-210ENST00000493208 CNOT7Q9UIV1 285 aaKnown RBP17.21■□□□□ 0.35
IRF1-210ENST00000493208 ABT1Q9ULW3 272 aaKnown RBP17.21■□□□□ 0.35
IRF1-210ENST00000493208 LEMD3Q9Y2U8 911 aa17.21■□□□□ 0.35
IRF1-210ENST00000493208 ALDH1L1O75891 902 aa17.2■□□□□ 0.34
IRF1-210ENST00000493208 ITGBL1O95965 494 aaPredicted RBP17.2■□□□□ 0.34
IRF1-210ENST00000493208 MMP14P50281 582 aa17.2■□□□□ 0.34
IRF1-210ENST00000493208 IFIT5Q13325 482 aaKnown RBP17.2■□□□□ 0.34
IRF1-210ENST00000493208 TAF7LQ5H9L4 462 aa17.2■□□□□ 0.34
IRF1-210ENST00000493208 JARID2Q92833 1246 aaPredicted RBP17.2■□□□□ 0.34
IRF1-210ENST00000493208 AIDAQ96BJ3 306 aa17.2■□□□□ 0.34
IRF1-210ENST00000493208 SRCIN1Q9C0H9 1055 aa17.2■□□□□ 0.34
IRF1-210ENST00000493208 GREM2Q9H772 168 aa17.2■□□□□ 0.34
IRF1-210ENST00000493208 PTPRCP08575 1304 aa17.2■□□□□ 0.34
IRF1-210ENST00000493208 CT47B1P0C2W7 299 aaPredicted RBP17.19■□□□□ 0.34
IRF1-210ENST00000493208 ITGA6P23229 1130 aa17.19■□□□□ 0.34
IRF1-210ENST00000493208 ECE1P42892 770 aa17.19■□□□□ 0.34
IRF1-210ENST00000493208 SLC4A10Q6U841 1118 aa17.19■□□□□ 0.34
IRF1-210ENST00000493208 CDC37L1Q7L3B6 337 aa17.19■□□□□ 0.34
IRF1-210ENST00000493208 MICALL2Q8IY33 904 aa17.19■□□□□ 0.34
IRF1-210ENST00000493208 CHMP3Q9Y3E7 222 aa17.19■□□□□ 0.34
IRF1-210ENST00000493208 COL4A5P29400 1685 aa17.19■□□□□ 0.34
IRF1-210ENST00000493208 CNTNAP1P78357 1384 aa17.18■□□□□ 0.34
IRF1-210ENST00000493208 PSMD14O00487 310 aa17.18■□□□□ 0.34
IRF1-210ENST00000493208 DOK7Q18PE1 504 aa17.18■□□□□ 0.34
IRF1-210ENST00000493208 CCDC57Q2TAC2 916 aa17.18■□□□□ 0.34
IRF1-210ENST00000493208 AGBL3Q8NEM8 1001 aa17.18■□□□□ 0.34
IRF1-210ENST00000493208 MKRN1Q9UHC7 482 aaKnown RBP17.18■□□□□ 0.34
IRF1-210ENST00000493208 MYO3BQ8WXR4 1341 aa17.18■□□□□ 0.34
IRF1-210ENST00000493208 MED23Q9ULK4 1368 aa17.17■□□□□ 0.34
IRF1-210ENST00000493208 YDJCA8MPS7 323 aa17.17■□□□□ 0.34
IRF1-210ENST00000493208 GRM8O00222 908 aa17.17■□□□□ 0.34
IRF1-210ENST00000493208 DEFB115Q30KQ5 88 aa17.17■□□□□ 0.34
IRF1-210ENST00000493208 BEND3Q5T5X7 828 aa17.17■□□□□ 0.34
IRF1-210ENST00000493208 OGFOD1Q8N543 542 aa17.17■□□□□ 0.34
IRF1-210ENST00000493208 DCPSQ96C86 337 aaKnown RBP17.17■□□□□ 0.34
IRF1-210ENST00000493208 DUOX1Q9NRD9 1551 aa17.17■□□□□ 0.34
IRF1-210ENST00000493208 MINPP1Q9UNW1 487 aa17.17■□□□□ 0.34
IRF1-210ENST00000493208 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
IRF1-210ENST00000493208 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
IRF1-210ENST00000493208 CSF1RP07333 972 aa17.16■□□□□ 0.34
IRF1-210ENST00000493208 CCT4P50991 539 aaKnown RBP17.16■□□□□ 0.34
IRF1-210ENST00000493208 COA1Q9GZY4 146 aa17.16■□□□□ 0.34
IRF1-210ENST00000493208 ADAMTSL1Q8N6G6 1762 aa17.15■□□□□ 0.34
IRF1-210ENST00000493208 USP17L3A6NCW0 530 aa17.15■□□□□ 0.34
IRF1-210ENST00000493208 USP17L4A6NCW7 530 aa17.15■□□□□ 0.34
IRF1-210ENST00000493208 F6X3S4 739 aa17.15■□□□□ 0.34
IRF1-210ENST00000493208 VIL1P09327 827 aaKnown RBP17.15■□□□□ 0.34
IRF1-210ENST00000493208 FAM161AQ3B820 660 aa17.15■□□□□ 0.34
IRF1-210ENST00000493208 ALDH1L2Q3SY69 923 aa17.15■□□□□ 0.34
IRF1-210ENST00000493208 PAXIP1Q6ZW49 1069 aaPredicted RBP17.15■□□□□ 0.34
IRF1-210ENST00000493208 USP17L1Q7RTZ2 530 aa17.15■□□□□ 0.34
IRF1-210ENST00000493208 BEGAINQ9BUH8 593 aa17.15■□□□□ 0.34
IRF1-210ENST00000493208 SPINK5Q9NQ38 1064 aaPredicted RBP17.15■□□□□ 0.34
IRF1-210ENST00000493208 PGAP2Q9UHJ9 254 aa17.15■□□□□ 0.34
IRF1-210ENST00000493208 RASSF10A6NK89 507 aa17.14■□□□□ 0.33
IRF1-210ENST00000493208 RSBN1LQ6PCB5 846 aaPredicted RBP17.14■□□□□ 0.33
IRF1-210ENST00000493208 SLC51AQ86UW1 340 aa17.14■□□□□ 0.33
IRF1-210ENST00000493208 ZNF804BA4D1E1 1349 aa17.14■□□□□ 0.33
IRF1-210ENST00000493208 MYH3P11055 1940 aa17.13■□□□□ 0.33
IRF1-210ENST00000493208 MAP2K1Q02750 393 aaPredicted RBP17.13■□□□□ 0.33
IRF1-210ENST00000493208 SULF1Q8IWU6 871 aa17.13■□□□□ 0.33
IRF1-210ENST00000493208 CNNM1Q9NRU3 951 aa17.13■□□□□ 0.33
IRF1-210ENST00000493208 HDAC9Q9UKV0 1011 aa17.13■□□□□ 0.33
IRF1-210ENST00000493208 ZBTB12Q9Y330 459 aaPredicted RBP17.13■□□□□ 0.33
IRF1-210ENST00000493208 ZNF609O15014 1411 aa17.13■□□□□ 0.33
IRF1-210ENST00000493208 CELF2O95319 508 aaKnown RBP17.12■□□□□ 0.33
IRF1-210ENST00000493208 USP17L8P0C7I0 530 aa17.12■□□□□ 0.33
IRF1-210ENST00000493208 HSPA1AP0DMV8 641 aaKnown RBP17.12■□□□□ 0.33
IRF1-210ENST00000493208 HSPA1BP0DMV9 641 aaKnown RBP17.12■□□□□ 0.33
IRF1-210ENST00000493208 CASP7P55210 303 aa17.12■□□□□ 0.33
IRF1-210ENST00000493208 SLFN5Q08AF3 891 aa17.12■□□□□ 0.33
IRF1-210ENST00000493208 KIF4BQ2VIQ3 1234 aa17.12■□□□□ 0.33
IRF1-210ENST00000493208 FBXW7Q969H0 707 aa17.12■□□□□ 0.33
IRF1-210ENST00000493208 TAF1P21675 1872 aa17.12■□□□□ 0.33
IRF1-210ENST00000493208 TBC1D10BQ4KMP7 808 aaPredicted RBP17.11■□□□□ 0.33
IRF1-210ENST00000493208 STRIP1Q5VSL9 837 aa17.11■□□□□ 0.33
IRF1-210ENST00000493208 LMBR1LQ6UX01 489 aa17.11■□□□□ 0.33
IRF1-210ENST00000493208 LDHAL6AQ6ZMR3 332 aa17.11■□□□□ 0.33
IRF1-210ENST00000493208 KRT26Q7Z3Y9 468 aa17.11■□□□□ 0.33
IRF1-210ENST00000493208 ZNF804AQ7Z570 1209 aa17.11■□□□□ 0.33
IRF1-210ENST00000493208 HHIPL1Q96JK4 782 aa17.11■□□□□ 0.33
IRF1-210ENST00000493208 GPR101Q96P66 508 aaPredicted RBP17.11■□□□□ 0.33
IRF1-210ENST00000493208 SMC4Q9NTJ3 1288 aa17.11■□□□□ 0.33
IRF1-210ENST00000493208 LTBP1Q14766 1721 aa17.1■□□□□ 0.33
IRF1-210ENST00000493208 CHRNDQ07001 517 aa17.1■□□□□ 0.33
IRF1-210ENST00000493208 RBM26Q5T8P6 1007 aaKnown RBP17.1■□□□□ 0.33
IRF1-210ENST00000493208 SAMD7Q7Z3H4 446 aa17.1■□□□□ 0.33
IRF1-210ENST00000493208 TRPM4Q8TD43 1214 aa17.1■□□□□ 0.33
IRF1-210ENST00000493208 ZNF408Q9H9D4 720 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms