RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 PTPN12Q05209 780 aaKnown RBP28.93■■■□□ 2.22
SCN5A-213ENST00000491944 GRIPAP1Q4V328 841 aa28.93■■■□□ 2.22
SCN5A-213ENST00000491944 PUS3Q9BZE2 481 aaKnown RBP28.93■■■□□ 2.22
SCN5A-213ENST00000491944 ANKIB1Q9P2G1 1089 aa28.93■■■□□ 2.22
SCN5A-213ENST00000491944 NSFL1CQ9UNZ2 370 aaKnown RBP28.93■■■□□ 2.22
SCN5A-213ENST00000491944 PA2G4Q9UQ80 394 aaKnown RBP28.93■■■□□ 2.22
SCN5A-213ENST00000491944 SNED1Q8TER0 1413 aa28.92■■■□□ 2.22
SCN5A-213ENST00000491944 NFKBIEO00221 500 aa28.92■■■□□ 2.22
SCN5A-213ENST00000491944 SIL1Q9H173 461 aa28.92■■■□□ 2.22
SCN5A-213ENST00000491944 TAOK3Q9H2K8 898 aa28.92■■■□□ 2.22
SCN5A-213ENST00000491944 EXOC6Q8TAG9 804 aa28.91■■■□□ 2.22
SCN5A-213ENST00000491944 A0A1B0GUL6 1792 aa28.91■■■□□ 2.22
SCN5A-213ENST00000491944 FKBP4Q02790 459 aaKnown RBP eCLIP28.9■■■□□ 2.22
SCN5A-213ENST00000491944 CHRNDQ07001 517 aa28.9■■■□□ 2.22
SCN5A-213ENST00000491944 POLA2Q14181 598 aa28.9■■■□□ 2.22
SCN5A-213ENST00000491944 LRRC24Q50LG9 513 aa28.9■■■□□ 2.22
SCN5A-213ENST00000491944 RPAP2Q8IXW5 612 aaPredicted RBP28.9■■■□□ 2.22
SCN5A-213ENST00000491944 LTBP1Q14766 1721 aa28.9■■■□□ 2.22
SCN5A-213ENST00000491944 SSH3Q8TE77 659 aa28.89■■■□□ 2.22
SCN5A-213ENST00000491944 COPRSQ9NQ92 184 aa28.89■■■□□ 2.22
SCN5A-213ENST00000491944 XDHP47989 1333 aa28.89■■■□□ 2.22
SCN5A-213ENST00000491944 CCDC88AQ3V6T2 1871 aa28.89■■■□□ 2.22
SCN5A-213ENST00000491944 EYA2O00167 538 aa28.88■■■□□ 2.21
SCN5A-213ENST00000491944 HELBQ8NG08 1087 aaPredicted RBP28.88■■■□□ 2.21
SCN5A-213ENST00000491944 PSMD1Q99460 953 aa28.88■■■□□ 2.21
SCN5A-213ENST00000491944 ANKRD2Q9GZV1 360 aa28.88■■■□□ 2.21
SCN5A-213ENST00000491944 LTBP3Q9NS15 1303 aa28.88■■■□□ 2.21
SCN5A-213ENST00000491944 DUOX1Q9NRD9 1551 aa28.88■■■□□ 2.21
SCN5A-213ENST00000491944 C6orf229H3BNL8 230 aa28.88■■■□□ 2.21
SCN5A-213ENST00000491944 PODXL2Q9NZ53 605 aa28.88■■■□□ 2.21
SCN5A-213ENST00000491944 GGA1Q9UJY5 639 aa28.88■■■□□ 2.21
SCN5A-213ENST00000491944 RIPOR2Q9Y4F9 1068 aa28.88■■■□□ 2.21
SCN5A-213ENST00000491944 SBF1O95248 1867 aa28.87■■■□□ 2.21
SCN5A-213ENST00000491944 HMMRO75330 724 aa28.87■■■□□ 2.21
SCN5A-213ENST00000491944 UFL1O94874 794 aa28.87■■■□□ 2.21
SCN5A-213ENST00000491944 METTL24Q5JXM2 366 aa28.87■■■□□ 2.21
SCN5A-213ENST00000491944 SUPT20HQ8NEM7 779 aa28.87■■■□□ 2.21
SCN5A-213ENST00000491944 ZNF277Q9NRM2 450 aaPredicted RBP28.87■■■□□ 2.21
SCN5A-213ENST00000491944 MROH5Q6ZUA9 1318 aa28.87■■■□□ 2.21
SCN5A-213ENST00000491944 RTFDC1Q9BY42 306 aaPredicted RBP28.86■■■□□ 2.21
SCN5A-213ENST00000491944 FBXO3Q9UK99 471 aa28.86■■■□□ 2.21
SCN5A-213ENST00000491944 TAF5LO75529 589 aa28.85■■■□□ 2.21
SCN5A-213ENST00000491944 CIAO1O76071 339 aa28.85■■■□□ 2.21
SCN5A-213ENST00000491944 SIRT2Q8IXJ6 389 aa28.85■■■□□ 2.21
SCN5A-213ENST00000491944 TBC1D16Q8TBP0 767 aa28.85■■■□□ 2.21
SCN5A-213ENST00000491944 POLLQ9UGP5 575 aa28.85■■■□□ 2.21
SCN5A-213ENST00000491944 ATP2B4P23634 1241 aa28.84■■■□□ 2.21
SCN5A-213ENST00000491944 KCNJ4P48050 445 aa28.84■■■□□ 2.21
SCN5A-213ENST00000491944 AAMPQ13685 434 aa28.84■■■□□ 2.21
SCN5A-213ENST00000491944 ATG9AQ7Z3C6 839 aa28.84■■■□□ 2.21
SCN5A-213ENST00000491944 LMNB1P20700 586 aa28.83■■■□□ 2.21
SCN5A-213ENST00000491944 G3BP1Q13283 466 aaKnown RBP eCLIP28.83■■■□□ 2.21
SCN5A-213ENST00000491944 PCDHB15Q9Y5E8 787 aa28.83■■■□□ 2.21
SCN5A-213ENST00000491944 CHD4Q14839 1912 aa28.82■■■□□ 2.2
SCN5A-213ENST00000491944 SURF6O75683 361 aaKnown RBP28.82■■■□□ 2.2
SCN5A-213ENST00000491944 IL15P40933 162 aaPredicted RBP28.82■■■□□ 2.2
SCN5A-213ENST00000491944 PRELPP51888 382 aa28.82■■■□□ 2.2
SCN5A-213ENST00000491944 OS9Q13438 667 aaPredicted RBP28.82■■■□□ 2.2
SCN5A-213ENST00000491944 GPR101Q96P66 508 aaPredicted RBP28.82■■■□□ 2.2
SCN5A-213ENST00000491944 LEMD3Q9Y2U8 911 aa28.82■■■□□ 2.2
SCN5A-213ENST00000491944 WTIPA6NIX2 430 aaPredicted RBP28.81■■■□□ 2.2
SCN5A-213ENST00000491944 IARSP41252 1262 aaKnown RBP28.81■■■□□ 2.2
SCN5A-213ENST00000491944 EYA3Q99504 573 aa28.81■■■□□ 2.2
SCN5A-213ENST00000491944 RNF181Q9P0P0 153 aa28.81■■■□□ 2.2
SCN5A-213ENST00000491944 ZNF804BA4D1E1 1349 aa28.8■■■□□ 2.2
SCN5A-213ENST00000491944 PPIP5K2O43314 1243 aa28.8■■■□□ 2.2
SCN5A-213ENST00000491944 AOC3Q16853 763 aa28.8■■■□□ 2.2
SCN5A-213ENST00000491944 C9orf131Q5VYM1 1079 aa28.8■■■□□ 2.2
SCN5A-213ENST00000491944 UTRNP46939 3433 aa28.79■■■□□ 2.2
SCN5A-213ENST00000491944 DICER1Q9UPY3 1922 aaKnown RBP28.79■■■□□ 2.2
SCN5A-213ENST00000491944 SNAP23O00161 211 aa28.79■■■□□ 2.2
SCN5A-213ENST00000491944 WASHC4Q2M389 1173 aa28.79■■■□□ 2.2
SCN5A-213ENST00000491944 CEP126Q9P2H0 1117 aa28.79■■■□□ 2.2
SCN5A-213ENST00000491944 RIMBP2O15034 1052 aa28.78■■■□□ 2.2
SCN5A-213ENST00000491944 LARGE2Q8N3Y3 721 aa28.78■■■□□ 2.2
SCN5A-213ENST00000491944 VGLL2Q8N8G2 317 aa28.78■■■□□ 2.2
SCN5A-213ENST00000491944 EXOC6BQ9Y2D4 811 aa28.78■■■□□ 2.2
SCN5A-213ENST00000491944 NOP58Q9Y2X3 529 aaKnown RBP28.78■■■□□ 2.2
SCN5A-213ENST00000491944 PDE8BO95263 885 aa28.77■■■□□ 2.2
SCN5A-213ENST00000491944 ZC3H12CQ9C0D7 883 aaKnown RBP28.77■■■□□ 2.2
SCN5A-213ENST00000491944 TIAM2Q8IVF5 1701 aa28.77■■■□□ 2.2
SCN5A-213ENST00000491944 NEFLP07196 543 aa28.76■■■□□ 2.2
SCN5A-213ENST00000491944 KIAA2012Q0VF49 1180 aa28.76■■■□□ 2.2
SCN5A-213ENST00000491944 VPS33BQ9H267 617 aa28.76■■■□□ 2.2
SCN5A-213ENST00000491944 TFCP2Q12800 502 aa28.75■■■□□ 2.19
SCN5A-213ENST00000491944 UBE4AQ14139 1066 aa28.75■■■□□ 2.19
SCN5A-213ENST00000491944 PUM3Q15397 648 aaKnown RBP28.75■■■□□ 2.19
SCN5A-213ENST00000491944 HSP90AB4PQ58FF6 505 aa28.75■■■□□ 2.19
SCN5A-213ENST00000491944 MED23Q9ULK4 1368 aa28.74■■■□□ 2.19
SCN5A-213ENST00000491944 KLRK1P26718 216 aa28.74■■■□□ 2.19
SCN5A-213ENST00000491944 NIM1KQ8IY84 436 aa28.74■■■□□ 2.19
SCN5A-213ENST00000491944 JDP2Q8WYK2 163 aa28.74■■■□□ 2.19
SCN5A-213ENST00000491944 COL4A5P29400 1685 aa28.73■■■□□ 2.19
SCN5A-213ENST00000491944 G3V3G9 751 aa28.73■■■□□ 2.19
SCN5A-213ENST00000491944 SASH1O94885 1247 aa28.73■■■□□ 2.19
SCN5A-213ENST00000491944 DCAF8Q5TAQ9 597 aa28.73■■■□□ 2.19
SCN5A-213ENST00000491944 APBB1O00213 710 aa28.72■■■□□ 2.19
SCN5A-213ENST00000491944 ATP2B3Q16720 1220 aa28.72■■■□□ 2.19
SCN5A-213ENST00000491944 DOK7Q18PE1 504 aa28.72■■■□□ 2.19
SCN5A-213ENST00000491944 TXNRD3Q86VQ6 643 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms