RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 EYA3Q99504 573 aa20.21■□□□□ 0.83
SMPD4-220ENST00000491319 GLIS2Q9BZE0 524 aaPredicted RBP20.21■□□□□ 0.83
SMPD4-220ENST00000491319 WDR33Q9C0J8 1336 aaKnown RBP20.21■□□□□ 0.83
SMPD4-220ENST00000491319 ZNF646O15015 1829 aaPredicted RBP20.2■□□□□ 0.82
SMPD4-220ENST00000491319 UFL1O94874 794 aa20.2■□□□□ 0.82
SMPD4-220ENST00000491319 G2E3Q7L622 706 aa20.2■□□□□ 0.82
SMPD4-220ENST00000491319 KCNQ5Q9NR82 932 aa20.2■□□□□ 0.82
SMPD4-220ENST00000491319 PODXL2Q9NZ53 605 aa20.2■□□□□ 0.82
SMPD4-220ENST00000491319 IL16Q14005 1332 aa20.2■□□□□ 0.82
SMPD4-220ENST00000491319 CAPN15O75808 1086 aa20.19■□□□□ 0.82
SMPD4-220ENST00000491319 ZEB1P37275 1124 aaPredicted RBP20.19■□□□□ 0.82
SMPD4-220ENST00000491319 CWF19L2Q2TBE0 894 aaKnown RBP20.19■□□□□ 0.82
SMPD4-220ENST00000491319 PAXIP1Q6ZW49 1069 aaPredicted RBP20.19■□□□□ 0.82
SMPD4-220ENST00000491319 AIDAQ96BJ3 306 aa20.19■□□□□ 0.82
SMPD4-220ENST00000491319 WBP1LQ9NX94 342 aa20.19■□□□□ 0.82
SMPD4-220ENST00000491319 ANKIB1Q9P2G1 1089 aa20.19■□□□□ 0.82
SMPD4-220ENST00000491319 PGAP2Q9UHJ9 254 aa20.19■□□□□ 0.82
SMPD4-220ENST00000491319 H7C1D1 291 aa20.18■□□□□ 0.82
SMPD4-220ENST00000491319 ANP32CO43423 234 aa20.18■□□□□ 0.82
SMPD4-220ENST00000491319 CTSWP56202 376 aa20.18■□□□□ 0.82
SMPD4-220ENST00000491319 DPF2Q92785 391 aa20.18■□□□□ 0.82
SMPD4-220ENST00000491319 GGA1Q9UJY5 639 aa20.18■□□□□ 0.82
SMPD4-220ENST00000491319 TLL2Q9Y6L7 1015 aa20.18■□□□□ 0.82
SMPD4-220ENST00000491319 FANCIQ9NVI1 1328 aa20.18■□□□□ 0.82
SMPD4-220ENST00000491319 A0A1B0GUL6 1792 aa20.17■□□□□ 0.82
SMPD4-220ENST00000491319 CELF2O95319 508 aaKnown RBP20.17■□□□□ 0.82
SMPD4-220ENST00000491319 NEXNQ0ZGT2 675 aa20.17■□□□□ 0.82
SMPD4-220ENST00000491319 CYP4F22Q6NT55 531 aa20.17■□□□□ 0.82
SMPD4-220ENST00000491319 SAMD7Q7Z3H4 446 aa20.17■□□□□ 0.82
SMPD4-220ENST00000491319 ANKRD18AQ8IVF6 992 aa20.17■□□□□ 0.82
SMPD4-220ENST00000491319 ZC3H15Q8WU90 426 aaKnown RBP20.17■□□□□ 0.82
SMPD4-220ENST00000491319 CAPNS2Q96L46 248 aa20.17■□□□□ 0.82
SMPD4-220ENST00000491319 ZNF316A6NFI3 1004 aaPredicted RBP20.16■□□□□ 0.82
SMPD4-220ENST00000491319 NEURL1BA8MQ27 555 aa20.16■□□□□ 0.82
SMPD4-220ENST00000491319 EGFRP00533 1210 aa20.16■□□□□ 0.82
SMPD4-220ENST00000491319 SLC4A2P04920 1241 aa20.16■□□□□ 0.82
SMPD4-220ENST00000491319 CTCFP49711 727 aaPredicted RBP20.16■□□□□ 0.82
SMPD4-220ENST00000491319 GRM1Q13255 1194 aa20.16■□□□□ 0.82
SMPD4-220ENST00000491319 ZC3H12CQ9C0D7 883 aaKnown RBP20.16■□□□□ 0.82
SMPD4-220ENST00000491319 SALL2Q9Y467 1007 aaPredicted RBP20.16■□□□□ 0.82
SMPD4-220ENST00000491319 RPS12P25398 132 aaKnown RBP20.15■□□□□ 0.82
SMPD4-220ENST00000491319 TBC1D10BQ4KMP7 808 aaPredicted RBP20.15■□□□□ 0.82
SMPD4-220ENST00000491319 NCBP3Q53F19 620 aaKnown RBP20.15■□□□□ 0.82
SMPD4-220ENST00000491319 TTLL11Q8NHH1 800 aa20.15■□□□□ 0.82
SMPD4-220ENST00000491319 ZNF408Q9H9D4 720 aa20.15■□□□□ 0.82
SMPD4-220ENST00000491319 XDHP47989 1333 aa20.15■□□□□ 0.82
SMPD4-220ENST00000491319 ECE1P42892 770 aa20.14■□□□□ 0.81
SMPD4-220ENST00000491319 FLIIQ13045 1269 aa20.14■□□□□ 0.81
SMPD4-220ENST00000491319 CDC37L1Q7L3B6 337 aa20.14■□□□□ 0.81
SMPD4-220ENST00000491319 UBE3BQ7Z3V4 1068 aa20.14■□□□□ 0.81
SMPD4-220ENST00000491319 GREM2Q9H772 168 aa20.14■□□□□ 0.81
SMPD4-220ENST00000491319 PRDM10Q9NQV6 1147 aa20.14■□□□□ 0.81
SMPD4-220ENST00000491319 G3V3G9 751 aa20.13■□□□□ 0.81
SMPD4-220ENST00000491319 LBX1P52954 281 aa20.13■□□□□ 0.81
SMPD4-220ENST00000491319 DCAF8Q5TAQ9 597 aa20.13■□□□□ 0.81
SMPD4-220ENST00000491319 DLK2Q6UY11 383 aa20.13■□□□□ 0.81
SMPD4-220ENST00000491319 SAPCD2Q86UD0 394 aa20.13■□□□□ 0.81
SMPD4-220ENST00000491319 CDC5LQ99459 802 aaKnown RBP20.13■□□□□ 0.81
SMPD4-220ENST00000491319 ZNF609O15014 1411 aa20.12■□□□□ 0.81
SMPD4-220ENST00000491319 VIL1P09327 827 aaKnown RBP20.12■□□□□ 0.81
SMPD4-220ENST00000491319 HSPA8P11142 646 aaKnown RBP20.12■□□□□ 0.81
SMPD4-220ENST00000491319 MAP2K1Q02750 393 aaPredicted RBP20.12■□□□□ 0.81
SMPD4-220ENST00000491319 FKBP5Q13451 457 aaPredicted RBP20.12■□□□□ 0.81
SMPD4-220ENST00000491319 RBM26Q5T8P6 1007 aaKnown RBP20.12■□□□□ 0.81
SMPD4-220ENST00000491319 USP48Q86UV5 1035 aa20.12■□□□□ 0.81
SMPD4-220ENST00000491319 WTIPA6NIX2 430 aaPredicted RBP20.11■□□□□ 0.81
SMPD4-220ENST00000491319 H7C1W4 665 aa20.11■□□□□ 0.81
SMPD4-220ENST00000491319 WDR63Q8IWG1 891 aa20.11■□□□□ 0.81
SMPD4-220ENST00000491319 AOC2O75106 756 aa20.1■□□□□ 0.81
SMPD4-220ENST00000491319 ATP2B4P23634 1241 aa20.1■□□□□ 0.81
SMPD4-220ENST00000491319 EXOSC9Q06265 439 aaKnown RBP20.1■□□□□ 0.81
SMPD4-220ENST00000491319 GCKRQ14397 625 aa20.1■□□□□ 0.81
SMPD4-220ENST00000491319 KIF4BQ2VIQ3 1234 aa20.1■□□□□ 0.81
SMPD4-220ENST00000491319 DNAAF4Q8WXU2 420 aa20.1■□□□□ 0.81
SMPD4-220ENST00000491319 BSDC1Q9NW68 430 aaPredicted RBP20.1■□□□□ 0.81
SMPD4-220ENST00000491319 MED23Q9ULK4 1368 aa20.09■□□□□ 0.81
SMPD4-220ENST00000491319 ADM5C9JUS6 153 aa20.09■□□□□ 0.81
SMPD4-220ENST00000491319 VAMP4O75379 141 aa20.09■□□□□ 0.81
SMPD4-220ENST00000491319 KRT26Q7Z3Y9 468 aa20.09■□□□□ 0.81
SMPD4-220ENST00000491319 SPINK5Q9NQ38 1064 aaPredicted RBP20.09■□□□□ 0.81
SMPD4-220ENST00000491319 MINPP1Q9UNW1 487 aa20.09■□□□□ 0.81
SMPD4-220ENST00000491319 CASP7P55210 303 aa20.08■□□□□ 0.81
SMPD4-220ENST00000491319 FAM161AQ3B820 660 aa20.08■□□□□ 0.81
SMPD4-220ENST00000491319 RSBN1LQ6PCB5 846 aaPredicted RBP20.08■□□□□ 0.81
SMPD4-220ENST00000491319 HHIPL1Q96JK4 782 aa20.08■□□□□ 0.81
SMPD4-220ENST00000491319 PLA2G12BQ9BX93 195 aa20.08■□□□□ 0.81
SMPD4-220ENST00000491319 CASP8AP2Q9UKL3 1982 aa20.08■□□□□ 0.8
SMPD4-220ENST00000491319 ASTN2O75129 1339 aaPredicted RBP20.07■□□□□ 0.8
SMPD4-220ENST00000491319 DCPSQ96C86 337 aaKnown RBP20.07■□□□□ 0.8
SMPD4-220ENST00000491319 MYH16Q9H6N6 1097 aa20.07■□□□□ 0.8
SMPD4-220ENST00000491319 GGA3Q9NZ52 723 aa20.07■□□□□ 0.8
SMPD4-220ENST00000491319 ITGA6P23229 1130 aa20.06■□□□□ 0.8
SMPD4-220ENST00000491319 MAP2K2P36507 400 aa20.06■□□□□ 0.8
SMPD4-220ENST00000491319 CCT4P50991 539 aaKnown RBP20.06■□□□□ 0.8
SMPD4-220ENST00000491319 FAM9BQ8IZU0 186 aa20.06■□□□□ 0.8
SMPD4-220ENST00000491319 AGBL3Q8NEM8 1001 aa20.06■□□□□ 0.8
SMPD4-220ENST00000491319 LINS1Q8NG48 757 aa20.06■□□□□ 0.8
SMPD4-220ENST00000491319 AKAP11Q9UKA4 1901 aa20.06■□□□□ 0.8
SMPD4-220ENST00000491319 F6X3S4 739 aa20.05■□□□□ 0.8
SMPD4-220ENST00000491319 IGHMBP2P38935 993 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms