RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PI4KAP1Q8N8J0 262 aa25.31■■□□□ 1.64
SREBF1-216ENST00000490796 DPF2Q92785 391 aa25.31■■□□□ 1.64
SREBF1-216ENST00000490796 GGA1Q9UJY5 639 aa25.31■■□□□ 1.64
SREBF1-216ENST00000490796 ZBTB12Q9Y330 459 aaPredicted RBP25.31■■□□□ 1.64
SREBF1-216ENST00000490796 UFL1O94874 794 aa25.3■■□□□ 1.64
SREBF1-216ENST00000490796 CELF2O95319 508 aaKnown RBP25.3■■□□□ 1.64
SREBF1-216ENST00000490796 ANKRD18AQ8IVF6 992 aa25.3■■□□□ 1.64
SREBF1-216ENST00000490796 TRPM4Q8TD43 1214 aa25.3■■□□□ 1.64
SREBF1-216ENST00000490796 GLIS2Q9BZE0 524 aaPredicted RBP25.3■■□□□ 1.64
SREBF1-216ENST00000490796 WBP1LQ9NX94 342 aa25.3■■□□□ 1.64
SREBF1-216ENST00000490796 RPS12P25398 132 aaKnown RBP25.29■■□□□ 1.64
SREBF1-216ENST00000490796 CST9Q5W186 159 aa25.29■■□□□ 1.64
SREBF1-216ENST00000490796 CDC37L1Q7L3B6 337 aa25.29■■□□□ 1.64
SREBF1-216ENST00000490796 CAPNS2Q96L46 248 aa25.29■■□□□ 1.64
SREBF1-216ENST00000490796 GPR101Q96P66 508 aaPredicted RBP25.29■■□□□ 1.64
SREBF1-216ENST00000490796 PODXL2Q9NZ53 605 aa25.29■■□□□ 1.64
SREBF1-216ENST00000490796 CDC5LQ99459 802 aaKnown RBP25.28■■□□□ 1.64
SREBF1-216ENST00000490796 BEGAINQ9BUH8 593 aa25.28■■□□□ 1.64
SREBF1-216ENST00000490796 ZNF408Q9H9D4 720 aa25.28■■□□□ 1.64
SREBF1-216ENST00000490796 PRDM10Q9NQV6 1147 aa25.28■■□□□ 1.64
SREBF1-216ENST00000490796 PGAP2Q9UHJ9 254 aa25.28■■□□□ 1.64
SREBF1-216ENST00000490796 TLL2Q9Y6L7 1015 aa25.28■■□□□ 1.64
SREBF1-216ENST00000490796 IL16Q14005 1332 aa25.28■■□□□ 1.64
SREBF1-216ENST00000490796 SLC4A2P04920 1241 aa25.27■■□□□ 1.64
SREBF1-216ENST00000490796 HIRAP54198 1017 aaPredicted RBP25.27■■□□□ 1.64
SREBF1-216ENST00000490796 TRPM7Q96QT4 1865 aa25.27■■□□□ 1.64
SREBF1-216ENST00000490796 SHTN1A0MZ66 631 aa25.26■■□□□ 1.63
SREBF1-216ENST00000490796 CTSWP56202 376 aa25.26■■□□□ 1.63
SREBF1-216ENST00000490796 CYP4F22Q6NT55 531 aa25.26■■□□□ 1.63
SREBF1-216ENST00000490796 SALL2Q9Y467 1007 aaPredicted RBP25.26■■□□□ 1.63
SREBF1-216ENST00000490796 TBC1D10BQ4KMP7 808 aaPredicted RBP25.25■■□□□ 1.63
SREBF1-216ENST00000490796 RBM26Q5T8P6 1007 aaKnown RBP25.25■■□□□ 1.63
SREBF1-216ENST00000490796 SAMD7Q7Z3H4 446 aa25.25■■□□□ 1.63
SREBF1-216ENST00000490796 XDHP47989 1333 aa25.25■■□□□ 1.63
SREBF1-216ENST00000490796 ZNF316A6NFI3 1004 aaPredicted RBP25.24■■□□□ 1.63
SREBF1-216ENST00000490796 IGKV5-2P06315 115 aa25.24■■□□□ 1.63
SREBF1-216ENST00000490796 LBX1P52954 281 aa25.24■■□□□ 1.63
SREBF1-216ENST00000490796 NCBP3Q53F19 620 aaKnown RBP25.24■■□□□ 1.63
SREBF1-216ENST00000490796 KCNQ5Q9NR82 932 aa25.24■■□□□ 1.63
SREBF1-216ENST00000490796 COL4A1P02462 1669 aa25.23■■□□□ 1.63
SREBF1-216ENST00000490796 ATP2B4P23634 1241 aa25.23■■□□□ 1.63
SREBF1-216ENST00000490796 USP48Q86UV5 1035 aa25.23■■□□□ 1.63
SREBF1-216ENST00000490796 CWF19L2Q2TBE0 894 aaKnown RBP25.22■■□□□ 1.63
SREBF1-216ENST00000490796 SAPCD2Q86UD0 394 aa25.22■■□□□ 1.63
SREBF1-216ENST00000490796 DCPSQ96C86 337 aaKnown RBP25.22■■□□□ 1.63
SREBF1-216ENST00000490796 RTL9Q8NET4 1388 aa25.21■■□□□ 1.63
SREBF1-216ENST00000490796 NEURL1BA8MQ27 555 aa25.21■■□□□ 1.63
SREBF1-216ENST00000490796 FKBP5Q13451 457 aaPredicted RBP25.21■■□□□ 1.63
SREBF1-216ENST00000490796 G2E3Q7L622 706 aa25.21■■□□□ 1.63
SREBF1-216ENST00000490796 KRT26Q7Z3Y9 468 aa25.21■■□□□ 1.63
SREBF1-216ENST00000490796 VIL1P09327 827 aaKnown RBP25.2■■□□□ 1.62
SREBF1-216ENST00000490796 FLIIQ13045 1269 aa25.2■■□□□ 1.62
SREBF1-216ENST00000490796 UBE3BQ7Z3V4 1068 aa25.2■■□□□ 1.62
SREBF1-216ENST00000490796 TTLL11Q8NHH1 800 aa25.2■■□□□ 1.62
SREBF1-216ENST00000490796 MYH16Q9H6N6 1097 aa25.2■■□□□ 1.62
SREBF1-216ENST00000490796 FANCIQ9NVI1 1328 aa25.19■■□□□ 1.62
SREBF1-216ENST00000490796 MAP2K2P36507 400 aa25.19■■□□□ 1.62
SREBF1-216ENST00000490796 WDR63Q8IWG1 891 aa25.19■■□□□ 1.62
SREBF1-216ENST00000490796 GREM2Q9H772 168 aa25.19■■□□□ 1.62
SREBF1-216ENST00000490796 HSPA8P11142 646 aaKnown RBP25.18■■□□□ 1.62
SREBF1-216ENST00000490796 IGHMBP2P38935 993 aaKnown RBP25.18■■□□□ 1.62
SREBF1-216ENST00000490796 KIF4BQ2VIQ3 1234 aa25.18■■□□□ 1.62
SREBF1-216ENST00000490796 HHIPL1Q96JK4 782 aa25.18■■□□□ 1.62
SREBF1-216ENST00000490796 BSDC1Q9NW68 430 aaPredicted RBP25.18■■□□□ 1.62
SREBF1-216ENST00000490796 AOC2O75106 756 aa25.17■■□□□ 1.62
SREBF1-216ENST00000490796 RSBN1LQ6PCB5 846 aaPredicted RBP25.17■■□□□ 1.62
SREBF1-216ENST00000490796 DNAAF4Q8WXU2 420 aa25.17■■□□□ 1.62
SREBF1-216ENST00000490796 H7C1W4 665 aa25.16■■□□□ 1.62
SREBF1-216ENST00000490796 GCKRQ14397 625 aa25.16■■□□□ 1.62
SREBF1-216ENST00000490796 PODNQ7Z5L7 613 aa25.16■■□□□ 1.62
SREBF1-216ENST00000490796 SULF1Q8IWU6 871 aa25.16■■□□□ 1.62
SREBF1-216ENST00000490796 AGBL3Q8NEM8 1001 aa25.16■■□□□ 1.62
SREBF1-216ENST00000490796 EGFRP00533 1210 aa25.15■■□□□ 1.62
SREBF1-216ENST00000490796 HUNKP57058 714 aa25.15■■□□□ 1.62
SREBF1-216ENST00000490796 MINPP1Q9UNW1 487 aa25.15■■□□□ 1.62
SREBF1-216ENST00000490796 USP17L3A6NCW0 530 aa25.14■■□□□ 1.62
SREBF1-216ENST00000490796 USP17L4A6NCW7 530 aa25.14■■□□□ 1.62
SREBF1-216ENST00000490796 EXOSC9Q06265 439 aaKnown RBP25.14■■□□□ 1.62
SREBF1-216ENST00000490796 USP17L1Q7RTZ2 530 aa25.14■■□□□ 1.62
SREBF1-216ENST00000490796 C2orf69Q8N8R5 385 aa25.14■■□□□ 1.62
SREBF1-216ENST00000490796 LINS1Q8NG48 757 aa25.14■■□□□ 1.62
SREBF1-216ENST00000490796 MPHOSPH8Q99549 860 aa25.14■■□□□ 1.62
SREBF1-216ENST00000490796 VAMP4O75379 141 aa25.13■■□□□ 1.61
SREBF1-216ENST00000490796 CCT4P50991 539 aaKnown RBP25.13■■□□□ 1.61
SREBF1-216ENST00000490796 GGA3Q9NZ52 723 aa25.13■■□□□ 1.61
SREBF1-216ENST00000490796 ADM5C9JUS6 153 aa25.12■■□□□ 1.61
SREBF1-216ENST00000490796 USP17L8P0C7I0 530 aa25.12■■□□□ 1.61
SREBF1-216ENST00000490796 ITGA6P23229 1130 aa25.12■■□□□ 1.61
SREBF1-216ENST00000490796 FAM9BQ8IZU0 186 aa25.12■■□□□ 1.61
SREBF1-216ENST00000490796 FBXW7Q969H0 707 aa25.12■■□□□ 1.61
SREBF1-216ENST00000490796 GBA2Q9HCG7 927 aaPredicted RBP25.12■■□□□ 1.61
SREBF1-216ENST00000490796 MYH3P11055 1940 aa25.12■■□□□ 1.61
SREBF1-216ENST00000490796 SCN9AQ15858 1988 aa25.11■■□□□ 1.61
SREBF1-216ENST00000490796 MED23Q9ULK4 1368 aa25.11■■□□□ 1.61
SREBF1-216ENST00000490796 DLK2Q6UY11 383 aa25.11■■□□□ 1.61
SREBF1-216ENST00000490796 PLA2G12BQ9BX93 195 aa25.11■■□□□ 1.61
SREBF1-216ENST00000490796 ANKRD2Q9GZV1 360 aa25.11■■□□□ 1.61
SREBF1-216ENST00000490796 LEMD3Q9Y2U8 911 aa25.11■■□□□ 1.61
SREBF1-216ENST00000490796 CA12O43570 354 aa25.1■■□□□ 1.61
SREBF1-216ENST00000490796 KCNJ4P48050 445 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms