RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 PROX2Q3B8N5 592 aa13.16□□□□□ -0.3
EPHB4-208ENST00000492403 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
EPHB4-208ENST00000492403 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.16□□□□□ -0.3
EPHB4-208ENST00000492403 ZNF526Q8TF50 670 aaPredicted RBP13.16□□□□□ -0.3
EPHB4-208ENST00000492403 SCN11AQ9UI33 1791 aa13.15□□□□□ -0.3
EPHB4-208ENST00000492403 RNMTO43148 476 aaKnown RBP13.15□□□□□ -0.3
EPHB4-208ENST00000492403 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
EPHB4-208ENST00000492403 SWT1Q5T5J6 900 aaKnown RBP13.15□□□□□ -0.3
EPHB4-208ENST00000492403 GAS2L2Q8NHY3 880 aa13.15□□□□□ -0.3
EPHB4-208ENST00000492403 RCAN3Q9UKA8 241 aa13.15□□□□□ -0.3
EPHB4-208ENST00000492403 RNF123Q5XPI4 1314 aa13.14□□□□□ -0.31
EPHB4-208ENST00000492403 COL5A3P25940 1745 aaPredicted RBP13.14□□□□□ -0.31
EPHB4-208ENST00000492403 STARD3NLO95772 234 aa13.14□□□□□ -0.31
EPHB4-208ENST00000492403 GYS1P13807 737 aa13.14□□□□□ -0.31
EPHB4-208ENST00000492403 TMEM164Q5U3C3 297 aa13.14□□□□□ -0.31
EPHB4-208ENST00000492403 ARHGAP27Q6ZUM4 889 aa13.14□□□□□ -0.31
EPHB4-208ENST00000492403 SLC4A9Q96Q91 983 aa13.14□□□□□ -0.31
EPHB4-208ENST00000492403 LGR6Q9HBX8 967 aa13.14□□□□□ -0.31
EPHB4-208ENST00000492403 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
EPHB4-208ENST00000492403 A0A0G2JLW4 131 aa13.13□□□□□ -0.31
EPHB4-208ENST00000492403 UNCXA6NJT0 531 aa13.13□□□□□ -0.31
EPHB4-208ENST00000492403 GNAT3A8MTJ3 354 aa13.13□□□□□ -0.31
EPHB4-208ENST00000492403 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
EPHB4-208ENST00000492403 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
EPHB4-208ENST00000492403 NPHP1O15259 732 aa13.12□□□□□ -0.31
EPHB4-208ENST00000492403 SLC39A6Q13433 755 aa13.12□□□□□ -0.31
EPHB4-208ENST00000492403 DNAJC10Q8IXB1 793 aa13.12□□□□□ -0.31
EPHB4-208ENST00000492403 STK32AQ8WU08 396 aa13.12□□□□□ -0.31
EPHB4-208ENST00000492403 RTF1Q92541 710 aaKnown RBP13.12□□□□□ -0.31
EPHB4-208ENST00000492403 PIM2Q9P1W9 311 aa13.12□□□□□ -0.31
EPHB4-208ENST00000492403 ZMIZ1Q9ULJ6 1067 aa13.12□□□□□ -0.31
EPHB4-208ENST00000492403 C4AP0C0L4 1744 aa13.11□□□□□ -0.31
EPHB4-208ENST00000492403 RBM47A0AV96 593 aaKnown RBP13.11□□□□□ -0.31
EPHB4-208ENST00000492403 FUT2Q10981 343 aa13.11□□□□□ -0.31
EPHB4-208ENST00000492403 NR1H3Q13133 447 aa13.11□□□□□ -0.31
EPHB4-208ENST00000492403 SYMPKQ92797 1274 aaKnown RBP13.11□□□□□ -0.31
EPHB4-208ENST00000492403 TEX13AQ9BXU3 409 aaPredicted RBP13.11□□□□□ -0.31
EPHB4-208ENST00000492403 SRP68Q9UHB9 627 aaKnown RBP13.11□□□□□ -0.31
EPHB4-208ENST00000492403 NOVA2Q9UNW9 492 aaKnown RBP13.11□□□□□ -0.31
EPHB4-208ENST00000492403 USP42Q9H9J4 1324 aaKnown RBP13.11□□□□□ -0.31
EPHB4-208ENST00000492403 A0A087WZG4 1122 aa13.1□□□□□ -0.31
EPHB4-208ENST00000492403 CANXP27824 592 aaKnown RBP13.1□□□□□ -0.31
EPHB4-208ENST00000492403 USPL1Q5W0Q7 1092 aa13.1□□□□□ -0.31
EPHB4-208ENST00000492403 RUNDC1Q96C34 613 aa13.1□□□□□ -0.31
EPHB4-208ENST00000492403 KIAA1468Q9P260 1216 aa13.1□□□□□ -0.31
EPHB4-208ENST00000492403 VIRMAQ69YN4 1812 aaKnown RBP13.1□□□□□ -0.31
EPHB4-208ENST00000492403 N4BP2Q86UW6 1770 aaPredicted RBP13.09□□□□□ -0.31
EPHB4-208ENST00000492403 U2AF1L5P0DN76 240 aaPredicted RBP13.09□□□□□ -0.31
EPHB4-208ENST00000492403 DPEP1P16444 411 aa13.09□□□□□ -0.31
EPHB4-208ENST00000492403 SLC4A3P48751 1232 aa13.09□□□□□ -0.31
EPHB4-208ENST00000492403 U2AF1Q01081 240 aaKnown RBP eCLIP13.09□□□□□ -0.31
EPHB4-208ENST00000492403 DALRD3Q5D0E6 543 aaKnown RBP13.09□□□□□ -0.31
EPHB4-208ENST00000492403 C16orf71Q8IYS4 520 aaPredicted RBP13.09□□□□□ -0.31
EPHB4-208ENST00000492403 SALL2Q9Y467 1007 aaPredicted RBP13.09□□□□□ -0.31
EPHB4-208ENST00000492403 PIK3CDO00329 1044 aa13.08□□□□□ -0.32
EPHB4-208ENST00000492403 CYP19A1P11511 503 aaPredicted RBP13.08□□□□□ -0.32
EPHB4-208ENST00000492403 RRP1P56182 461 aaKnown RBP13.08□□□□□ -0.32
EPHB4-208ENST00000492403 INTS5Q6P9B9 1019 aaKnown RBP13.08□□□□□ -0.32
EPHB4-208ENST00000492403 PXDNLA1KZ92 1463 aa13.08□□□□□ -0.32
EPHB4-208ENST00000492403 TJP1Q07157 1748 aa13.08□□□□□ -0.32
EPHB4-208ENST00000492403 COL15A1P39059 1388 aa13.07□□□□□ -0.32
EPHB4-208ENST00000492403 C10orf71Q711Q0 1435 aa13.07□□□□□ -0.32
EPHB4-208ENST00000492403 USP17L3A6NCW0 530 aa13.07□□□□□ -0.32
EPHB4-208ENST00000492403 USP17L4A6NCW7 530 aa13.07□□□□□ -0.32
EPHB4-208ENST00000492403 PRKAR2BP31323 418 aa13.07□□□□□ -0.32
EPHB4-208ENST00000492403 USP17L2Q6R6M4 530 aa13.07□□□□□ -0.32
EPHB4-208ENST00000492403 USP17L1Q7RTZ2 530 aa13.07□□□□□ -0.32
EPHB4-208ENST00000492403 CCDC136Q96JN2 1154 aa13.07□□□□□ -0.32
EPHB4-208ENST00000492403 FMNL2Q96PY5 1086 aa13.07□□□□□ -0.32
EPHB4-208ENST00000492403 KCNK17Q96T54 332 aa13.07□□□□□ -0.32
EPHB4-208ENST00000492403 NARFQ9UHQ1 456 aa13.07□□□□□ -0.32
EPHB4-208ENST00000492403 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
EPHB4-208ENST00000492403 BTBD11A6QL63 1104 aa13.06□□□□□ -0.32
EPHB4-208ENST00000492403 ARID4AP29374 1257 aaPredicted RBP13.06□□□□□ -0.32
EPHB4-208ENST00000492403 ZNF790Q6PG37 636 aa13.06□□□□□ -0.32
EPHB4-208ENST00000492403 BICDL1Q6ZP65 573 aa13.06□□□□□ -0.32
EPHB4-208ENST00000492403 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
EPHB4-208ENST00000492403 MYH14Q7Z406 1995 aaKnown RBP13.06□□□□□ -0.32
EPHB4-208ENST00000492403 SOS1Q07889 1333 aaPredicted RBP13.06□□□□□ -0.32
EPHB4-208ENST00000492403 MRC1P22897 1456 aa13.05□□□□□ -0.32
EPHB4-208ENST00000492403 APAF1O14727 1248 aa13.05□□□□□ -0.32
EPHB4-208ENST00000492403 SKIP12755 728 aa13.05□□□□□ -0.32
EPHB4-208ENST00000492403 ERCC3P19447 782 aa13.05□□□□□ -0.32
EPHB4-208ENST00000492403 PHLDB3Q6NSJ2 640 aa13.05□□□□□ -0.32
EPHB4-208ENST00000492403 ZBTB1Q9Y2K1 713 aa13.05□□□□□ -0.32
EPHB4-208ENST00000492403 USP17L5A8MUK1 530 aa13.04□□□□□ -0.32
EPHB4-208ENST00000492403 H0YIN7 160 aa13.04□□□□□ -0.32
EPHB4-208ENST00000492403 POLRMTO00411 1230 aaKnown RBP13.04□□□□□ -0.32
EPHB4-208ENST00000492403 SERPINB2P05120 415 aa13.04□□□□□ -0.32
EPHB4-208ENST00000492403 CFHP08603 1231 aa13.04□□□□□ -0.32
EPHB4-208ENST00000492403 FBXO45P0C2W1 286 aa13.04□□□□□ -0.32
EPHB4-208ENST00000492403 IRX6P78412 446 aaPredicted RBP13.04□□□□□ -0.32
EPHB4-208ENST00000492403 RETREG3Q86VR2 466 aa13.04□□□□□ -0.32
EPHB4-208ENST00000492403 ZBBXA8MT70 800 aa13.03□□□□□ -0.32
EPHB4-208ENST00000492403 TM4SF1P30408 202 aa13.03□□□□□ -0.32
EPHB4-208ENST00000492403 CHRNA5P30532 468 aa13.03□□□□□ -0.32
EPHB4-208ENST00000492403 DDR1Q08345 913 aa13.03□□□□□ -0.32
EPHB4-208ENST00000492403 SLFN5Q08AF3 891 aa13.03□□□□□ -0.32
EPHB4-208ENST00000492403 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
EPHB4-208ENST00000492403 ZNF496Q96IT1 587 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms