RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 ANKRD44Q8N8A2 993 aa9.09□□□□□ -0.95
PDLIM1-204ENST00000492511 ARHGAP45Q92619 1136 aa9.09□□□□□ -0.95
PDLIM1-204ENST00000492511 KLRG1Q96E93 195 aa9.09□□□□□ -0.95
PDLIM1-204ENST00000492511 ZNF594Q96JF6 807 aaPredicted RBP9.09□□□□□ -0.95
PDLIM1-204ENST00000492511 KCNQ5Q9NR82 932 aa9.09□□□□□ -0.95
PDLIM1-204ENST00000492511 ZNRF3Q9ULT6 936 aa9.09□□□□□ -0.95
PDLIM1-204ENST00000492511 CACNA1FO60840 1977 aa9.09□□□□□ -0.95
PDLIM1-204ENST00000492511 CCDC88AQ3V6T2 1871 aa9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 DICER1Q9UPY3 1922 aaKnown RBP9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 POTEIP0CG38 1075 aa9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 POTEJP0CG39 1038 aa9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 EIF6P56537 245 aaKnown RBP9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 DOK7Q18PE1 504 aa9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 WASHC4Q2M389 1173 aa9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 RABL6Q3YEC7 729 aaPredicted RBP9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 GPC2Q8N158 579 aa9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 DNAJC5GQ8N7S2 189 aa9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 API5Q9BZZ5 524 aaKnown RBP9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 BICC1Q9H694 974 aaKnown RBP9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 ANKIB1Q9P2G1 1089 aa9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 GGA1Q9UJY5 639 aa9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 LTBP1Q14766 1721 aa9.08□□□□□ -0.96
PDLIM1-204ENST00000492511 XDHP47989 1333 aa9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 ANKRD18BA2A2Z9 1011 aa9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 SNAP23O00161 211 aa9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 RAD17O75943 681 aa9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 UFL1O94874 794 aa9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 TRIM27P14373 513 aa9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 ATP2B4P23634 1241 aa9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 IGHMBP2P38935 993 aaKnown RBP9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 CCT4P50991 539 aaKnown RBP9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 SCNN1DP51172 638 aa9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 IFIT5Q13325 482 aaKnown RBP9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 INTS3Q68E01 1043 aaKnown RBP9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 SMC1BQ8NDV3 1235 aa9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 TAF1DQ9H5J8 278 aaPredicted RBP9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 DBNDD1Q9H9R9 158 aa9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 CHMP3Q9Y3E7 222 aa9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 GJA3Q9Y6H8 435 aa9.07□□□□□ -0.96
PDLIM1-204ENST00000492511 ECE2O60344 883 aa9.06□□□□□ -0.96
PDLIM1-204ENST00000492511 EPS15P42566 896 aa9.06□□□□□ -0.96
PDLIM1-204ENST00000492511 CHRNDQ07001 517 aa9.06□□□□□ -0.96
PDLIM1-204ENST00000492511 ATF7IPQ6VMQ6 1270 aa9.06□□□□□ -0.96
PDLIM1-204ENST00000492511 TXNRD3Q86VQ6 643 aa9.06□□□□□ -0.96
PDLIM1-204ENST00000492511 TNS4Q8IZW8 715 aa9.06□□□□□ -0.96
PDLIM1-204ENST00000492511 JMYQ8N9B5 988 aa9.06□□□□□ -0.96
PDLIM1-204ENST00000492511 EYA3Q99504 573 aa9.06□□□□□ -0.96
PDLIM1-204ENST00000492511 MPHOSPH8Q99549 860 aa9.06□□□□□ -0.96
PDLIM1-204ENST00000492511 PUS3Q9BZE2 481 aaKnown RBP9.06□□□□□ -0.96
PDLIM1-204ENST00000492511 ZC3H12CQ9C0D7 883 aaKnown RBP9.06□□□□□ -0.96
PDLIM1-204ENST00000492511 KIF16BQ96L93 1317 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 IRS2Q9Y4H2 1338 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 SHTN1A0MZ66 631 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 PSMD14O00487 310 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 TAF5LO75529 589 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 KLRK1P26718 216 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 RFX5P48382 616 aaPredicted RBP9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 GMPSP49915 693 aaPredicted RBP9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 CCDC57Q2TAC2 916 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 CIAPIN1Q6FI81 312 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 LDHAL6AQ6ZMR3 332 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 HELBQ8NG08 1087 aaPredicted RBP9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 FRAT1Q92837 279 aaPredicted RBP9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 MEIS3Q99687 375 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 ANKRD2Q9GZV1 360 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 HACL1Q9UJ83 578 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 LEMD3Q9Y2U8 911 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 RIPOR2Q9Y4F9 1068 aa9.05□□□□□ -0.96
PDLIM1-204ENST00000492511 IQCA1LA6NCM1 817 aa9.04□□□□□ -0.96
PDLIM1-204ENST00000492511 IPO8O15397 1037 aaKnown RBP9.04□□□□□ -0.96
PDLIM1-204ENST00000492511 CAPN15O75808 1086 aa9.04□□□□□ -0.96
PDLIM1-204ENST00000492511 EPHX2P34913 555 aa9.04□□□□□ -0.96
PDLIM1-204ENST00000492511 LRRC24Q50LG9 513 aa9.04□□□□□ -0.96
PDLIM1-204ENST00000492511 KLHDC4Q8TBB5 520 aa9.04□□□□□ -0.96
PDLIM1-204ENST00000492511 CLUAP1Q96AJ1 413 aa9.04□□□□□ -0.96
PDLIM1-204ENST00000492511 GPRC5DQ9NZD1 345 aa9.04□□□□□ -0.96
PDLIM1-204ENST00000492511 ZBTB12Q9Y330 459 aaPredicted RBP9.04□□□□□ -0.96
PDLIM1-204ENST00000492511 ZNF804BA4D1E1 1349 aa9.04□□□□□ -0.96
PDLIM1-204ENST00000492511 MED23Q9ULK4 1368 aa9.03□□□□□ -0.96
PDLIM1-204ENST00000492511 VIL1P09327 827 aaKnown RBP9.03□□□□□ -0.96
PDLIM1-204ENST00000492511 UBTFL1P0CB47 393 aaPredicted RBP9.03□□□□□ -0.96
PDLIM1-204ENST00000492511 RLBP1P12271 317 aa9.03□□□□□ -0.96
PDLIM1-204ENST00000492511 PTPN12Q05209 780 aaKnown RBP9.03□□□□□ -0.96
PDLIM1-204ENST00000492511 TNIP1Q15025 636 aa9.03□□□□□ -0.96
PDLIM1-204ENST00000492511 ZKSCAN2Q63HK3 967 aa9.03□□□□□ -0.96
PDLIM1-204ENST00000492511 C15orf52Q6ZUT6 534 aaKnown RBP9.03□□□□□ -0.96
PDLIM1-204ENST00000492511 TMEM57Q8N5G2 664 aa9.03□□□□□ -0.96
PDLIM1-204ENST00000492511 CNNM1Q9NRU3 951 aa9.03□□□□□ -0.96
PDLIM1-204ENST00000492511 LRRFIP2Q9Y608 721 aaKnown RBP9.03□□□□□ -0.96
PDLIM1-204ENST00000492511 MYH3P11055 1940 aa9.02□□□□□ -0.97
PDLIM1-204ENST00000492511 PLIN1O60240 522 aa9.02□□□□□ -0.97
PDLIM1-204ENST00000492511 ITGBL1O95965 494 aaPredicted RBP9.02□□□□□ -0.97
PDLIM1-204ENST00000492511 HIRAP54198 1017 aaPredicted RBP9.02□□□□□ -0.97
PDLIM1-204ENST00000492511 EAPPQ56P03 285 aaPredicted RBP9.02□□□□□ -0.97
PDLIM1-204ENST00000492511 TAF7LQ5H9L4 462 aa9.02□□□□□ -0.97
PDLIM1-204ENST00000492511 COL13A1Q5TAT6 717 aaPredicted RBP9.02□□□□□ -0.97
PDLIM1-204ENST00000492511 CHADLQ6NUI6 762 aa9.02□□□□□ -0.97
PDLIM1-204ENST00000492511 PODNQ7Z5L7 613 aa9.02□□□□□ -0.97
PDLIM1-204ENST00000492511 LDHDQ86WU2 507 aa9.02□□□□□ -0.97
PDLIM1-204ENST00000492511 VGLL2Q8N8G2 317 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms