RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CASP7P55210 303 aa10.77□□□□□ -0.69
SMARCB1-207ENST00000491967 FMR1Q06787 632 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMARCB1-207ENST00000491967 DEFB115Q30KQ5 88 aa10.77□□□□□ -0.69
SMARCB1-207ENST00000491967 TNS4Q8IZW8 715 aa10.77□□□□□ -0.69
SMARCB1-207ENST00000491967 PLA2G12BQ9BX93 195 aa10.77□□□□□ -0.69
SMARCB1-207ENST00000491967 STK31Q9BXU1 1019 aa10.77□□□□□ -0.69
SMARCB1-207ENST00000491967 CNOT7Q9UIV1 285 aaKnown RBP10.77□□□□□ -0.69
SMARCB1-207ENST00000491967 FANCIQ9NVI1 1328 aa10.77□□□□□ -0.69
SMARCB1-207ENST00000491967 TRAF5O00463 557 aa10.76□□□□□ -0.69
SMARCB1-207ENST00000491967 CTSWP56202 376 aa10.76□□□□□ -0.69
SMARCB1-207ENST00000491967 JARID2Q92833 1246 aaPredicted RBP10.76□□□□□ -0.69
SMARCB1-207ENST00000491967 HHIPL1Q96JK4 782 aa10.76□□□□□ -0.69
SMARCB1-207ENST00000491967 EYA3Q99504 573 aa10.76□□□□□ -0.69
SMARCB1-207ENST00000491967 DBNDD1Q9H9R9 158 aa10.76□□□□□ -0.69
SMARCB1-207ENST00000491967 KCNQ5Q9NR82 932 aa10.76□□□□□ -0.69
SMARCB1-207ENST00000491967 BSDC1Q9NW68 430 aaPredicted RBP10.76□□□□□ -0.69
SMARCB1-207ENST00000491967 TLL2Q9Y6L7 1015 aa10.76□□□□□ -0.69
SMARCB1-207ENST00000491967 SHTN1A0MZ66 631 aa10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 C6orf229H3BNL8 230 aa10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 CSF1RP07333 972 aa10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 NEXNQ0ZGT2 675 aa10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 FLIIQ13045 1269 aa10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 GCKRQ14397 625 aa10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 CWF19L2Q2TBE0 894 aaKnown RBP10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 MICALL2Q8IY33 904 aa10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 TRPM4Q8TD43 1214 aa10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 GMLQ99445 158 aa10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 ZC3H12CQ9C0D7 883 aaKnown RBP10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 SPINK5Q9NQ38 1064 aaPredicted RBP10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 ZNF521Q96K83 1311 aa10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 WDR33Q9C0J8 1336 aaKnown RBP10.75□□□□□ -0.69
SMARCB1-207ENST00000491967 ZNF646O15015 1829 aaPredicted RBP10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 H7C1D1 291 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 RIMBP2O15034 1052 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 FOXN1O15353 648 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 ECE2O60344 883 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 ZNF280AP59817 542 aaPredicted RBP10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 CDC37L1Q7L3B6 337 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 SAPCD2Q86UD0 394 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 ANKRD18AQ8IVF6 992 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 LINS1Q8NG48 757 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 CDC5LQ99459 802 aaKnown RBP10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 BCL2L13Q9BXK5 485 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 GREM2Q9H772 168 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 PRDM10Q9NQV6 1147 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 GGA1Q9UJY5 639 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 MINPP1Q9UNW1 487 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 ZBTB12Q9Y330 459 aaPredicted RBP10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 XDHP47989 1333 aa10.74□□□□□ -0.69
SMARCB1-207ENST00000491967 UFL1O94874 794 aa10.73□□□□□ -0.69
SMARCB1-207ENST00000491967 EGFRP00533 1210 aa10.73□□□□□ -0.69
SMARCB1-207ENST00000491967 ATP2B4P23634 1241 aa10.73□□□□□ -0.69
SMARCB1-207ENST00000491967 EXOSC9Q06265 439 aaKnown RBP10.73□□□□□ -0.69
SMARCB1-207ENST00000491967 DOK7Q18PE1 504 aa10.73□□□□□ -0.69
SMARCB1-207ENST00000491967 PODNQ7Z5L7 613 aa10.73□□□□□ -0.69
SMARCB1-207ENST00000491967 DNAAF4Q8WXU2 420 aa10.73□□□□□ -0.69
SMARCB1-207ENST00000491967 GPR101Q96P66 508 aaPredicted RBP10.73□□□□□ -0.69
SMARCB1-207ENST00000491967 GLIS2Q9BZE0 524 aaPredicted RBP10.73□□□□□ -0.69
SMARCB1-207ENST00000491967 PCDH10Q9P2E7 1040 aa10.73□□□□□ -0.69
SMARCB1-207ENST00000491967 ANKIB1Q9P2G1 1089 aa10.73□□□□□ -0.69
SMARCB1-207ENST00000491967 WTIPA6NIX2 430 aaPredicted RBP10.72□□□□□ -0.69
SMARCB1-207ENST00000491967 MAP2K2P36507 400 aa10.72□□□□□ -0.69
SMARCB1-207ENST00000491967 SAMD7Q7Z3H4 446 aa10.72□□□□□ -0.69
SMARCB1-207ENST00000491967 UBE3BQ7Z3V4 1068 aa10.72□□□□□ -0.69
SMARCB1-207ENST00000491967 AGBL3Q8NEM8 1001 aa10.72□□□□□ -0.69
SMARCB1-207ENST00000491967 ABT1Q9ULW3 272 aaKnown RBP10.72□□□□□ -0.69
SMARCB1-207ENST00000491967 SPEF2Q9C093 1822 aa10.72□□□□□ -0.69
SMARCB1-207ENST00000491967 CELF2O95319 508 aaKnown RBP10.71□□□□□ -0.69
SMARCB1-207ENST00000491967 ECE1P42892 770 aa10.71□□□□□ -0.69
SMARCB1-207ENST00000491967 CTCFP49711 727 aaPredicted RBP10.71□□□□□ -0.69
SMARCB1-207ENST00000491967 FOXO4P98177 505 aa10.71□□□□□ -0.69
SMARCB1-207ENST00000491967 MAP2K1Q02750 393 aaPredicted RBP10.71□□□□□ -0.69
SMARCB1-207ENST00000491967 BEND3Q5T5X7 828 aa10.71□□□□□ -0.69
SMARCB1-207ENST00000491967 RSBN1LQ6PCB5 846 aaPredicted RBP10.71□□□□□ -0.69
SMARCB1-207ENST00000491967 CAPNS2Q96L46 248 aa10.71□□□□□ -0.69
SMARCB1-207ENST00000491967 CCDC85AQ96PX6 553 aaPredicted RBP10.71□□□□□ -0.69
SMARCB1-207ENST00000491967 MYH16Q9H6N6 1097 aa10.71□□□□□ -0.69
SMARCB1-207ENST00000491967 MED23Q9ULK4 1368 aa10.71□□□□□ -0.69
SMARCB1-207ENST00000491967 IRS2Q9Y4H2 1338 aa10.7□□□□□ -0.7
SMARCB1-207ENST00000491967 MMP14P50281 582 aa10.7□□□□□ -0.7
SMARCB1-207ENST00000491967 CCT4P50991 539 aaKnown RBP10.7□□□□□ -0.7
SMARCB1-207ENST00000491967 FKBP5Q13451 457 aaPredicted RBP10.7□□□□□ -0.7
SMARCB1-207ENST00000491967 C15orf52Q6ZUT6 534 aaKnown RBP10.7□□□□□ -0.7
SMARCB1-207ENST00000491967 USP48Q86UV5 1035 aa10.7□□□□□ -0.7
SMARCB1-207ENST00000491967 LEMD3Q9Y2U8 911 aa10.7□□□□□ -0.7
SMARCB1-207ENST00000491967 USP17L3A6NCW0 530 aa10.69□□□□□ -0.7
SMARCB1-207ENST00000491967 USP17L4A6NCW7 530 aa10.69□□□□□ -0.7
SMARCB1-207ENST00000491967 HSPA8P11142 646 aaKnown RBP10.69□□□□□ -0.7
SMARCB1-207ENST00000491967 ITGA6P23229 1130 aa10.69□□□□□ -0.7
SMARCB1-207ENST00000491967 KIF4BQ2VIQ3 1234 aa10.69□□□□□ -0.7
SMARCB1-207ENST00000491967 TBC1D10BQ4KMP7 808 aaPredicted RBP10.69□□□□□ -0.7
SMARCB1-207ENST00000491967 DACT2Q5SW24 774 aa10.69□□□□□ -0.7
SMARCB1-207ENST00000491967 CYP4F22Q6NT55 531 aa10.69□□□□□ -0.7
SMARCB1-207ENST00000491967 USP17L1Q7RTZ2 530 aa10.69□□□□□ -0.7
SMARCB1-207ENST00000491967 TXNRD3Q86VQ6 643 aa10.69□□□□□ -0.7
SMARCB1-207ENST00000491967 COA1Q9GZY4 146 aa10.69□□□□□ -0.7
SMARCB1-207ENST00000491967 A0A1B0GUL6 1792 aa10.68□□□□□ -0.7
SMARCB1-207ENST00000491967 F6X3S4 739 aa10.68□□□□□ -0.7
SMARCB1-207ENST00000491967 USP17L8P0C7I0 530 aa10.68□□□□□ -0.7
SMARCB1-207ENST00000491967 IGHMBP2P38935 993 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms