RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 WNT7AO00755 349 aa7.34□□□□□ -1.23
SND1-216ENST00000492840 IBSPP21815 317 aaPredicted RBP7.34□□□□□ -1.23
SND1-216ENST00000492840 ETFBP38117 255 aa7.34□□□□□ -1.23
SND1-216ENST00000492840 NBPF1Q3BBV0 1214 aa7.34□□□□□ -1.23
SND1-216ENST00000492840 C4orf17Q53FE4 359 aa7.34□□□□□ -1.23
SND1-216ENST00000492840 GNASQ5JWF2 1037 aa7.34□□□□□ -1.23
SND1-216ENST00000492840 NBPF10Q6P3W6 841 aaKnown RBP7.34□□□□□ -1.23
SND1-216ENST00000492840 ANKS3Q6ZW76 656 aa7.34□□□□□ -1.23
SND1-216ENST00000492840 ZCRB1Q8TBF4 217 aaKnown RBP7.34□□□□□ -1.23
SND1-216ENST00000492840 MRGPRX2Q96LB1 330 aa7.34□□□□□ -1.23
SND1-216ENST00000492840 RNPC3Q96LT9 517 aaKnown RBP7.34□□□□□ -1.23
SND1-216ENST00000492840 KRTAP3-3Q9BYR6 98 aa7.34□□□□□ -1.23
SND1-216ENST00000492840 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
SND1-216ENST00000492840 EFR3BQ9Y2G0 817 aa7.34□□□□□ -1.23
SND1-216ENST00000492840 NOP58Q9Y2X3 529 aaKnown RBP7.34□□□□□ -1.23
SND1-216ENST00000492840 RTCBQ9Y3I0 505 aaKnown RBP7.34□□□□□ -1.23
SND1-216ENST00000492840 GPC6Q9Y625 555 aaPredicted RBP7.34□□□□□ -1.23
SND1-216ENST00000492840 TOP2BQ02880 1626 aa7.34□□□□□ -1.24
SND1-216ENST00000492840 FGD5Q6ZNL6 1462 aa7.33□□□□□ -1.24
SND1-216ENST00000492840 EREGO14944 169 aa7.33□□□□□ -1.24
SND1-216ENST00000492840 RELBQ01201 579 aa7.33□□□□□ -1.24
SND1-216ENST00000492840 MAP3K10Q02779 954 aa7.33□□□□□ -1.24
SND1-216ENST00000492840 KCNC4Q03721 635 aa7.33□□□□□ -1.24
SND1-216ENST00000492840 PWP1Q13610 501 aa7.33□□□□□ -1.24
SND1-216ENST00000492840 CMTR1Q8N1G2 835 aaKnown RBP7.33□□□□□ -1.24
SND1-216ENST00000492840 C3orf58Q8NDZ4 430 aa7.33□□□□□ -1.24
SND1-216ENST00000492840 SRPK1Q96SB4 655 aaKnown RBP7.33□□□□□ -1.24
SND1-216ENST00000492840 GINM1Q9NU53 330 aa7.33□□□□□ -1.24
SND1-216ENST00000492840 STRIP2Q9ULQ0 834 aa7.33□□□□□ -1.24
SND1-216ENST00000492840 MRVI1Q9Y6F6 885 aa7.33□□□□□ -1.24
SND1-216ENST00000492840 GRIN2AQ12879 1464 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 F6X3S4 739 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 KLF4O43474 513 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 EIF4A3P38919 411 aaKnown RBP7.32□□□□□ -1.24
SND1-216ENST00000492840 SOX9P48436 509 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 ANAPC15P60006 121 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 GLIS3Q8NEA6 775 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 ITPKCQ96DU7 683 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 EAF1Q96JC9 268 aaPredicted RBP7.32□□□□□ -1.24
SND1-216ENST00000492840 TMEM74Q96NL1 305 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 TRIM56Q9BRZ2 755 aaKnown RBP7.32□□□□□ -1.24
SND1-216ENST00000492840 TRIM55Q9BYV6 548 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 GRIP2Q9C0E4 1043 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 ZNF395Q9H8N7 513 aaPredicted RBP7.32□□□□□ -1.24
SND1-216ENST00000492840 METTL14Q9HCE5 456 aaKnown RBP7.32□□□□□ -1.24
SND1-216ENST00000492840 SNTG2Q9NY99 539 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 KLHL42Q9P2K6 505 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 COL4A3BPQ9Y5P4 624 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 NUP160Q12769 1436 aa7.32□□□□□ -1.24
SND1-216ENST00000492840 ITGBL1O95965 494 aaPredicted RBP7.31□□□□□ -1.24
SND1-216ENST00000492840 GBP2P32456 591 aaPredicted RBP7.31□□□□□ -1.24
SND1-216ENST00000492840 VEGFBP49765 207 aa7.31□□□□□ -1.24
SND1-216ENST00000492840 RAB33AQ14088 237 aa7.31□□□□□ -1.24
SND1-216ENST00000492840 RASA3Q14644 834 aa7.31□□□□□ -1.24
SND1-216ENST00000492840 CCDC85BQ15834 202 aaPredicted RBP7.31□□□□□ -1.24
SND1-216ENST00000492840 LIAT1Q6ZQX7 453 aa7.31□□□□□ -1.24
SND1-216ENST00000492840 BTLAQ7Z6A9 289 aa7.31□□□□□ -1.24
SND1-216ENST00000492840 FILIP1Q7Z7B0 1213 aa7.31□□□□□ -1.24
SND1-216ENST00000492840 RELL1Q8IUW5 271 aa7.31□□□□□ -1.24
SND1-216ENST00000492840 C1orf127Q8N9H9 656 aa7.31□□□□□ -1.24
SND1-216ENST00000492840 HNRNPLLQ8WVV9 542 aaKnown RBP7.31□□□□□ -1.24
SND1-216ENST00000492840 AIDAQ96BJ3 306 aa7.31□□□□□ -1.24
SND1-216ENST00000492840 CNTN3Q9P232 1028 aa7.31□□□□□ -1.24
SND1-216ENST00000492840 MINDY4BA8MYZ0 360 aa7.3□□□□□ -1.24
SND1-216ENST00000492840 TATP17735 454 aaPredicted RBP7.3□□□□□ -1.24
SND1-216ENST00000492840 GRNP28799 593 aaKnown RBP7.3□□□□□ -1.24
SND1-216ENST00000492840 GPC1P35052 558 aa7.3□□□□□ -1.24
SND1-216ENST00000492840 PLEKHG4Q58EX7 1191 aa7.3□□□□□ -1.24
SND1-216ENST00000492840 SLC27A3Q5K4L6 730 aa7.3□□□□□ -1.24
SND1-216ENST00000492840 LHX8Q68G74 356 aa7.3□□□□□ -1.24
SND1-216ENST00000492840 ZNF296Q8WUU4 475 aaPredicted RBP7.3□□□□□ -1.24
SND1-216ENST00000492840 EMID1Q96A84 441 aaPredicted RBP7.3□□□□□ -1.24
SND1-216ENST00000492840 RHOVQ96L33 236 aa7.3□□□□□ -1.24
SND1-216ENST00000492840 DEPDC7Q96QD5 511 aa7.3□□□□□ -1.24
SND1-216ENST00000492840 KLF16Q9BXK1 252 aaPredicted RBP7.3□□□□□ -1.24
SND1-216ENST00000492840 PCDH12Q9NPG4 1184 aa7.3□□□□□ -1.24
SND1-216ENST00000492840 KCNQ5Q9NR82 932 aa7.3□□□□□ -1.24
SND1-216ENST00000492840 IFT57Q9NWB7 429 aa7.3□□□□□ -1.24
SND1-216ENST00000492840 ANKIB1Q9P2G1 1089 aa7.3□□□□□ -1.24
SND1-216ENST00000492840 U2SURPO15042 1029 aaKnown RBP7.29□□□□□ -1.24
SND1-216ENST00000492840 ZIC2O95409 532 aaPredicted RBP7.29□□□□□ -1.24
SND1-216ENST00000492840 ALDH1A1P00352 501 aa7.29□□□□□ -1.24
SND1-216ENST00000492840 ATP4AP20648 1035 aa7.29□□□□□ -1.24
SND1-216ENST00000492840 COL9A2Q14055 689 aaPredicted RBP7.29□□□□□ -1.24
SND1-216ENST00000492840 CTC1Q2NKJ3 1217 aa7.29□□□□□ -1.24
SND1-216ENST00000492840 KIAA0319Q5VV43 1072 aa7.29□□□□□ -1.24
SND1-216ENST00000492840 ANKRD24Q8TF21 1146 aa7.29□□□□□ -1.24
SND1-216ENST00000492840 NT5C1AQ9BXI3 368 aa7.29□□□□□ -1.24
SND1-216ENST00000492840 ZFAND3Q9H8U3 227 aa7.29□□□□□ -1.24
SND1-216ENST00000492840 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.29□□□□□ -1.24
SND1-216ENST00000492840 PPM1HQ9ULR3 514 aa7.29□□□□□ -1.24
SND1-216ENST00000492840 TRAK1Q9UPV9 953 aa7.29□□□□□ -1.24
SND1-216ENST00000492840 ABCA5Q8WWZ7 1642 aa7.29□□□□□ -1.24
SND1-216ENST00000492840 CCDC88BA6NC98 1476 aa7.29□□□□□ -1.24
SND1-216ENST00000492840 ADAMTS12P58397 1594 aa7.29□□□□□ -1.24
SND1-216ENST00000492840 ADCY10Q96PN6 1610 aa7.28□□□□□ -1.24
SND1-216ENST00000492840 FAM221BA6H8Z2 402 aa7.28□□□□□ -1.24
SND1-216ENST00000492840 DNAJC6O75061 913 aa7.28□□□□□ -1.24
SND1-216ENST00000492840 PRPF40BQ6NWY9 871 aaKnown RBP7.28□□□□□ -1.24
SND1-216ENST00000492840 BICDL1Q6ZP65 573 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms