RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 PDE6BP35913 854 aa16.82■□□□□ 0.28
PTPRE-210ENST00000492479 RPS8P62241 208 aaKnown RBP16.82■□□□□ 0.28
PTPRE-210ENST00000492479 GRAPQ13588 217 aa16.82■□□□□ 0.28
PTPRE-210ENST00000492479 MSL1Q68DK7 614 aa16.82■□□□□ 0.28
PTPRE-210ENST00000492479 ILDR2Q71H61 639 aa16.82■□□□□ 0.28
PTPRE-210ENST00000492479 DDX46Q7L014 1031 aaKnown RBP16.82■□□□□ 0.28
PTPRE-210ENST00000492479 GRAPLQ8TC17 118 aaPredicted RBP16.82■□□□□ 0.28
PTPRE-210ENST00000492479 AKAP2Q9Y2D5 859 aa16.82■□□□□ 0.28
PTPRE-210ENST00000492479 ZBTB22O15209 634 aa16.81■□□□□ 0.28
PTPRE-210ENST00000492479 PDE8BO95263 885 aa16.81■□□□□ 0.28
PTPRE-210ENST00000492479 FGFR2P21802 821 aa16.81■□□□□ 0.28
PTPRE-210ENST00000492479 TMC4Q7Z404 712 aa16.81■□□□□ 0.28
PTPRE-210ENST00000492479 CELF1Q92879 486 aaKnown RBP16.81■□□□□ 0.28
PTPRE-210ENST00000492479 MPHOSPH8Q99549 860 aa16.81■□□□□ 0.28
PTPRE-210ENST00000492479 CNNM1Q9NRU3 951 aa16.81■□□□□ 0.28
PTPRE-210ENST00000492479 LTBP1Q14766 1721 aa16.8■□□□□ 0.28
PTPRE-210ENST00000492479 SRGNP10124 158 aa16.8■□□□□ 0.28
PTPRE-210ENST00000492479 TTC22Q5TAA0 569 aa16.8■□□□□ 0.28
PTPRE-210ENST00000492479 AACSQ86V21 672 aa16.8■□□□□ 0.28
PTPRE-210ENST00000492479 CCDC24Q8N4L8 307 aa16.8■□□□□ 0.28
PTPRE-210ENST00000492479 RBM17Q96I25 401 aaKnown RBP16.8■□□□□ 0.28
PTPRE-210ENST00000492479 BBOX1O75936 387 aa16.79■□□□□ 0.28
PTPRE-210ENST00000492479 IFIT2P09913 472 aaKnown RBP16.79■□□□□ 0.28
PTPRE-210ENST00000492479 NPR1P16066 1061 aa16.79■□□□□ 0.28
PTPRE-210ENST00000492479 METTL24Q5JXM2 366 aa16.79■□□□□ 0.28
PTPRE-210ENST00000492479 PI4K2BQ8TCG2 481 aa16.79■□□□□ 0.28
PTPRE-210ENST00000492479 RPGRQ92834 1020 aaKnown RBP16.79■□□□□ 0.28
PTPRE-210ENST00000492479 SGIP1Q9BQI5 828 aa16.79■□□□□ 0.28
PTPRE-210ENST00000492479 ECHDC1Q9NTX5 307 aa16.79■□□□□ 0.28
PTPRE-210ENST00000492479 DBNLQ9UJU6 430 aaKnown RBP16.79■□□□□ 0.28
PTPRE-210ENST00000492479 KIAA1551Q9HCM1 1747 aa16.79■□□□□ 0.28
PTPRE-210ENST00000492479 PUM3Q15397 648 aaKnown RBP16.78■□□□□ 0.28
PTPRE-210ENST00000492479 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.78■□□□□ 0.28
PTPRE-210ENST00000492479 GPATCH3Q96I76 525 aa16.78■□□□□ 0.28
PTPRE-210ENST00000492479 MINPP1Q9UNW1 487 aa16.78■□□□□ 0.28
PTPRE-210ENST00000492479 A0A1B0GUL7 405 aa16.77■□□□□ 0.28
PTPRE-210ENST00000492479 ERC2O15083 957 aa16.77■□□□□ 0.28
PTPRE-210ENST00000492479 GLRX3O76003 335 aaKnown RBP16.77■□□□□ 0.28
PTPRE-210ENST00000492479 GSPT1P15170 499 aaKnown RBP16.77■□□□□ 0.28
PTPRE-210ENST00000492479 CHRNDQ07001 517 aa16.77■□□□□ 0.28
PTPRE-210ENST00000492479 R3HDM1Q15032 1099 aaKnown RBP16.77■□□□□ 0.28
PTPRE-210ENST00000492479 STYK1Q6J9G0 422 aa16.77■□□□□ 0.28
PTPRE-210ENST00000492479 LPIN2Q92539 896 aa16.77■□□□□ 0.28
PTPRE-210ENST00000492479 MASTLQ96GX5 879 aa16.77■□□□□ 0.28
PTPRE-210ENST00000492479 ZNF512BQ96KM6 892 aaPredicted RBP16.77■□□□□ 0.28
PTPRE-210ENST00000492479 ANKRD2Q9GZV1 360 aa16.77■□□□□ 0.28
PTPRE-210ENST00000492479 ATP5JP18859 108 aa16.76■□□□□ 0.27
PTPRE-210ENST00000492479 UBE4AQ14139 1066 aa16.76■□□□□ 0.27
PTPRE-210ENST00000492479 ATP2B3Q16720 1220 aa16.76■□□□□ 0.27
PTPRE-210ENST00000492479 TICAM2Q86XR7 235 aa16.76■□□□□ 0.27
PTPRE-210ENST00000492479 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
PTPRE-210ENST00000492479 ALDH1B1P30837 517 aa16.75■□□□□ 0.27
PTPRE-210ENST00000492479 CCDC8Q9H0W5 538 aaPredicted RBP16.75■□□□□ 0.27
PTPRE-210ENST00000492479 AK9Q5TCS8 1911 aa16.74■□□□□ 0.27
PTPRE-210ENST00000492479 AKAP11Q9UKA4 1901 aa16.74■□□□□ 0.27
PTPRE-210ENST00000492479 C15orf52Q6ZUT6 534 aaKnown RBP16.74■□□□□ 0.27
PTPRE-210ENST00000492479 DBNDD2Q9BQY9 259 aa16.74■□□□□ 0.27
PTPRE-210ENST00000492479 PODXL2Q9NZ53 605 aa16.74■□□□□ 0.27
PTPRE-210ENST00000492479 BRCA1P38398 1863 aaKnown RBP16.73■□□□□ 0.27
PTPRE-210ENST00000492479 IRS2Q9Y4H2 1338 aa16.73■□□□□ 0.27
PTPRE-210ENST00000492479 POLD1P28340 1107 aa16.73■□□□□ 0.27
PTPRE-210ENST00000492479 TIMM10P62072 90 aa16.73■□□□□ 0.27
PTPRE-210ENST00000492479 C8orf34Q49A92 452 aa16.73■□□□□ 0.27
PTPRE-210ENST00000492479 SP8Q8IXZ3 490 aa16.73■□□□□ 0.27
PTPRE-210ENST00000492479 XAGE2Q96GT9 111 aa16.73■□□□□ 0.27
PTPRE-210ENST00000492479 ZNF804BA4D1E1 1349 aa16.72■□□□□ 0.27
PTPRE-210ENST00000492479 H0YIN7 160 aa16.72■□□□□ 0.27
PTPRE-210ENST00000492479 ZBTB7AO95365 584 aa16.72■□□□□ 0.27
PTPRE-210ENST00000492479 SLC5A1P13866 664 aa16.72■□□□□ 0.27
PTPRE-210ENST00000492479 PTGER2P43116 358 aa16.72■□□□□ 0.27
PTPRE-210ENST00000492479 C2CD5Q86YS7 1000 aa16.72■□□□□ 0.27
PTPRE-210ENST00000492479 LEMD3Q9Y2U8 911 aa16.72■□□□□ 0.27
PTPRE-210ENST00000492479 ATP6V0A2Q9Y487 856 aa16.72■□□□□ 0.27
PTPRE-210ENST00000492479 RFX7Q2KHR2 1363 aa16.72■□□□□ 0.27
PTPRE-210ENST00000492479 XDHP47989 1333 aa16.71■□□□□ 0.27
PTPRE-210ENST00000492479 SNED1Q8TER0 1413 aa16.71■□□□□ 0.27
PTPRE-210ENST00000492479 SLX4Q8IY92 1834 aa16.71■□□□□ 0.27
PTPRE-210ENST00000492479 IFIT1P09914 478 aaKnown RBP16.71■□□□□ 0.27
PTPRE-210ENST00000492479 SDSP20132 328 aa16.71■□□□□ 0.27
PTPRE-210ENST00000492479 ARID4AP29374 1257 aaPredicted RBP16.71■□□□□ 0.27
PTPRE-210ENST00000492479 CNKSR1Q969H4 720 aa16.71■□□□□ 0.27
PTPRE-210ENST00000492479 BACH2Q9BYV9 841 aa16.71■□□□□ 0.27
PTPRE-210ENST00000492479 DUOX1Q9NRD9 1551 aa16.7■□□□□ 0.26
PTPRE-210ENST00000492479 PPEF1O14829 653 aaPredicted RBP16.7■□□□□ 0.26
PTPRE-210ENST00000492479 ADORA1P30542 326 aa16.7■□□□□ 0.26
PTPRE-210ENST00000492479 TGFB2P61812 414 aa16.7■□□□□ 0.26
PTPRE-210ENST00000492479 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
PTPRE-210ENST00000492479 NEUROD6Q96NK8 337 aa16.7■□□□□ 0.26
PTPRE-210ENST00000492479 HAUS7Q99871 368 aa16.7■□□□□ 0.26
PTPRE-210ENST00000492479 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
PTPRE-210ENST00000492479 TAF5LO75529 589 aa16.69■□□□□ 0.26
PTPRE-210ENST00000492479 CCDC158Q5M9N0 1113 aa16.69■□□□□ 0.26
PTPRE-210ENST00000492479 HELBQ8NG08 1087 aaPredicted RBP16.69■□□□□ 0.26
PTPRE-210ENST00000492479 C7orf43Q8WVR3 580 aa16.69■□□□□ 0.26
PTPRE-210ENST00000492479 CD2APQ9Y5K6 639 aa16.69■□□□□ 0.26
PTPRE-210ENST00000492479 PDS5AQ29RF7 1337 aaKnown RBP16.69■□□□□ 0.26
PTPRE-210ENST00000492479 CDC45O75419 566 aa16.68■□□□□ 0.26
PTPRE-210ENST00000492479 UQCRFS1P1P0C7P4 283 aa16.68■□□□□ 0.26
PTPRE-210ENST00000492479 ATP2B4P23634 1241 aa16.68■□□□□ 0.26
PTPRE-210ENST00000492479 GRIPAP1Q4V328 841 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms