RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 CHMP3Q9Y3E7 222 aa11.24□□□□□ -0.61
VPS8-225ENST00000492449 PPLO60437 1756 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 GOLGA6L9A6NEM1 432 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 TMCO5BA8MYB1 307 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 NFE2L2Q16236 605 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 CDC37L1Q7L3B6 337 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 CNNM3Q8NE01 707 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 LSG1Q9H089 658 aaKnown RBP11.23□□□□□ -0.61
VPS8-225ENST00000492449 EPC1Q9H2F5 836 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 MCM8Q9UJA3 840 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 GPTP24298 496 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 NEDD9Q14511 834 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 PPP2R5AQ15172 486 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 ZKSCAN8Q15776 578 aaPredicted RBP11.23□□□□□ -0.61
VPS8-225ENST00000492449 PLEKHO1Q53GL0 409 aaPredicted RBP11.23□□□□□ -0.61
VPS8-225ENST00000492449 TTLL5Q6EMB2 1281 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 CWC27Q6UX04 472 aaKnown RBP11.23□□□□□ -0.61
VPS8-225ENST00000492449 DDX11Q96FC9 970 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 IL25Q9H293 177 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 ADGRF5Q8IZF2 1346 aa11.23□□□□□ -0.61
VPS8-225ENST00000492449 ZSCAN12O43309 604 aa11.22□□□□□ -0.61
VPS8-225ENST00000492449 DIAPH1O60610 1272 aaKnown RBP11.22□□□□□ -0.61
VPS8-225ENST00000492449 SHOX2O60902 331 aaPredicted RBP11.22□□□□□ -0.61
VPS8-225ENST00000492449 LARP1BQ659C4 914 aaKnown RBP11.22□□□□□ -0.61
VPS8-225ENST00000492449 NAT10Q9H0A0 1025 aaKnown RBP11.22□□□□□ -0.61
VPS8-225ENST00000492449 EXOC5O00471 708 aa11.22□□□□□ -0.61
VPS8-225ENST00000492449 ERLIN1O75477 346 aa11.22□□□□□ -0.61
VPS8-225ENST00000492449 ELF1P32519 619 aa11.22□□□□□ -0.61
VPS8-225ENST00000492449 NBPF9Q3BBW0 867 aa11.22□□□□□ -0.61
VPS8-225ENST00000492449 GBP6Q6ZN66 633 aa11.22□□□□□ -0.61
VPS8-225ENST00000492449 CEP57L1Q8IYX8 460 aa11.22□□□□□ -0.61
VPS8-225ENST00000492449 SYTL4Q96C24 671 aaPredicted RBP11.22□□□□□ -0.61
VPS8-225ENST00000492449 ARHGAP5Q13017 1502 aa11.22□□□□□ -0.61
VPS8-225ENST00000492449 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.22□□□□□ -0.61
VPS8-225ENST00000492449 VWA3AA6NCI4 1184 aa11.22□□□□□ -0.61
VPS8-225ENST00000492449 SCP2P22307 547 aa11.22□□□□□ -0.61
VPS8-225ENST00000492449 SETQ01105 290 aaPredicted RBP11.22□□□□□ -0.61
VPS8-225ENST00000492449 RASEFQ8IZ41 740 aa11.22□□□□□ -0.61
VPS8-225ENST00000492449 KIFC2Q96AC6 838 aa11.22□□□□□ -0.61
VPS8-225ENST00000492449 CD163L1Q9NR16 1453 aa11.21□□□□□ -0.61
VPS8-225ENST00000492449 EVC2Q86UK5 1308 aa11.21□□□□□ -0.61
VPS8-225ENST00000492449 APBB1O00213 710 aa11.21□□□□□ -0.61
VPS8-225ENST00000492449 C8orf58Q8NAV2 365 aa11.21□□□□□ -0.61
VPS8-225ENST00000492449 GIMAP7Q8NHV1 300 aa11.21□□□□□ -0.61
VPS8-225ENST00000492449 BICD2Q8TD16 824 aa11.21□□□□□ -0.61
VPS8-225ENST00000492449 RILPL2Q969X0 211 aa11.21□□□□□ -0.61
VPS8-225ENST00000492449 LRRCC1Q9C099 1032 aa11.21□□□□□ -0.61
VPS8-225ENST00000492449 BICC1Q9H694 974 aaKnown RBP11.21□□□□□ -0.61
VPS8-225ENST00000492449 ZSWIM6Q9HCJ5 1215 aa11.21□□□□□ -0.61
VPS8-225ENST00000492449 SH3BP1Q9Y3L3 701 aa11.21□□□□□ -0.61
VPS8-225ENST00000492449 UGGT1Q9NYU2 1555 aa11.21□□□□□ -0.61
VPS8-225ENST00000492449 AARSP49588 968 aaKnown RBP eCLIP11.21□□□□□ -0.623e-6■■■■■ 61.8
VPS8-225ENST00000492449 XAGE2Q96GT9 111 aa11.21□□□□□ -0.62
VPS8-225ENST00000492449 ANKZF1Q9H8Y5 726 aa11.21□□□□□ -0.62
VPS8-225ENST00000492449 VIPAS39Q9H9C1 493 aa11.21□□□□□ -0.62
VPS8-225ENST00000492449 STK26Q9P289 416 aa11.21□□□□□ -0.62
VPS8-225ENST00000492449 STAG3Q9UJ98 1225 aa11.21□□□□□ -0.62
VPS8-225ENST00000492449 N4BP1O75113 896 aaKnown RBP11.2□□□□□ -0.62
VPS8-225ENST00000492449 TUBBP07437 444 aa11.2□□□□□ -0.62
VPS8-225ENST00000492449 GCFC2P16383 781 aaKnown RBP11.2□□□□□ -0.62
VPS8-225ENST00000492449 INHBEP58166 350 aa11.2□□□□□ -0.62
VPS8-225ENST00000492449 TMC6Q7Z403 805 aa11.2□□□□□ -0.62
VPS8-225ENST00000492449 FMNL3Q8IVF7 1028 aa11.2□□□□□ -0.62
VPS8-225ENST00000492449 TEX11Q8IYF3 940 aa11.2□□□□□ -0.62
VPS8-225ENST00000492449 MEIS3Q99687 375 aa11.2□□□□□ -0.62
VPS8-225ENST00000492449 ACBD3Q9H3P7 528 aa11.2□□□□□ -0.62
VPS8-225ENST00000492449 ANKRD65E5RJM6 399 aa11.2□□□□□ -0.62
VPS8-225ENST00000492449 MRPL12P52815 198 aaKnown RBP11.2□□□□□ -0.62
VPS8-225ENST00000492449 SCRN1Q12765 414 aa11.2□□□□□ -0.62
VPS8-225ENST00000492449 GNL2Q13823 731 aaKnown RBP11.2□□□□□ -0.62
VPS8-225ENST00000492449 CRYMQ14894 314 aa11.2□□□□□ -0.62
VPS8-225ENST00000492449 PREPLQ4J6C6 727 aaPredicted RBP11.2□□□□□ -0.62
VPS8-225ENST00000492449 UNC5CLQ8IV45 518 aa11.2□□□□□ -0.62
VPS8-225ENST00000492449 AOPEPQ8N6M6 819 aa11.2□□□□□ -0.62
VPS8-225ENST00000492449 XPO4Q9C0E2 1151 aaKnown RBP11.2□□□□□ -0.62
VPS8-225ENST00000492449 ADGRB3O60242 1522 aa11.2□□□□□ -0.62
VPS8-225ENST00000492449 HSP90B2PQ58FF3 399 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 CABS1Q96KC9 395 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 GBP3Q9H0R5 595 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 SSR1P43307 286 aaKnown RBP11.19□□□□□ -0.62
VPS8-225ENST00000492449 MCM6Q14566 821 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 ME3Q16798 604 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 KRT24Q2M2I5 525 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 WLSQ5T9L3 541 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 SRGAP1Q7Z6B7 1085 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 FAM204AQ9H8W3 233 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 CLTCQ00610 1675 aaKnown RBP11.19□□□□□ -0.62
VPS8-225ENST00000492449 PRPF6O94906 941 aaKnown RBP11.19□□□□□ -0.62
VPS8-225ENST00000492449 IFIT2P09913 472 aaKnown RBP11.19□□□□□ -0.62
VPS8-225ENST00000492449 TUBB2AQ13885 445 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 CPLX2Q6PUV4 134 aaKnown RBP11.19□□□□□ -0.62
VPS8-225ENST00000492449 AMOTL1Q8IY63 956 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 TUBB2BQ9BVA1 445 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 ALDH8A1Q9H2A2 487 aaPredicted RBP11.19□□□□□ -0.62
VPS8-225ENST00000492449 VEZTQ9HBM0 779 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 RIMS2Q9UQ26 1411 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 ERCC6L2Q5T890 1561 aa11.19□□□□□ -0.62
VPS8-225ENST00000492449 ABCC6O95255 1503 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 SEMA3FQ13275 785 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 BIRC2Q13490 618 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms