RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 NBPF5PQ86XG9 351 aaPredicted RBP9.6□□□□□ -0.87
SPTA1-208ENST00000492934 JMYQ8N9B5 988 aa9.6□□□□□ -0.87
SPTA1-208ENST00000492934 NKX2-3Q8TAU0 364 aa9.6□□□□□ -0.87
SPTA1-208ENST00000492934 TMUB1Q9BVT8 246 aa9.6□□□□□ -0.87
SPTA1-208ENST00000492934 RBM27Q9P2N5 1060 aaKnown RBP9.6□□□□□ -0.87
SPTA1-208ENST00000492934 ZNF652Q9Y2D9 606 aa9.6□□□□□ -0.87
SPTA1-208ENST00000492934 PPP2R1AP30153 589 aa9.59□□□□□ -0.87
SPTA1-208ENST00000492934 MLLT3P42568 568 aaPredicted RBP9.59□□□□□ -0.87
SPTA1-208ENST00000492934 SOGA3Q5TF21 947 aa9.59□□□□□ -0.87
SPTA1-208ENST00000492934 STYK1Q6J9G0 422 aa9.59□□□□□ -0.87
SPTA1-208ENST00000492934 TATDN2Q93075 761 aa9.59□□□□□ -0.87
SPTA1-208ENST00000492934 CNKSR1Q969H4 720 aa9.59□□□□□ -0.87
SPTA1-208ENST00000492934 FAM198AQ9UFP1 575 aa9.59□□□□□ -0.87
SPTA1-208ENST00000492934 USP16Q9Y5T5 823 aa9.59□□□□□ -0.87
SPTA1-208ENST00000492934 CCDC88AQ3V6T2 1871 aa9.59□□□□□ -0.87
SPTA1-208ENST00000492934 SLX4Q8IY92 1834 aa9.59□□□□□ -0.88
SPTA1-208ENST00000492934 DICER1Q9UPY3 1922 aaKnown RBP9.58□□□□□ -0.88
SPTA1-208ENST00000492934 NBPF26B4DH59 902 aa9.58□□□□□ -0.88
SPTA1-208ENST00000492934 SNRPA1P09661 255 aaKnown RBP9.58□□□□□ -0.88
SPTA1-208ENST00000492934 SRGNP10124 158 aa9.58□□□□□ -0.88
SPTA1-208ENST00000492934 DCTN1Q14203 1278 aa9.58□□□□□ -0.88
SPTA1-208ENST00000492934 CCDC93Q567U6 631 aa9.58□□□□□ -0.88
SPTA1-208ENST00000492934 SMYD5Q6GMV2 418 aa9.58□□□□□ -0.88
SPTA1-208ENST00000492934 MASTLQ96GX5 879 aa9.58□□□□□ -0.88
SPTA1-208ENST00000492934 PNMA3Q9UL41 463 aa9.58□□□□□ -0.88
SPTA1-208ENST00000492934 PCNTO95613 3336 aa9.58□□□□□ -0.88
SPTA1-208ENST00000492934 KDM3BQ7LBC6 1761 aa9.58□□□□□ -0.88
SPTA1-208ENST00000492934 FAM177BA6PVY3 158 aa9.57□□□□□ -0.88
SPTA1-208ENST00000492934 POTECB2RU33 542 aa9.57□□□□□ -0.88
SPTA1-208ENST00000492934 CLEC4GQ6UXB4 293 aa9.57□□□□□ -0.88
SPTA1-208ENST00000492934 NECTIN2Q92692 538 aa9.57□□□□□ -0.88
SPTA1-208ENST00000492934 NIP7Q9Y221 180 aaKnown RBP eCLIP9.57□□□□□ -0.88
SPTA1-208ENST00000492934 ABCC12Q96J65 1359 aa9.56□□□□□ -0.88
SPTA1-208ENST00000492934 SEMA3EO15041 775 aa9.56□□□□□ -0.88
SPTA1-208ENST00000492934 DDNO94850 711 aaPredicted RBP9.56□□□□□ -0.88
SPTA1-208ENST00000492934 NPR1P16066 1061 aa9.56□□□□□ -0.88
SPTA1-208ENST00000492934 COL13A1Q5TAT6 717 aaPredicted RBP9.56□□□□□ -0.88
SPTA1-208ENST00000492934 NBPF10Q6P3W6 841 aaKnown RBP9.56□□□□□ -0.88
SPTA1-208ENST00000492934 NBPF15Q8N660 670 aa9.56□□□□□ -0.88
SPTA1-208ENST00000492934 IQCA1LA6NCM1 817 aa9.55□□□□□ -0.88
SPTA1-208ENST00000492934 C3orf80F5H4A9 247 aa9.55□□□□□ -0.88
SPTA1-208ENST00000492934 HTATSF1O43719 755 aaKnown RBP9.55□□□□□ -0.88
SPTA1-208ENST00000492934 RNF40O75150 1001 aa9.55□□□□□ -0.88
SPTA1-208ENST00000492934 NEFMP07197 916 aa9.55□□□□□ -0.88
SPTA1-208ENST00000492934 HSPA1AP0DMV8 641 aaKnown RBP9.55□□□□□ -0.88
SPTA1-208ENST00000492934 HSPA1BP0DMV9 641 aaKnown RBP9.55□□□□□ -0.88
SPTA1-208ENST00000492934 CDHR5Q9HBB8 845 aa9.55□□□□□ -0.88
SPTA1-208ENST00000492934 ZNF541Q9H0D2 1346 aa9.55□□□□□ -0.88
SPTA1-208ENST00000492934 GTF2E1P29083 439 aaPredicted RBP9.54□□□□□ -0.88
SPTA1-208ENST00000492934 FKBP4Q02790 459 aaKnown RBP eCLIP9.54□□□□□ -0.88
SPTA1-208ENST00000492934 TAF7Q15545 349 aaPredicted RBP9.54□□□□□ -0.88
SPTA1-208ENST00000492934 PKDCCQ504Y2 493 aa9.54□□□□□ -0.88
SPTA1-208ENST00000492934 OLFM4Q6UX06 510 aa9.54□□□□□ -0.88
SPTA1-208ENST00000492934 TPTE2Q6XPS3 522 aa9.54□□□□□ -0.88
SPTA1-208ENST00000492934 TRIM67Q6ZTA4 783 aa9.54□□□□□ -0.88
SPTA1-208ENST00000492934 TNS4Q8IZW8 715 aa9.54□□□□□ -0.88
SPTA1-208ENST00000492934 ZNF277Q9NRM2 450 aaPredicted RBP9.54□□□□□ -0.88
SPTA1-208ENST00000492934 MIS18AQ9NYP9 233 aa9.54□□□□□ -0.88
SPTA1-208ENST00000492934 DLG5Q8TDM6 1919 aa9.53□□□□□ -0.88
SPTA1-208ENST00000492934 TESPA1A2RU30 521 aaPredicted RBP9.53□□□□□ -0.88
SPTA1-208ENST00000492934 DGAT1O75907 488 aa9.53□□□□□ -0.88
SPTA1-208ENST00000492934 HLFQ16534 295 aa9.53□□□□□ -0.88
SPTA1-208ENST00000492934 KIF6Q6ZMV9 814 aa9.53□□□□□ -0.88
SPTA1-208ENST00000492934 LDHDQ86WU2 507 aa9.53□□□□□ -0.88
SPTA1-208ENST00000492934 NGEFQ8N5V2 710 aa9.53□□□□□ -0.88
SPTA1-208ENST00000492934 C7orf43Q8WVR3 580 aa9.53□□□□□ -0.88
SPTA1-208ENST00000492934 NPDC1Q9NQX5 325 aaPredicted RBP9.53□□□□□ -0.88
SPTA1-208ENST00000492934 MKRN1Q9UHC7 482 aaKnown RBP9.53□□□□□ -0.88
SPTA1-208ENST00000492934 MAPK8IP3Q9UPT6 1336 aa9.53□□□□□ -0.88
SPTA1-208ENST00000492934 IBTKQ9P2D0 1353 aaPredicted RBP9.52□□□□□ -0.88
SPTA1-208ENST00000492934 SCN4AP35499 1836 aa9.52□□□□□ -0.89
SPTA1-208ENST00000492934 KLRG2A4D1S0 409 aaPredicted RBP9.52□□□□□ -0.89
SPTA1-208ENST00000492934 COPS2P61201 443 aa9.52□□□□□ -0.89
SPTA1-208ENST00000492934 RIC1Q4ADV7 1423 aa9.52□□□□□ -0.89
SPTA1-208ENST00000492934 EAPPQ56P03 285 aaPredicted RBP9.52□□□□□ -0.89
SPTA1-208ENST00000492934 NUTM1Q86Y26 1132 aa9.52□□□□□ -0.89
SPTA1-208ENST00000492934 SNED1Q8TER0 1413 aa9.52□□□□□ -0.89
SPTA1-208ENST00000492934 PNISRQ8TF01 805 aaKnown RBP9.52□□□□□ -0.89
SPTA1-208ENST00000492934 THUMPD2Q9BTF0 503 aaKnown RBP9.52□□□□□ -0.89
SPTA1-208ENST00000492934 NYXQ9GZU5 481 aa9.52□□□□□ -0.89
SPTA1-208ENST00000492934 TAF1DQ9H5J8 278 aaPredicted RBP9.52□□□□□ -0.89
SPTA1-208ENST00000492934 ADAMTSL1Q8N6G6 1762 aa9.52□□□□□ -0.89
SPTA1-208ENST00000492934 RNF123Q5XPI4 1314 aa9.52□□□□□ -0.89
SPTA1-208ENST00000492934 MAP3K15Q6ZN16 1313 aa9.52□□□□□ -0.89
SPTA1-208ENST00000492934 CNTNAP1P78357 1384 aa9.51□□□□□ -0.89
SPTA1-208ENST00000492934 MYL6BP14649 208 aa9.51□□□□□ -0.89
SPTA1-208ENST00000492934 GPTP24298 496 aa9.51□□□□□ -0.89
SPTA1-208ENST00000492934 IARSP41252 1262 aaKnown RBP9.51□□□□□ -0.89
SPTA1-208ENST00000492934 NFE2L2Q16236 605 aa9.51□□□□□ -0.89
SPTA1-208ENST00000492934 NUDT18Q6ZVK8 323 aa9.51□□□□□ -0.89
SPTA1-208ENST00000492934 RTKN2Q8IZC4 609 aa9.51□□□□□ -0.89
SPTA1-208ENST00000492934 RPGRQ92834 1020 aaKnown RBP9.51□□□□□ -0.89
SPTA1-208ENST00000492934 ZBTB3Q9H5J0 574 aa9.51□□□□□ -0.89
SPTA1-208ENST00000492934 HACL1Q9UJ83 578 aa9.51□□□□□ -0.89
SPTA1-208ENST00000492934 RRP7AQ9Y3A4 280 aaKnown RBP9.51□□□□□ -0.89
SPTA1-208ENST00000492934 COL4A5P29400 1685 aa9.51□□□□□ -0.89
SPTA1-208ENST00000492934 UBN2Q6ZU65 1347 aa9.51□□□□□ -0.89
SPTA1-208ENST00000492934 ALDH1B1P30837 517 aa9.5□□□□□ -0.89
SPTA1-208ENST00000492934 EPHX2P34913 555 aa9.5□□□□□ -0.89
SPTA1-208ENST00000492934 SLC19A1P41440 591 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms