RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 FMNL2Q96PY5 1086 aa12.12□□□□□ -0.47
SRRM1-217ENST00000490543 HACL1Q9UJ83 578 aa12.12□□□□□ -0.47
SRRM1-217ENST00000490543 TSR3Q9UJK0 312 aaKnown RBP12.12□□□□□ -0.47
SRRM1-217ENST00000490543 SCN4AP35499 1836 aa12.11□□□□□ -0.47
SRRM1-217ENST00000490543 EPHX2P34913 555 aa12.11□□□□□ -0.47
SRRM1-217ENST00000490543 FKBP4Q02790 459 aaKnown RBP eCLIP12.11□□□□□ -0.47
SRRM1-217ENST00000490543 DEFB115Q30KQ5 88 aa12.11□□□□□ -0.47
SRRM1-217ENST00000490543 CCDC93Q567U6 631 aa12.11□□□□□ -0.47
SRRM1-217ENST00000490543 CC2D1BQ5T0F9 858 aaKnown RBP12.11□□□□□ -0.47
SRRM1-217ENST00000490543 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
SRRM1-217ENST00000490543 NPM2Q86SE8 214 aaKnown RBP12.11□□□□□ -0.47
SRRM1-217ENST00000490543 NBPF5PQ86XG9 351 aaPredicted RBP12.11□□□□□ -0.47
SRRM1-217ENST00000490543 CNTROBQ8N137 903 aa12.11□□□□□ -0.47
SRRM1-217ENST00000490543 PCGF6Q9BYE7 350 aa12.11□□□□□ -0.47
SRRM1-217ENST00000490543 RNF123Q5XPI4 1314 aa12.11□□□□□ -0.47
SRRM1-217ENST00000490543 KLRG2A4D1S0 409 aaPredicted RBP12.1□□□□□ -0.47
SRRM1-217ENST00000490543 RASSF10A6NK89 507 aa12.1□□□□□ -0.47
SRRM1-217ENST00000490543 U2SURPO15042 1029 aaKnown RBP12.1□□□□□ -0.47
SRRM1-217ENST00000490543 PER1O15534 1290 aaPredicted RBP12.1□□□□□ -0.47
SRRM1-217ENST00000490543 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
SRRM1-217ENST00000490543 NPR1P16066 1061 aa12.1□□□□□ -0.47
SRRM1-217ENST00000490543 ABHD8Q96I13 439 aa12.1□□□□□ -0.47
SRRM1-217ENST00000490543 PHACTR3Q96KR7 559 aa12.1□□□□□ -0.47
SRRM1-217ENST00000490543 FAM177BA6PVY3 158 aa12.09□□□□□ -0.47
SRRM1-217ENST00000490543 BTBD11A6QL63 1104 aa12.09□□□□□ -0.47
SRRM1-217ENST00000490543 FZD9O00144 591 aa12.09□□□□□ -0.47
SRRM1-217ENST00000490543 FMR1Q06787 632 aaKnown RBP eCLIP12.09□□□□□ -0.47
SRRM1-217ENST00000490543 CLEC4GQ6UXB4 293 aa12.09□□□□□ -0.47
SRRM1-217ENST00000490543 SYNE4Q8N205 404 aa12.09□□□□□ -0.47
SRRM1-217ENST00000490543 GAS2L2Q8NHY3 880 aa12.09□□□□□ -0.47
SRRM1-217ENST00000490543 SIPA1L3O60292 1781 aaPredicted RBP12.09□□□□□ -0.47
SRRM1-217ENST00000490543 ARFGEF2Q9Y6D5 1785 aa12.09□□□□□ -0.47
SRRM1-217ENST00000490543 WDR33Q9C0J8 1336 aaKnown RBP12.09□□□□□ -0.47
SRRM1-217ENST00000490543 CEMIPQ8WUJ3 1361 aa12.08□□□□□ -0.48
SRRM1-217ENST00000490543 ADAMTSL1Q8N6G6 1762 aa12.08□□□□□ -0.48
SRRM1-217ENST00000490543 IARSP41252 1262 aaKnown RBP12.08□□□□□ -0.48
SRRM1-217ENST00000490543 CNGB1Q14028 1251 aaPredicted RBP12.08□□□□□ -0.48
SRRM1-217ENST00000490543 FAM161AQ3B820 660 aa12.08□□□□□ -0.48
SRRM1-217ENST00000490543 NBPF10Q6P3W6 841 aaKnown RBP12.08□□□□□ -0.48
SRRM1-217ENST00000490543 PNMA8AQ86V59 439 aaPredicted RBP12.08□□□□□ -0.48
SRRM1-217ENST00000490543 NBPF15Q8N660 670 aa12.08□□□□□ -0.48
SRRM1-217ENST00000490543 KIF7Q2M1P5 1343 aa12.08□□□□□ -0.48
SRRM1-217ENST00000490543 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.48
SRRM1-217ENST00000490543 RBM26Q5T8P6 1007 aaKnown RBP12.07□□□□□ -0.48
SRRM1-217ENST00000490543 TPTE2Q6XPS3 522 aa12.07□□□□□ -0.48
SRRM1-217ENST00000490543 RTKN2Q8IZC4 609 aa12.07□□□□□ -0.48
SRRM1-217ENST00000490543 ABT1Q9ULW3 272 aaKnown RBP12.07□□□□□ -0.48
SRRM1-217ENST00000490543 NIP7Q9Y221 180 aaKnown RBP eCLIP12.07□□□□□ -0.48
SRRM1-217ENST00000490543 BCORQ6W2J9 1755 aa12.07□□□□□ -0.48
SRRM1-217ENST00000490543 CLSPNQ9HAW4 1339 aa12.07□□□□□ -0.48
SRRM1-217ENST00000490543 PPP4CP60510 307 aa12.06□□□□□ -0.48
SRRM1-217ENST00000490543 HLFQ16534 295 aa12.06□□□□□ -0.48
SRRM1-217ENST00000490543 SMYD5Q6GMV2 418 aa12.06□□□□□ -0.48
SRRM1-217ENST00000490543 SLC51AQ86UW1 340 aa12.06□□□□□ -0.48
SRRM1-217ENST00000490543 GPC2Q8N158 579 aa12.06□□□□□ -0.48
SRRM1-217ENST00000490543 DDX21Q9NR30 783 aaKnown RBP eCLIP12.06□□□□□ -0.48
SRRM1-217ENST00000490543 SNRPA1P09661 255 aaKnown RBP12.05□□□□□ -0.48
SRRM1-217ENST00000490543 MAP2K1Q02750 393 aaPredicted RBP12.05□□□□□ -0.48
SRRM1-217ENST00000490543 ZNF652Q9Y2D9 606 aa12.05□□□□□ -0.48
SRRM1-217ENST00000490543 GJA3Q9Y6H8 435 aa12.05□□□□□ -0.48
SRRM1-217ENST00000490543 COL4A5P29400 1685 aa12.05□□□□□ -0.48
SRRM1-217ENST00000490543 SNED1Q8TER0 1413 aa12.04□□□□□ -0.48
SRRM1-217ENST00000490543 ALDH1B1P30837 517 aa12.04□□□□□ -0.48
SRRM1-217ENST00000490543 PRKAR2BP31323 418 aa12.04□□□□□ -0.48
SRRM1-217ENST00000490543 EPS15P42566 896 aa12.04□□□□□ -0.48
SRRM1-217ENST00000490543 GRM1Q13255 1194 aa12.04□□□□□ -0.48
SRRM1-217ENST00000490543 CYP4F22Q6NT55 531 aa12.04□□□□□ -0.48
SRRM1-217ENST00000490543 MCM10Q7L590 875 aa12.04□□□□□ -0.48
SRRM1-217ENST00000490543 JDP2Q8WYK2 163 aa12.04□□□□□ -0.48
SRRM1-217ENST00000490543 CAPNS2Q96L46 248 aa12.04□□□□□ -0.48
SRRM1-217ENST00000490543 CCDC85CA6NKD9 419 aa12.03□□□□□ -0.48
SRRM1-217ENST00000490543 TRAF5O00463 557 aa12.03□□□□□ -0.48
SRRM1-217ENST00000490543 SCNN1DP51172 638 aa12.03□□□□□ -0.48
SRRM1-217ENST00000490543 DCTN1Q14203 1278 aa12.03□□□□□ -0.48
SRRM1-217ENST00000490543 CST9Q5W186 159 aa12.03□□□□□ -0.48
SRRM1-217ENST00000490543 NUTM1Q86Y26 1132 aa12.03□□□□□ -0.48
SRRM1-217ENST00000490543 PSMD1Q99460 953 aa12.03□□□□□ -0.48
SRRM1-217ENST00000490543 RSPH6AQ9H0K4 717 aa12.03□□□□□ -0.48
SRRM1-217ENST00000490543 LTBP1Q14766 1721 aa12.03□□□□□ -0.48
SRRM1-217ENST00000490543 RNF40O75150 1001 aa12.02□□□□□ -0.49
SRRM1-217ENST00000490543 GTF2E1P29083 439 aaPredicted RBP12.02□□□□□ -0.49
SRRM1-217ENST00000490543 EIF6P56537 245 aaKnown RBP12.02□□□□□ -0.49
SRRM1-217ENST00000490543 CRY2Q49AN0 593 aa12.02□□□□□ -0.49
SRRM1-217ENST00000490543 SWT1Q5T5J6 900 aaKnown RBP12.02□□□□□ -0.49
SRRM1-217ENST00000490543 GPR101Q96P66 508 aaPredicted RBP12.02□□□□□ -0.49
SRRM1-217ENST00000490543 ADGRG1Q9Y653 693 aa12.02□□□□□ -0.49
SRRM1-217ENST00000490543 ABCC12Q96J65 1359 aa12.02□□□□□ -0.49
SRRM1-217ENST00000490543 TCERG1O14776 1098 aaKnown RBP12.01□□□□□ -0.49
SRRM1-217ENST00000490543 AOC2O75106 756 aa12.01□□□□□ -0.49
SRRM1-217ENST00000490543 NGEFQ8N5V2 710 aa12.01□□□□□ -0.49
SRRM1-217ENST00000490543 MIS18AQ9NYP9 233 aa12.01□□□□□ -0.49
SRRM1-217ENST00000490543 LMOD1P29536 600 aaPredicted RBP12□□□□□ -0.49
SRRM1-217ENST00000490543 RGS19P49795 217 aa12□□□□□ -0.49
SRRM1-217ENST00000490543 MLLT1Q03111 559 aaPredicted RBP12□□□□□ -0.49
SRRM1-217ENST00000490543 LARGE2Q8N3Y3 721 aa12□□□□□ -0.49
SRRM1-217ENST00000490543 HOXA10P31260 410 aaPredicted RBP11.99□□□□□ -0.49
SRRM1-217ENST00000490543 ECE1P42892 770 aa11.99□□□□□ -0.49
SRRM1-217ENST00000490543 CC2D2BQ6DHV5 1058 aa11.99□□□□□ -0.49
SRRM1-217ENST00000490543 RTF1Q92541 710 aaKnown RBP11.99□□□□□ -0.49
SRRM1-217ENST00000490543 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms