RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 TRIM6-TRIM34B2RNG4 842 aa9.85□□□□□ -0.83
FDPS-218ENST00000492887 ERC2O15083 957 aa9.85□□□□□ -0.83
FDPS-218ENST00000492887 SASH1O94885 1247 aa9.85□□□□□ -0.83
FDPS-218ENST00000492887 GORABQ5T7V8 394 aa9.85□□□□□ -0.83
FDPS-218ENST00000492887 TTC22Q5TAA0 569 aa9.85□□□□□ -0.83
FDPS-218ENST00000492887 TSHZ3Q63HK5 1081 aa9.85□□□□□ -0.83
FDPS-218ENST00000492887 PRR5LQ6MZQ0 368 aa9.85□□□□□ -0.83
FDPS-218ENST00000492887 DDX46Q7L014 1031 aaKnown RBP9.85□□□□□ -0.83
FDPS-218ENST00000492887 PLEKHM2Q8IWE5 1019 aa9.85□□□□□ -0.83
FDPS-218ENST00000492887 NLGN1Q8N2Q7 840 aa9.85□□□□□ -0.83
FDPS-218ENST00000492887 RPGRQ92834 1020 aaKnown RBP9.85□□□□□ -0.83
FDPS-218ENST00000492887 CEP126Q9P2H0 1117 aa9.85□□□□□ -0.83
FDPS-218ENST00000492887 CHD4Q14839 1912 aa9.84□□□□□ -0.83
FDPS-218ENST00000492887 AKAP11Q9UKA4 1901 aa9.84□□□□□ -0.83
FDPS-218ENST00000492887 RIC1Q4ADV7 1423 aa9.84□□□□□ -0.83
FDPS-218ENST00000492887 CIAO1O76071 339 aa9.84□□□□□ -0.83
FDPS-218ENST00000492887 PDE1AP54750 535 aa9.84□□□□□ -0.83
FDPS-218ENST00000492887 TNNI3KQ59H18 835 aa9.84□□□□□ -0.83
FDPS-218ENST00000492887 CASC1Q6TDU7 716 aa9.84□□□□□ -0.83
FDPS-218ENST00000492887 RILPL2Q969X0 211 aa9.84□□□□□ -0.83
FDPS-218ENST00000492887 PUS3Q9BZE2 481 aaKnown RBP9.84□□□□□ -0.83
FDPS-218ENST00000492887 SEC31BQ9NQW1 1179 aa9.84□□□□□ -0.83
FDPS-218ENST00000492887 FBXO3Q9UK99 471 aa9.84□□□□□ -0.83
FDPS-218ENST00000492887 AKAP2Q9Y2D5 859 aa9.84□□□□□ -0.83
FDPS-218ENST00000492887 FPGT-TNNI3KV9GXZ4 949 aa9.84□□□□□ -0.83
FDPS-218ENST00000492887 COL4A1P02462 1669 aa9.83□□□□□ -0.84
FDPS-218ENST00000492887 POLRMTO00411 1230 aaKnown RBP9.83□□□□□ -0.84
FDPS-218ENST00000492887 MMP10P09238 476 aa9.83□□□□□ -0.84
FDPS-218ENST00000492887 DDR1Q08345 913 aa9.83□□□□□ -0.84
FDPS-218ENST00000492887 RTL9Q8NET4 1388 aa9.83□□□□□ -0.84
FDPS-218ENST00000492887 AOX1Q06278 1338 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 TTC41PQ6P2S7 1318 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 MROH5Q6ZUA9 1318 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 LRRC37AA6NMS7 1700 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 KIF13BQ9NQT8 1826 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 SPDYE2BA6NHP3 402 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 MAP4K4O95819 1239 aaPredicted RBP9.82□□□□□ -0.84
FDPS-218ENST00000492887 SPDYE6P0CI01 402 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 ATXN8OSP0DMR3 200 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 TM4SF1P30408 202 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 KCNJ4P48050 445 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 SF3B3Q15393 1217 aaKnown RBP9.82□□□□□ -0.84
FDPS-218ENST00000492887 ATP2B3Q16720 1220 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 SPDYE2Q495Y8 402 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 BMP2KLQ5H9B9 411 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 TTC39AQ5SRH9 613 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 C3orf67Q6ZVT6 689 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 CNTROBQ8N137 903 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 RBM17Q96I25 401 aaKnown RBP9.82□□□□□ -0.84
FDPS-218ENST00000492887 UPF2Q9HAU5 1272 aaKnown RBP9.82□□□□□ -0.84
FDPS-218ENST00000492887 DOCK2Q92608 1830 aa9.82□□□□□ -0.84
FDPS-218ENST00000492887 A0A1B0GUL7 405 aa9.81□□□□□ -0.84
FDPS-218ENST00000492887 CDC45O75419 566 aa9.81□□□□□ -0.84
FDPS-218ENST00000492887 GLRX3O76003 335 aaKnown RBP9.81□□□□□ -0.84
FDPS-218ENST00000492887 SLC5A1P13866 664 aa9.81□□□□□ -0.84
FDPS-218ENST00000492887 GSPT1P15170 499 aaKnown RBP9.81□□□□□ -0.84
FDPS-218ENST00000492887 SLC10A5Q5PT55 438 aa9.81□□□□□ -0.84
FDPS-218ENST00000492887 ATG9AQ7Z3C6 839 aa9.81□□□□□ -0.84
FDPS-218ENST00000492887 HELBQ8NG08 1087 aaPredicted RBP9.81□□□□□ -0.84
FDPS-218ENST00000492887 EAF2Q96CJ1 260 aaPredicted RBP9.81□□□□□ -0.84
FDPS-218ENST00000492887 DBNDD2Q9BQY9 259 aa9.81□□□□□ -0.84
FDPS-218ENST00000492887 ECHDC1Q9NTX5 307 aa9.81□□□□□ -0.84
FDPS-218ENST00000492887 TLR7Q9NYK1 1049 aaKnown RBP9.81□□□□□ -0.84
FDPS-218ENST00000492887 SLX4Q8IY92 1834 aa9.8□□□□□ -0.84
FDPS-218ENST00000492887 MFAP1P55081 439 aaKnown RBP9.8□□□□□ -0.84
FDPS-218ENST00000492887 CHRNDQ07001 517 aa9.8□□□□□ -0.84
FDPS-218ENST00000492887 GRAPQ13588 217 aa9.8□□□□□ -0.84
FDPS-218ENST00000492887 C8orf34Q49A92 452 aa9.8□□□□□ -0.84
FDPS-218ENST00000492887 CCDC158Q5M9N0 1113 aa9.8□□□□□ -0.84
FDPS-218ENST00000492887 GRAPLQ8TC17 118 aaPredicted RBP9.8□□□□□ -0.84
FDPS-218ENST00000492887 CELF1Q92879 486 aaKnown RBP9.8□□□□□ -0.84
FDPS-218ENST00000492887 UPF1Q92900 1129 aaKnown RBP eCLIP9.8□□□□□ -0.84
FDPS-218ENST00000492887 DNAJC2Q99543 621 aaKnown RBP9.8□□□□□ -0.84
FDPS-218ENST00000492887 BACH2Q9BYV9 841 aa9.8□□□□□ -0.84
FDPS-218ENST00000492887 BOLA2Q9H3K6 86 aa9.8□□□□□ -0.84
FDPS-218ENST00000492887 GPR108Q9NPR9 543 aa9.8□□□□□ -0.84
FDPS-218ENST00000492887 TSHZ2Q9NRE2 1034 aa9.8□□□□□ -0.84
FDPS-218ENST00000492887 SALL3Q9BXA9 1300 aa9.8□□□□□ -0.84
FDPS-218ENST00000492887 MAST2Q6P0Q8 1798 aa9.79□□□□□ -0.84
FDPS-218ENST00000492887 TAF5LO75529 589 aa9.79□□□□□ -0.84
FDPS-218ENST00000492887 IFIT1P09914 478 aaKnown RBP9.79□□□□□ -0.84
FDPS-218ENST00000492887 SDSP20132 328 aa9.79□□□□□ -0.84
FDPS-218ENST00000492887 PDE6BP35913 854 aa9.79□□□□□ -0.84
FDPS-218ENST00000492887 TIMM10P62072 90 aa9.79□□□□□ -0.84
FDPS-218ENST00000492887 PUM3Q15397 648 aaKnown RBP9.79□□□□□ -0.84
FDPS-218ENST00000492887 KLHL34Q8N239 644 aa9.79□□□□□ -0.84
FDPS-218ENST00000492887 ZNF622Q969S3 477 aaKnown RBP eCLIP9.79□□□□□ -0.84
FDPS-218ENST00000492887 XAGE2Q96GT9 111 aa9.79□□□□□ -0.84
FDPS-218ENST00000492887 TMX4Q9H1E5 349 aaPredicted RBP9.79□□□□□ -0.84
FDPS-218ENST00000492887 OSBPL3Q9H4L5 887 aa9.79□□□□□ -0.84
FDPS-218ENST00000492887 STAP2Q9UGK3 403 aa9.79□□□□□ -0.84
FDPS-218ENST00000492887 DBNLQ9UJU6 430 aaKnown RBP9.79□□□□□ -0.84
FDPS-218ENST00000492887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.79□□□□□ -0.84
FDPS-218ENST00000492887 BRCA1P38398 1863 aaKnown RBP9.79□□□□□ -0.84
FDPS-218ENST00000492887 PDE8BO95263 885 aa9.78□□□□□ -0.84
FDPS-218ENST00000492887 POLD1P28340 1107 aa9.78□□□□□ -0.84
FDPS-218ENST00000492887 ADORA1P30542 326 aa9.78□□□□□ -0.84
FDPS-218ENST00000492887 RPS8P62241 208 aaKnown RBP9.78□□□□□ -0.84
FDPS-218ENST00000492887 R3HDM1Q15032 1099 aaKnown RBP9.78□□□□□ -0.84
FDPS-218ENST00000492887 C2CD5Q86YS7 1000 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms