RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 BCL2L13Q9BXK5 485 aa23.69■■□□□ 1.38
CHD1L-209ENST00000492728 VAMP4O75379 141 aa23.68■■□□□ 1.38
CHD1L-209ENST00000492728 HSP90B1P14625 803 aaKnown RBP23.68■■□□□ 1.38
CHD1L-209ENST00000492728 EXOSC9Q06265 439 aaKnown RBP23.68■■□□□ 1.38
CHD1L-209ENST00000492728 CST9Q5W186 159 aa23.68■■□□□ 1.38
CHD1L-209ENST00000492728 WDR63Q8IWG1 891 aa23.68■■□□□ 1.38
CHD1L-209ENST00000492728 WTIPA6NIX2 430 aaPredicted RBP23.67■■□□□ 1.38
CHD1L-209ENST00000492728 UFL1O94874 794 aa23.67■■□□□ 1.38
CHD1L-209ENST00000492728 MICALL2Q8IY33 904 aa23.67■■□□□ 1.38
CHD1L-209ENST00000492728 TTLL11Q8NHH1 800 aa23.67■■□□□ 1.38
CHD1L-209ENST00000492728 GREM2Q9H772 168 aa23.67■■□□□ 1.38
CHD1L-209ENST00000492728 CNOT7Q9UIV1 285 aaKnown RBP23.67■■□□□ 1.38
CHD1L-209ENST00000492728 SPEF2Q9C093 1822 aa23.66■■□□□ 1.38
CHD1L-209ENST00000492728 EGFRP00533 1210 aa23.66■■□□□ 1.38
CHD1L-209ENST00000492728 NEXNQ0ZGT2 675 aa23.66■■□□□ 1.38
CHD1L-209ENST00000492728 UBE3BQ7Z3V4 1068 aa23.66■■□□□ 1.38
CHD1L-209ENST00000492728 EYA3Q99504 573 aa23.66■■□□□ 1.38
CHD1L-209ENST00000492728 GLIS2Q9BZE0 524 aaPredicted RBP23.66■■□□□ 1.38
CHD1L-209ENST00000492728 PGAP2Q9UHJ9 254 aa23.66■■□□□ 1.38
CHD1L-209ENST00000492728 ABT1Q9ULW3 272 aaKnown RBP23.66■■□□□ 1.38
CHD1L-209ENST00000492728 MYH3P11055 1940 aa23.66■■□□□ 1.38
CHD1L-209ENST00000492728 TRPM7Q96QT4 1865 aa23.66■■□□□ 1.38
CHD1L-209ENST00000492728 H7C1W4 665 aa23.65■■□□□ 1.38
CHD1L-209ENST00000492728 CASP7P55210 303 aa23.65■■□□□ 1.38
CHD1L-209ENST00000492728 ANKRD18AQ8IVF6 992 aa23.65■■□□□ 1.38
CHD1L-209ENST00000492728 FAM9BQ8IZU0 186 aa23.65■■□□□ 1.38
CHD1L-209ENST00000492728 ANKIB1Q9P2G1 1089 aa23.65■■□□□ 1.38
CHD1L-209ENST00000492728 GGA1Q9UJY5 639 aa23.65■■□□□ 1.38
CHD1L-209ENST00000492728 THSD7BQ9C0I4 1608 aa23.65■■□□□ 1.38
CHD1L-209ENST00000492728 FOXN1O15353 648 aa23.64■■□□□ 1.37
CHD1L-209ENST00000492728 FKBP5Q13451 457 aaPredicted RBP23.64■■□□□ 1.37
CHD1L-209ENST00000492728 GCKRQ14397 625 aa23.64■■□□□ 1.37
CHD1L-209ENST00000492728 DEFB115Q30KQ5 88 aa23.64■■□□□ 1.37
CHD1L-209ENST00000492728 SAMD7Q7Z3H4 446 aa23.64■■□□□ 1.37
CHD1L-209ENST00000492728 DLK2Q6UY11 383 aa23.63■■□□□ 1.37
CHD1L-209ENST00000492728 DNAAF4Q8WXU2 420 aa23.63■■□□□ 1.37
CHD1L-209ENST00000492728 DPF2Q92785 391 aa23.63■■□□□ 1.37
CHD1L-209ENST00000492728 XDHP47989 1333 aa23.62■■□□□ 1.37
CHD1L-209ENST00000492728 ZC3H12CQ9C0D7 883 aaKnown RBP23.62■■□□□ 1.37
CHD1L-209ENST00000492728 TBC1D10BQ4KMP7 808 aaPredicted RBP23.61■■□□□ 1.37
CHD1L-209ENST00000492728 ZC3H15Q8WU90 426 aaKnown RBP23.61■■□□□ 1.37
CHD1L-209ENST00000492728 WDR33Q9C0J8 1336 aaKnown RBP23.6■■□□□ 1.37
CHD1L-209ENST00000492728 F6X3S4 739 aa23.6■■□□□ 1.37
CHD1L-209ENST00000492728 H7C1D1 291 aa23.6■■□□□ 1.37
CHD1L-209ENST00000492728 CDC5LQ99459 802 aaKnown RBP23.6■■□□□ 1.37
CHD1L-209ENST00000492728 PLA2G12BQ9BX93 195 aa23.6■■□□□ 1.37
CHD1L-209ENST00000492728 MINPP1Q9UNW1 487 aa23.6■■□□□ 1.37
CHD1L-209ENST00000492728 TLL2Q9Y6L7 1015 aa23.6■■□□□ 1.37
CHD1L-209ENST00000492728 ZNF521Q96K83 1311 aa23.59■■□□□ 1.37
CHD1L-209ENST00000492728 PSME4Q14997 1843 aa23.59■■□□□ 1.37
CHD1L-209ENST00000492728 VIL1P09327 827 aaKnown RBP23.59■■□□□ 1.37
CHD1L-209ENST00000492728 RPS12P25398 132 aaKnown RBP23.59■■□□□ 1.37
CHD1L-209ENST00000492728 FAM161AQ3B820 660 aa23.59■■□□□ 1.37
CHD1L-209ENST00000492728 CYP4F22Q6NT55 531 aa23.59■■□□□ 1.37
CHD1L-209ENST00000492728 LINS1Q8NG48 757 aa23.59■■□□□ 1.37
CHD1L-209ENST00000492728 BSDC1Q9NW68 430 aaPredicted RBP23.59■■□□□ 1.37
CHD1L-209ENST00000492728 WBP1LQ9NX94 342 aa23.59■■□□□ 1.37
CHD1L-209ENST00000492728 ZNF646O15015 1829 aaPredicted RBP23.59■■□□□ 1.37
CHD1L-209ENST00000492728 ZNF609O15014 1411 aa23.59■■□□□ 1.37
CHD1L-209ENST00000492728 CACNA1FO60840 1977 aa23.58■■□□□ 1.37
CHD1L-209ENST00000492728 CELF2O95319 508 aaKnown RBP23.58■■□□□ 1.37
CHD1L-209ENST00000492728 TNS4Q8IZW8 715 aa23.58■■□□□ 1.37
CHD1L-209ENST00000492728 ATP2B4P23634 1241 aa23.57■■□□□ 1.36
CHD1L-209ENST00000492728 POTEDQ86YR6 584 aa23.57■■□□□ 1.36
CHD1L-209ENST00000492728 CAPNS2Q96L46 248 aa23.57■■□□□ 1.36
CHD1L-209ENST00000492728 ASTN2O75129 1339 aaPredicted RBP23.57■■□□□ 1.36
CHD1L-209ENST00000492728 MED23Q9ULK4 1368 aa23.56■■□□□ 1.36
CHD1L-209ENST00000492728 BEND3Q5T5X7 828 aa23.56■■□□□ 1.36
CHD1L-209ENST00000492728 RBM26Q5T8P6 1007 aaKnown RBP23.56■■□□□ 1.36
CHD1L-209ENST00000492728 SAPCD2Q86UD0 394 aa23.56■■□□□ 1.36
CHD1L-209ENST00000492728 USP48Q86UV5 1035 aa23.56■■□□□ 1.36
CHD1L-209ENST00000492728 MYH16Q9H6N6 1097 aa23.56■■□□□ 1.36
CHD1L-209ENST00000492728 ZNF408Q9H9D4 720 aa23.56■■□□□ 1.36
CHD1L-209ENST00000492728 CSF1RP07333 972 aa23.55■■□□□ 1.36
CHD1L-209ENST00000492728 ITGA6P23229 1130 aa23.55■■□□□ 1.36
CHD1L-209ENST00000492728 KLRK1P26718 216 aa23.55■■□□□ 1.36
CHD1L-209ENST00000492728 CDC37L1Q7L3B6 337 aa23.55■■□□□ 1.36
CHD1L-209ENST00000492728 TXNRD3Q86VQ6 643 aa23.55■■□□□ 1.36
CHD1L-209ENST00000492728 ADM5C9JUS6 153 aa23.54■■□□□ 1.36
CHD1L-209ENST00000492728 CCT4P50991 539 aaKnown RBP23.54■■□□□ 1.36
CHD1L-209ENST00000492728 GRM1Q13255 1194 aa23.54■■□□□ 1.36
CHD1L-209ENST00000492728 KIF4BQ2VIQ3 1234 aa23.54■■□□□ 1.36
CHD1L-209ENST00000492728 RSBN1LQ6PCB5 846 aaPredicted RBP23.54■■□□□ 1.36
CHD1L-209ENST00000492728 PAXIP1Q6ZW49 1069 aaPredicted RBP23.54■■□□□ 1.36
CHD1L-209ENST00000492728 GMLQ99445 158 aa23.54■■□□□ 1.36
CHD1L-209ENST00000492728 G3V3G9 751 aa23.53■■□□□ 1.36
CHD1L-209ENST00000492728 DCAF8Q5TAQ9 597 aa23.53■■□□□ 1.36
CHD1L-209ENST00000492728 AOC2O75106 756 aa23.52■■□□□ 1.36
CHD1L-209ENST00000492728 ZNF280AP59817 542 aaPredicted RBP23.52■■□□□ 1.36
CHD1L-209ENST00000492728 FOXO4P98177 505 aa23.52■■□□□ 1.36
CHD1L-209ENST00000492728 MXD3Q9BW11 206 aa23.52■■□□□ 1.36
CHD1L-209ENST00000492728 A0A1B0GUL6 1792 aa23.51■■□□□ 1.35
CHD1L-209ENST00000492728 IGHMBP2P38935 993 aaKnown RBP23.51■■□□□ 1.35
CHD1L-209ENST00000492728 EPHA10Q5JZY3 1008 aa23.51■■□□□ 1.35
CHD1L-209ENST00000492728 KRT26Q7Z3Y9 468 aa23.51■■□□□ 1.35
CHD1L-209ENST00000492728 AIDAQ96BJ3 306 aa23.51■■□□□ 1.35
CHD1L-209ENST00000492728 GGA3Q9NZ52 723 aa23.51■■□□□ 1.35
CHD1L-209ENST00000492728 HSPA8P11142 646 aaKnown RBP23.5■■□□□ 1.35
CHD1L-209ENST00000492728 CTCFP49711 727 aaPredicted RBP23.5■■□□□ 1.35
CHD1L-209ENST00000492728 PODNQ7Z5L7 613 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms