RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 EYA3Q99504 573 aa16.28■□□□□ 0.2
TREX1-204ENST00000492235 DBF4Q9UBU7 674 aaPredicted RBP16.28■□□□□ 0.2
TREX1-204ENST00000492235 TRIM35Q9UPQ4 493 aa16.28■□□□□ 0.2
TREX1-204ENST00000492235 IRS4O14654 1257 aaPredicted RBP16.27■□□□□ 0.2
TREX1-204ENST00000492235 TBC1D16Q8TBP0 767 aa16.27■□□□□ 0.2
TREX1-204ENST00000492235 SCN9AQ15858 1988 aa16.27■□□□□ 0.19
TREX1-204ENST00000492235 ZNF157P51786 506 aaPredicted RBP16.26■□□□□ 0.19
TREX1-204ENST00000492235 RPS8P62241 208 aaKnown RBP16.26■□□□□ 0.19
TREX1-204ENST00000492235 KIF23Q02241 960 aaPredicted RBP16.26■□□□□ 0.19
TREX1-204ENST00000492235 KIF4BQ2VIQ3 1234 aa16.26■□□□□ 0.19
TREX1-204ENST00000492235 CCDC102AQ96A19 550 aa16.26■□□□□ 0.19
TREX1-204ENST00000492235 ASTN2O75129 1339 aaPredicted RBP16.25■□□□□ 0.19
TREX1-204ENST00000492235 HOXB7P09629 217 aa16.25■□□□□ 0.19
TREX1-204ENST00000492235 ZC3H12CQ9C0D7 883 aaKnown RBP16.25■□□□□ 0.19
TREX1-204ENST00000492235 HYPKQ9NX55 129 aa16.25■□□□□ 0.19
TREX1-204ENST00000492235 GGA3Q9NZ52 723 aa16.25■□□□□ 0.19
TREX1-204ENST00000492235 AKAP11Q9UKA4 1901 aa16.25■□□□□ 0.19
TREX1-204ENST00000492235 G3V3G9 751 aa16.24■□□□□ 0.19
TREX1-204ENST00000492235 TRPA1O75762 1119 aa16.24■□□□□ 0.19
TREX1-204ENST00000492235 UFL1O94874 794 aa16.24■□□□□ 0.19
TREX1-204ENST00000492235 VIL1P09327 827 aaKnown RBP16.24■□□□□ 0.19
TREX1-204ENST00000492235 DCAF8Q5TAQ9 597 aa16.24■□□□□ 0.19
TREX1-204ENST00000492235 DUSP27Q5VZP5 1158 aa16.24■□□□□ 0.19
TREX1-204ENST00000492235 SULF1Q8IWU6 871 aa16.24■□□□□ 0.19
TREX1-204ENST00000492235 RUNDC1Q96C34 613 aa16.24■□□□□ 0.19
TREX1-204ENST00000492235 SEC31BQ9NQW1 1179 aa16.24■□□□□ 0.19
TREX1-204ENST00000492235 SAGE1Q9NXZ1 904 aa16.24■□□□□ 0.19
TREX1-204ENST00000492235 TRIM28Q13263 835 aaKnown RBP16.23■□□□□ 0.19
TREX1-204ENST00000492235 RIC3Q7Z5B4 369 aa16.23■□□□□ 0.19
TREX1-204ENST00000492235 RNF186Q9NXI6 227 aa16.23■□□□□ 0.19
TREX1-204ENST00000492235 PODXL2Q9NZ53 605 aa16.23■□□□□ 0.19
TREX1-204ENST00000492235 ANKIB1Q9P2G1 1089 aa16.23■□□□□ 0.19
TREX1-204ENST00000492235 SLC10A3P09131 477 aa16.22■□□□□ 0.19
TREX1-204ENST00000492235 WDR43Q15061 677 aaKnown RBP eCLIP16.22■□□□□ 0.19
TREX1-204ENST00000492235 ZBTB38Q8NAP3 1195 aaPredicted RBP16.22■□□□□ 0.19
TREX1-204ENST00000492235 CDCA5Q96FF9 252 aa16.22■□□□□ 0.19
TREX1-204ENST00000492235 GGA1Q9UJY5 639 aa16.22■□□□□ 0.19
TREX1-204ENST00000492235 MYBBP1AQ9BQG0 1328 aaKnown RBP16.21■□□□□ 0.19
TREX1-204ENST00000492235 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
TREX1-204ENST00000492235 SCARF1Q14162 830 aa16.21■□□□□ 0.19
TREX1-204ENST00000492235 ANGEL2Q5VTE6 544 aaKnown RBP16.21■□□□□ 0.19
TREX1-204ENST00000492235 CCDC85AQ96PX6 553 aaPredicted RBP16.21■□□□□ 0.19
TREX1-204ENST00000492235 CSRNP1Q96S65 589 aa16.21■□□□□ 0.19
TREX1-204ENST00000492235 MYD88Q99836 296 aa16.21■□□□□ 0.19
TREX1-204ENST00000492235 MBIPQ9NS73 344 aa16.21■□□□□ 0.19
TREX1-204ENST00000492235 TNRC18O15417 2968 aaPredicted RBP16.2■□□□□ 0.18
TREX1-204ENST00000492235 PSME4Q14997 1843 aa16.2■□□□□ 0.18
TREX1-204ENST00000492235 SOX10P56693 466 aa16.2■□□□□ 0.18
TREX1-204ENST00000492235 RSBN1LQ6PCB5 846 aaPredicted RBP16.2■□□□□ 0.18
TREX1-204ENST00000492235 JARID2Q92833 1246 aaPredicted RBP16.2■□□□□ 0.18
TREX1-204ENST00000492235 PHAXQ9H814 394 aaKnown RBP16.2■□□□□ 0.18
TREX1-204ENST00000492235 HSP90B1P14625 803 aaKnown RBP16.19■□□□□ 0.18
TREX1-204ENST00000492235 ZNF280AP59817 542 aaPredicted RBP16.19■□□□□ 0.18
TREX1-204ENST00000492235 CCDC152Q4G0S7 254 aa16.19■□□□□ 0.18
TREX1-204ENST00000492235 RASAL3Q86YV0 1011 aa16.19■□□□□ 0.18
TREX1-204ENST00000492235 AGBL3Q8NEM8 1001 aa16.19■□□□□ 0.18
TREX1-204ENST00000492235 ADAMTS8Q9UP79 889 aa16.19■□□□□ 0.18
TREX1-204ENST00000492235 PDE4DIPQ5VU43 2346 aa16.19■□□□□ 0.18
TREX1-204ENST00000492235 ELL2O00472 640 aaPredicted RBP16.18■□□□□ 0.18
TREX1-204ENST00000492235 SCAF8Q9UPN6 1271 aaKnown RBP16.18■□□□□ 0.18
TREX1-204ENST00000492235 ZNF609O15014 1411 aa16.18■□□□□ 0.18
TREX1-204ENST00000492235 PDE8AO60658 829 aa16.17■□□□□ 0.18
TREX1-204ENST00000492235 PCCAP05165 728 aaPredicted RBP16.17■□□□□ 0.18
TREX1-204ENST00000492235 USP17L8P0C7I0 530 aa16.17■□□□□ 0.18
TREX1-204ENST00000492235 CCDC191Q8NCU4 936 aa16.17■□□□□ 0.18
TREX1-204ENST00000492235 MYOZ2Q9NPC6 264 aa16.17■□□□□ 0.18
TREX1-204ENST00000492235 CWC25Q9NXE8 425 aaPredicted RBP16.17■□□□□ 0.18
TREX1-204ENST00000492235 PAPPA2Q9BXP8 1791 aa16.17■□□□□ 0.18
TREX1-204ENST00000492235 XDHP47989 1333 aa16.17■□□□□ 0.18
TREX1-204ENST00000492235 DDX10Q13206 875 aaKnown RBP16.16■□□□□ 0.18
TREX1-204ENST00000492235 MOB2Q70IA6 237 aa16.16■□□□□ 0.18
TREX1-204ENST00000492235 CTU1Q7Z7A3 348 aaKnown RBP16.16■□□□□ 0.18
TREX1-204ENST00000492235 ANKRD18AQ8IVF6 992 aa16.16■□□□□ 0.18
TREX1-204ENST00000492235 GMLQ99445 158 aa16.16■□□□□ 0.18
TREX1-204ENST00000492235 SPEF2Q9C093 1822 aa16.15■□□□□ 0.18
TREX1-204ENST00000492235 USP17L3A6NCW0 530 aa16.15■□□□□ 0.18
TREX1-204ENST00000492235 USP17L4A6NCW7 530 aa16.15■□□□□ 0.18
TREX1-204ENST00000492235 ZNF853P0CG23 659 aa16.15■□□□□ 0.18
TREX1-204ENST00000492235 FKBP1BP68106 108 aa16.15■□□□□ 0.18
TREX1-204ENST00000492235 USP17L1Q7RTZ2 530 aa16.15■□□□□ 0.18
TREX1-204ENST00000492235 PITPNM2Q9BZ72 1349 aa16.15■□□□□ 0.18
TREX1-204ENST00000492235 WTIPA6NIX2 430 aaPredicted RBP16.14■□□□□ 0.17
TREX1-204ENST00000492235 ATP2B4P23634 1241 aa16.14■□□□□ 0.17
TREX1-204ENST00000492235 PRAMEF18Q5VWM3 479 aa16.14■□□□□ 0.17
TREX1-204ENST00000492235 PODNQ7Z5L7 613 aa16.14■□□□□ 0.17
TREX1-204ENST00000492235 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
TREX1-204ENST00000492235 METTL22Q9BUU2 404 aaPredicted RBP16.14■□□□□ 0.17
TREX1-204ENST00000492235 IFT57Q9NWB7 429 aa16.14■□□□□ 0.17
TREX1-204ENST00000492235 UBE2Q2LH0YL09 131 aa16.13■□□□□ 0.17
TREX1-204ENST00000492235 NBPF9Q3BBW0 867 aa16.13■□□□□ 0.17
TREX1-204ENST00000492235 MXD3Q9BW11 206 aa16.13■□□□□ 0.17
TREX1-204ENST00000492235 TBC1D8O95759 1140 aa16.12■□□□□ 0.17
TREX1-204ENST00000492235 DDX58O95786 925 aaKnown RBP16.12■□□□□ 0.17
TREX1-204ENST00000492235 CTSWP56202 376 aa16.12■□□□□ 0.17
TREX1-204ENST00000492235 GNAI1P63096 354 aa16.12■□□□□ 0.17
TREX1-204ENST00000492235 TTLL12Q14166 644 aaPredicted RBP16.12■□□□□ 0.17
TREX1-204ENST00000492235 C8orf58Q8NAV2 365 aa16.12■□□□□ 0.17
TREX1-204ENST00000492235 FBXW7Q969H0 707 aa16.12■□□□□ 0.17
TREX1-204ENST00000492235 CDC5LQ99459 802 aaKnown RBP16.12■□□□□ 0.17
TREX1-204ENST00000492235 MAP3K2Q9Y2U5 619 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms