RNA–Protein interactions for RNA: ENST00000491574.2

SMARCA2-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-217ENST00000491574 PRAMEF18Q5VWM3 479 aa13.07□□□□□ -0.32
SMARCA2-217ENST00000491574 ZNF296Q8WUU4 475 aaPredicted RBP13.07□□□□□ -0.32
SMARCA2-217ENST00000491574 HDAC9Q9UKV0 1011 aa13.07□□□□□ -0.32
SMARCA2-217ENST00000491574 COL4A1P02462 1669 aa13.07□□□□□ -0.32
SMARCA2-217ENST00000491574 DLG5Q8TDM6 1919 aa13.06□□□□□ -0.32
SMARCA2-217ENST00000491574 ATP5J2-PTCD1G3V325 749 aa13.06□□□□□ -0.32
SMARCA2-217ENST00000491574 UBE2Q2LH0YL09 131 aa13.06□□□□□ -0.32
SMARCA2-217ENST00000491574 VIL1P09327 827 aaKnown RBP13.06□□□□□ -0.32
SMARCA2-217ENST00000491574 MKRN3Q13064 507 aaKnown RBP13.06□□□□□ -0.32
SMARCA2-217ENST00000491574 KRT24Q2M2I5 525 aa13.06□□□□□ -0.32
SMARCA2-217ENST00000491574 HSP90AB3PQ58FF7 597 aa13.06□□□□□ -0.32
SMARCA2-217ENST00000491574 TBC1D16Q8TBP0 767 aa13.06□□□□□ -0.32
SMARCA2-217ENST00000491574 TMC4Q7Z404 712 aa13.05□□□□□ -0.32
SMARCA2-217ENST00000491574 AKAP11Q9UKA4 1901 aa13.05□□□□□ -0.32
SMARCA2-217ENST00000491574 ANKRD36CQ5JPF3 1778 aa13.04□□□□□ -0.32
SMARCA2-217ENST00000491574 SF3B3Q15393 1217 aaKnown RBP13.04□□□□□ -0.32
SMARCA2-217ENST00000491574 EYA3Q99504 573 aa13.04□□□□□ -0.32
SMARCA2-217ENST00000491574 ZC3H12CQ9C0D7 883 aaKnown RBP13.04□□□□□ -0.32
SMARCA2-217ENST00000491574 R3HDMLQ9H3Y0 253 aa13.04□□□□□ -0.32
SMARCA2-217ENST00000491574 G3V3G9 751 aa13.03□□□□□ -0.32
SMARCA2-217ENST00000491574 RIPK4P57078 832 aa13.03□□□□□ -0.32
SMARCA2-217ENST00000491574 RPS8P62241 208 aaKnown RBP13.03□□□□□ -0.32
SMARCA2-217ENST00000491574 DCAF8Q5TAQ9 597 aa13.03□□□□□ -0.32
SMARCA2-217ENST00000491574 SEC31BQ9NQW1 1179 aa13.03□□□□□ -0.32
SMARCA2-217ENST00000491574 WTIPA6NIX2 430 aaPredicted RBP13.02□□□□□ -0.33
SMARCA2-217ENST00000491574 GPR25O00155 361 aa13.02□□□□□ -0.33
SMARCA2-217ENST00000491574 UFL1O94874 794 aa13.02□□□□□ -0.33
SMARCA2-217ENST00000491574 ZNF280AP59817 542 aaPredicted RBP13.02□□□□□ -0.33
SMARCA2-217ENST00000491574 PKN2Q16513 984 aaKnown RBP13.02□□□□□ -0.33
SMARCA2-217ENST00000491574 REM2Q8IYK8 340 aaPredicted RBP13.02□□□□□ -0.33
SMARCA2-217ENST00000491574 CHPF2Q9P2E5 772 aa13.02□□□□□ -0.33
SMARCA2-217ENST00000491574 MAPK8IP3Q9UPT6 1336 aa13.02□□□□□ -0.33
SMARCA2-217ENST00000491574 LRRC37AA6NMS7 1700 aa13.02□□□□□ -0.33
SMARCA2-217ENST00000491574 SCN9AQ15858 1988 aa13.01□□□□□ -0.33
SMARCA2-217ENST00000491574 MKI67P46013 3256 aaKnown RBP13.01□□□□□ -0.33
SMARCA2-217ENST00000491574 TTLL12Q14166 644 aaPredicted RBP13.01□□□□□ -0.33
SMARCA2-217ENST00000491574 RSBN1LQ6PCB5 846 aaPredicted RBP13.01□□□□□ -0.33
SMARCA2-217ENST00000491574 ANKRD13DQ6ZTN6 518 aa13.01□□□□□ -0.33
SMARCA2-217ENST00000491574 ISCA1Q9BUE6 129 aa13.01□□□□□ -0.33
SMARCA2-217ENST00000491574 MXD3Q9BW11 206 aa13.01□□□□□ -0.33
SMARCA2-217ENST00000491574 MYOZ2Q9NPC6 264 aa13.01□□□□□ -0.33
SMARCA2-217ENST00000491574 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.01□□□□□ -0.33
SMARCA2-217ENST00000491574 ANKIB1Q9P2G1 1089 aa13.01□□□□□ -0.33
SMARCA2-217ENST00000491574 IRS4O14654 1257 aaPredicted RBP13□□□□□ -0.33
SMARCA2-217ENST00000491574 USP17L8P0C7I0 530 aa13□□□□□ -0.33
SMARCA2-217ENST00000491574 NBPF9Q3BBW0 867 aa13□□□□□ -0.33
SMARCA2-217ENST00000491574 HABP4Q5JVS0 413 aaKnown RBP13□□□□□ -0.33
SMARCA2-217ENST00000491574 PLBD2Q8NHP8 589 aa13□□□□□ -0.33
SMARCA2-217ENST00000491574 JARID2Q92833 1246 aaPredicted RBP13□□□□□ -0.33
SMARCA2-217ENST00000491574 CCDC85AQ96PX6 553 aaPredicted RBP13□□□□□ -0.33
SMARCA2-217ENST00000491574 GMLQ99445 158 aa13□□□□□ -0.33
SMARCA2-217ENST00000491574 LAS1LQ9Y4W2 734 aaKnown RBP13□□□□□ -0.33
SMARCA2-217ENST00000491574 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
SMARCA2-217ENST00000491574 TM4SF4P48230 202 aa12.99□□□□□ -0.33
SMARCA2-217ENST00000491574 FKBP1BP68106 108 aa12.99□□□□□ -0.33
SMARCA2-217ENST00000491574 PRKG1Q13976 671 aa12.99□□□□□ -0.33
SMARCA2-217ENST00000491574 FBXO46Q6PJ61 603 aaPredicted RBP12.99□□□□□ -0.33
SMARCA2-217ENST00000491574 AGBL3Q8NEM8 1001 aa12.99□□□□□ -0.33
SMARCA2-217ENST00000491574 PODXL2Q9NZ53 605 aa12.99□□□□□ -0.33
SMARCA2-217ENST00000491574 GGA1Q9UJY5 639 aa12.99□□□□□ -0.33
SMARCA2-217ENST00000491574 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
SMARCA2-217ENST00000491574 NEUROD2Q15784 382 aa12.98□□□□□ -0.33
SMARCA2-217ENST00000491574 FZD1Q9UP38 647 aa12.98□□□□□ -0.33
SMARCA2-217ENST00000491574 FKTNO75072 461 aa12.97□□□□□ -0.33
SMARCA2-217ENST00000491574 PTPN12Q05209 780 aaKnown RBP12.97□□□□□ -0.33
SMARCA2-217ENST00000491574 HDGFL1Q5TGJ6 251 aa12.97□□□□□ -0.33
SMARCA2-217ENST00000491574 PAPPA2Q9BXP8 1791 aa12.97□□□□□ -0.33
SMARCA2-217ENST00000491574 USP17L3A6NCW0 530 aa12.96□□□□□ -0.33
SMARCA2-217ENST00000491574 USP17L4A6NCW7 530 aa12.96□□□□□ -0.33
SMARCA2-217ENST00000491574 TMPOP42166 694 aaKnown RBP12.96□□□□□ -0.33
SMARCA2-217ENST00000491574 USP17L1Q7RTZ2 530 aa12.96□□□□□ -0.33
SMARCA2-217ENST00000491574 PNNQ9H307 717 aaKnown RBP12.96□□□□□ -0.33
SMARCA2-217ENST00000491574 BABAM1Q9NWV8 329 aa12.96□□□□□ -0.33
SMARCA2-217ENST00000491574 HTTP42858 3142 aa12.96□□□□□ -0.34
SMARCA2-217ENST00000491574 PITPNM2Q9BZ72 1349 aa12.95□□□□□ -0.34
SMARCA2-217ENST00000491574 CHL1O00533 1208 aa12.95□□□□□ -0.34
SMARCA2-217ENST00000491574 SASH1O94885 1247 aa12.95□□□□□ -0.34
SMARCA2-217ENST00000491574 CCDC146Q8IYE0 955 aa12.95□□□□□ -0.34
SMARCA2-217ENST00000491574 FBXW7Q969H0 707 aa12.95□□□□□ -0.34
SMARCA2-217ENST00000491574 GCC1Q96CN9 775 aa12.95□□□□□ -0.34
SMARCA2-217ENST00000491574 CENPFP49454 3210 aa12.95□□□□□ -0.34
SMARCA2-217ENST00000491574 WNT10BO00744 389 aa12.94□□□□□ -0.34
SMARCA2-217ENST00000491574 ZBTB38Q8NAP3 1195 aaPredicted RBP12.94□□□□□ -0.34
SMARCA2-217ENST00000491574 TRIM17Q9Y577 477 aa12.94□□□□□ -0.34
SMARCA2-217ENST00000491574 SREBF2Q12772 1141 aa12.93□□□□□ -0.34
SMARCA2-217ENST00000491574 TRIM28Q13263 835 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-217ENST00000491574 NOM1Q5C9Z4 860 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-217ENST00000491574 DACT2Q5SW24 774 aa12.93□□□□□ -0.34
SMARCA2-217ENST00000491574 RIC3Q7Z5B4 369 aa12.93□□□□□ -0.34
SMARCA2-217ENST00000491574 MYD88Q99836 296 aa12.93□□□□□ -0.34
SMARCA2-217ENST00000491574 PHAXQ9H814 394 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-217ENST00000491574 DBF4Q9UBU7 674 aaPredicted RBP12.93□□□□□ -0.34
SMARCA2-217ENST00000491574 EN2P19622 333 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-217ENST00000491574 ATP2B4P23634 1241 aa12.92□□□□□ -0.34
SMARCA2-217ENST00000491574 NF2P35240 595 aa12.92□□□□□ -0.34
SMARCA2-217ENST00000491574 CCDC152Q4G0S7 254 aa12.92□□□□□ -0.34
SMARCA2-217ENST00000491574 SPRYD7Q5W111 196 aa12.92□□□□□ -0.34
SMARCA2-217ENST00000491574 OTOP1Q7RTM1 612 aa12.92□□□□□ -0.34
SMARCA2-217ENST00000491574 PODNQ7Z5L7 613 aa12.92□□□□□ -0.34
SMARCA2-217ENST00000491574 ANGEL1Q9UNK9 670 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms