RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 PODXL2Q9NZ53 605 aa10.56□□□□□ -0.72
LSM2-213ENST00000491421 CNTNAP1P78357 1384 aa10.55□□□□□ -0.72
LSM2-213ENST00000491421 ECE2O60344 883 aa10.55□□□□□ -0.72
LSM2-213ENST00000491421 GCKRQ14397 625 aa10.55□□□□□ -0.72
LSM2-213ENST00000491421 DOK7Q18PE1 504 aa10.55□□□□□ -0.72
LSM2-213ENST00000491421 TTLL11Q8NHH1 800 aa10.55□□□□□ -0.72
LSM2-213ENST00000491421 ZC3H12CQ9C0D7 883 aaKnown RBP10.55□□□□□ -0.72
LSM2-213ENST00000491421 GGA1Q9UJY5 639 aa10.55□□□□□ -0.72
LSM2-213ENST00000491421 G3V3G9 751 aa10.54□□□□□ -0.72
LSM2-213ENST00000491421 H7C1D1 291 aa10.54□□□□□ -0.72
LSM2-213ENST00000491421 H7C1W4 665 aa10.54□□□□□ -0.72
LSM2-213ENST00000491421 PSMD14O00487 310 aa10.54□□□□□ -0.72
LSM2-213ENST00000491421 HSPA1AP0DMV8 641 aaKnown RBP10.54□□□□□ -0.72
LSM2-213ENST00000491421 HSPA1BP0DMV9 641 aaKnown RBP10.54□□□□□ -0.72
LSM2-213ENST00000491421 DCAF8Q5TAQ9 597 aa10.54□□□□□ -0.72
LSM2-213ENST00000491421 IFFO2Q5TF58 517 aa10.54□□□□□ -0.72
LSM2-213ENST00000491421 MICALL2Q8IY33 904 aa10.54□□□□□ -0.72
LSM2-213ENST00000491421 LINS1Q8NG48 757 aa10.54□□□□□ -0.72
LSM2-213ENST00000491421 GREM2Q9H772 168 aa10.54□□□□□ -0.72
LSM2-213ENST00000491421 CNOT7Q9UIV1 285 aaKnown RBP10.54□□□□□ -0.72
LSM2-213ENST00000491421 ABT1Q9ULW3 272 aaKnown RBP10.54□□□□□ -0.72
LSM2-213ENST00000491421 ZBTB12Q9Y330 459 aaPredicted RBP10.54□□□□□ -0.72
LSM2-213ENST00000491421 XDHP47989 1333 aa10.54□□□□□ -0.72
LSM2-213ENST00000491421 RTL9Q8NET4 1388 aa10.53□□□□□ -0.72
LSM2-213ENST00000491421 TAF1P21675 1872 aa10.53□□□□□ -0.72
LSM2-213ENST00000491421 SHTN1A0MZ66 631 aa10.53□□□□□ -0.72
LSM2-213ENST00000491421 TRAF5O00463 557 aa10.53□□□□□ -0.72
LSM2-213ENST00000491421 RPS12P25398 132 aaKnown RBP10.53□□□□□ -0.72
LSM2-213ENST00000491421 FMR1Q06787 632 aaKnown RBP eCLIP10.53□□□□□ -0.72
LSM2-213ENST00000491421 TRPM4Q8TD43 1214 aa10.53□□□□□ -0.72
LSM2-213ENST00000491421 DPF2Q92785 391 aa10.53□□□□□ -0.72
LSM2-213ENST00000491421 KCNQ5Q9NR82 932 aa10.53□□□□□ -0.72
LSM2-213ENST00000491421 RASSF10A6NK89 507 aa10.52□□□□□ -0.73
LSM2-213ENST00000491421 F6X3S4 739 aa10.52□□□□□ -0.73
LSM2-213ENST00000491421 ATP2B4P23634 1241 aa10.52□□□□□ -0.73
LSM2-213ENST00000491421 VEGFBP49765 207 aa10.52□□□□□ -0.73
LSM2-213ENST00000491421 HIRAP54198 1017 aaPredicted RBP10.52□□□□□ -0.73
LSM2-213ENST00000491421 ZC3H15Q8WU90 426 aaKnown RBP10.52□□□□□ -0.73
LSM2-213ENST00000491421 PLA2G12BQ9BX93 195 aa10.52□□□□□ -0.73
LSM2-213ENST00000491421 BSDC1Q9NW68 430 aaPredicted RBP10.52□□□□□ -0.73
LSM2-213ENST00000491421 PGAP2Q9UHJ9 254 aa10.52□□□□□ -0.73
LSM2-213ENST00000491421 ITGA6P23229 1130 aa10.51□□□□□ -0.73
LSM2-213ENST00000491421 IGHMBP2P38935 993 aaKnown RBP10.51□□□□□ -0.73
LSM2-213ENST00000491421 CASP7P55210 303 aa10.51□□□□□ -0.73
LSM2-213ENST00000491421 DEFB115Q30KQ5 88 aa10.51□□□□□ -0.73
LSM2-213ENST00000491421 FAM161AQ3B820 660 aa10.51□□□□□ -0.73
LSM2-213ENST00000491421 BEND3Q5T5X7 828 aa10.51□□□□□ -0.73
LSM2-213ENST00000491421 SAMD7Q7Z3H4 446 aa10.51□□□□□ -0.73
LSM2-213ENST00000491421 GLIS2Q9BZE0 524 aaPredicted RBP10.51□□□□□ -0.73
LSM2-213ENST00000491421 MINPP1Q9UNW1 487 aa10.51□□□□□ -0.73
LSM2-213ENST00000491421 ZNF521Q96K83 1311 aa10.51□□□□□ -0.73
LSM2-213ENST00000491421 CSF1RP07333 972 aa10.5□□□□□ -0.73
LSM2-213ENST00000491421 VIL1P09327 827 aaKnown RBP10.5□□□□□ -0.73
LSM2-213ENST00000491421 TBC1D10BQ4KMP7 808 aaPredicted RBP10.5□□□□□ -0.73
LSM2-213ENST00000491421 COL13A1Q5TAT6 717 aaPredicted RBP10.5□□□□□ -0.73
LSM2-213ENST00000491421 CST9Q5W186 159 aa10.5□□□□□ -0.73
LSM2-213ENST00000491421 PAXIP1Q6ZW49 1069 aaPredicted RBP10.5□□□□□ -0.73
LSM2-213ENST00000491421 CDC37L1Q7L3B6 337 aa10.5□□□□□ -0.73
LSM2-213ENST00000491421 MPHOSPH8Q99549 860 aa10.5□□□□□ -0.73
LSM2-213ENST00000491421 MED23Q9ULK4 1368 aa10.5□□□□□ -0.73
LSM2-213ENST00000491421 WTIPA6NIX2 430 aaPredicted RBP10.49□□□□□ -0.73
LSM2-213ENST00000491421 CELF2O95319 508 aaKnown RBP10.49□□□□□ -0.73
LSM2-213ENST00000491421 EGFRP00533 1210 aa10.49□□□□□ -0.73
LSM2-213ENST00000491421 CCT4P50991 539 aaKnown RBP10.49□□□□□ -0.73
LSM2-213ENST00000491421 RBM26Q5T8P6 1007 aaKnown RBP10.49□□□□□ -0.73
LSM2-213ENST00000491421 RSBN1LQ6PCB5 846 aaPredicted RBP10.49□□□□□ -0.73
LSM2-213ENST00000491421 AIDAQ96BJ3 306 aa10.49□□□□□ -0.73
LSM2-213ENST00000491421 ZNF408Q9H9D4 720 aa10.49□□□□□ -0.73
LSM2-213ENST00000491421 TLL2Q9Y6L7 1015 aa10.49□□□□□ -0.73
LSM2-213ENST00000491421 WDR33Q9C0J8 1336 aaKnown RBP10.49□□□□□ -0.73
LSM2-213ENST00000491421 ANKRD18BA2A2Z9 1011 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 USP17L3A6NCW0 530 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 USP17L4A6NCW7 530 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 E9PSI1 815 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 GRM8O00222 908 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 ECE1P42892 770 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 GRM1Q13255 1194 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 KIF4BQ2VIQ3 1234 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 SLC4A10Q6U841 1118 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 USP17L1Q7RTZ2 530 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 PODNQ7Z5L7 613 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 USP48Q86UV5 1035 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 AGBL3Q8NEM8 1001 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 DCPSQ96C86 337 aaKnown RBP10.48□□□□□ -0.73
LSM2-213ENST00000491421 CAPNS2Q96L46 248 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 ANKRD2Q9GZV1 360 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 LEMD3Q9Y2U8 911 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 CHMP3Q9Y3E7 222 aa10.48□□□□□ -0.73
LSM2-213ENST00000491421 FOXN1O15353 648 aa10.47□□□□□ -0.73
LSM2-213ENST00000491421 ALDH1L1O75891 902 aa10.47□□□□□ -0.73
LSM2-213ENST00000491421 KCNJ4P48050 445 aa10.47□□□□□ -0.73
LSM2-213ENST00000491421 FOXO4P98177 505 aa10.47□□□□□ -0.73
LSM2-213ENST00000491421 IFIT5Q13325 482 aaKnown RBP10.47□□□□□ -0.73
LSM2-213ENST00000491421 KRT26Q7Z3Y9 468 aa10.47□□□□□ -0.73
LSM2-213ENST00000491421 SAPCD2Q86UD0 394 aa10.47□□□□□ -0.73
LSM2-213ENST00000491421 TNS4Q8IZW8 715 aa10.47□□□□□ -0.73
LSM2-213ENST00000491421 SRCIN1Q9C0H9 1055 aa10.47□□□□□ -0.73
LSM2-213ENST00000491421 COA1Q9GZY4 146 aa10.47□□□□□ -0.73
LSM2-213ENST00000491421 C9orf78Q9NZ63 289 aaPredicted RBP10.47□□□□□ -0.73
LSM2-213ENST00000491421 ZNF804BA4D1E1 1349 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms