RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 RTKN2Q8IZC4 609 aa9.88□□□□□ -0.83
PDLIM1-203ENST00000490391 VSIG10Q8N0Z9 540 aa9.88□□□□□ -0.83
PDLIM1-203ENST00000490391 SYNE4Q8N205 404 aa9.88□□□□□ -0.83
PDLIM1-203ENST00000490391 SLC52A2Q9HAB3 445 aa9.88□□□□□ -0.83
PDLIM1-203ENST00000490391 GJA3Q9Y6H8 435 aa9.88□□□□□ -0.83
PDLIM1-203ENST00000490391 A0A087WZG4 1122 aa9.87□□□□□ -0.83
PDLIM1-203ENST00000490391 FAM155AB1AL88 458 aaPredicted RBP9.87□□□□□ -0.83
PDLIM1-203ENST00000490391 SLC24A1O60721 1099 aa9.87□□□□□ -0.83
PDLIM1-203ENST00000490391 NPR1P16066 1061 aa9.87□□□□□ -0.83
PDLIM1-203ENST00000490391 ST5P78524 1137 aa9.87□□□□□ -0.83
PDLIM1-203ENST00000490391 TJAP1Q5JTD0 557 aa9.87□□□□□ -0.83
PDLIM1-203ENST00000490391 CTU1Q7Z7A3 348 aaKnown RBP9.87□□□□□ -0.83
PDLIM1-203ENST00000490391 PSMD1Q99460 953 aa9.87□□□□□ -0.83
PDLIM1-203ENST00000490391 GLIS2Q9BZE0 524 aaPredicted RBP9.87□□□□□ -0.83
PDLIM1-203ENST00000490391 TBC1D2BQ9UPU7 963 aa9.87□□□□□ -0.83
PDLIM1-203ENST00000490391 CAMTA2O94983 1202 aa9.86□□□□□ -0.83
PDLIM1-203ENST00000490391 PPP1R18Q6NYC8 613 aa9.86□□□□□ -0.83
PDLIM1-203ENST00000490391 HS6ST3Q8IZP7 471 aa9.86□□□□□ -0.83
PDLIM1-203ENST00000490391 JDP2Q8WYK2 163 aa9.86□□□□□ -0.83
PDLIM1-203ENST00000490391 LGR6Q9HBX8 967 aa9.86□□□□□ -0.83
PDLIM1-203ENST00000490391 PGAP2Q9UHJ9 254 aa9.86□□□□□ -0.83
PDLIM1-203ENST00000490391 LAMA3Q16787 3333 aa9.86□□□□□ -0.83
PDLIM1-203ENST00000490391 AKAP11Q9UKA4 1901 aa9.86□□□□□ -0.83
PDLIM1-203ENST00000490391 EIF6P56537 245 aaKnown RBP9.85□□□□□ -0.83
PDLIM1-203ENST00000490391 SETDB2Q96T68 719 aa9.85□□□□□ -0.83
PDLIM1-203ENST00000490391 ADARB2Q9NS39 739 aaKnown RBP9.85□□□□□ -0.83
PDLIM1-203ENST00000490391 RNF186Q9NXI6 227 aa9.85□□□□□ -0.83
PDLIM1-203ENST00000490391 TRIM6-TRIM34B2RNG4 842 aa9.84□□□□□ -0.83
PDLIM1-203ENST00000490391 TRPA1O75762 1119 aa9.84□□□□□ -0.83
PDLIM1-203ENST00000490391 HUNKP57058 714 aa9.84□□□□□ -0.83
PDLIM1-203ENST00000490391 GPRC5DQ9NZD1 345 aa9.84□□□□□ -0.83
PDLIM1-203ENST00000490391 UNC80Q8N2C7 3258 aa9.84□□□□□ -0.83
PDLIM1-203ENST00000490391 STARD3NLO95772 234 aa9.83□□□□□ -0.84
PDLIM1-203ENST00000490391 IL6STP40189 918 aaPredicted RBP9.83□□□□□ -0.84
PDLIM1-203ENST00000490391 KIF23Q02241 960 aaPredicted RBP9.83□□□□□ -0.84
PDLIM1-203ENST00000490391 AKAP4Q5JQC9 854 aa9.83□□□□□ -0.84
PDLIM1-203ENST00000490391 DLL1O00548 723 aa9.82□□□□□ -0.84
PDLIM1-203ENST00000490391 NPHP1O15259 732 aa9.82□□□□□ -0.84
PDLIM1-203ENST00000490391 RNMTO43148 476 aaKnown RBP9.82□□□□□ -0.84
PDLIM1-203ENST00000490391 HIRAP54198 1017 aaPredicted RBP9.82□□□□□ -0.84
PDLIM1-203ENST00000490391 PPP4CP60510 307 aa9.82□□□□□ -0.84
PDLIM1-203ENST00000490391 SLC51AQ86UW1 340 aa9.82□□□□□ -0.84
PDLIM1-203ENST00000490391 NBPF5PQ86XG9 351 aaPredicted RBP9.82□□□□□ -0.84
PDLIM1-203ENST00000490391 ZNF408Q9H9D4 720 aa9.82□□□□□ -0.84
PDLIM1-203ENST00000490391 C6orf132Q5T0Z8 1188 aa9.81□□□□□ -0.84
PDLIM1-203ENST00000490391 SULT6B1Q6IMI4 303 aa9.81□□□□□ -0.84
PDLIM1-203ENST00000490391 RGMBQ6NW40 437 aa9.81□□□□□ -0.84
PDLIM1-203ENST00000490391 DLK2Q6UY11 383 aa9.81□□□□□ -0.84
PDLIM1-203ENST00000490391 LARGE2Q8N3Y3 721 aa9.81□□□□□ -0.84
PDLIM1-203ENST00000490391 ZC3H15Q8WU90 426 aaKnown RBP9.81□□□□□ -0.84
PDLIM1-203ENST00000490391 CSRNP1Q96S65 589 aa9.81□□□□□ -0.84
PDLIM1-203ENST00000490391 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.81□□□□□ -0.84
PDLIM1-203ENST00000490391 ZNF330Q9Y3S2 320 aaPredicted RBP9.81□□□□□ -0.84
PDLIM1-203ENST00000490391 HEG1Q9ULI3 1381 aa9.8□□□□□ -0.84
PDLIM1-203ENST00000490391 ALDH1B1P30837 517 aa9.8□□□□□ -0.84
PDLIM1-203ENST00000490391 TNNT2P45379 298 aaPredicted RBP9.8□□□□□ -0.84
PDLIM1-203ENST00000490391 PKN2Q16513 984 aaKnown RBP9.8□□□□□ -0.84
PDLIM1-203ENST00000490391 CDC37L1Q7L3B6 337 aa9.8□□□□□ -0.84
PDLIM1-203ENST00000490391 TRPM4Q8TD43 1214 aa9.8□□□□□ -0.84
PDLIM1-203ENST00000490391 ZNF496Q96IT1 587 aaPredicted RBP9.8□□□□□ -0.84
PDLIM1-203ENST00000490391 VCANP13611 3396 aa9.8□□□□□ -0.84
PDLIM1-203ENST00000490391 NPC1L1Q9UHC9 1359 aa9.79□□□□□ -0.84
PDLIM1-203ENST00000490391 CXCL9Q07325 125 aa9.79□□□□□ -0.84
PDLIM1-203ENST00000490391 CRY2Q49AN0 593 aa9.79□□□□□ -0.84
PDLIM1-203ENST00000490391 CC2D2BQ6DHV5 1058 aa9.79□□□□□ -0.84
PDLIM1-203ENST00000490391 CLEC4GQ6UXB4 293 aa9.79□□□□□ -0.84
PDLIM1-203ENST00000490391 CCDC102AQ96A19 550 aa9.79□□□□□ -0.84
PDLIM1-203ENST00000490391 IL21Q9HBE4 155 aa9.79□□□□□ -0.84
PDLIM1-203ENST00000490391 POLR2AP24928 1970 aaKnown RBP9.79□□□□□ -0.84
PDLIM1-203ENST00000490391 CDHR2Q9BYE9 1310 aa9.79□□□□□ -0.84
PDLIM1-203ENST00000490391 SPTBN5Q9NRC6 3674 aaKnown RBP9.78□□□□□ -0.84
PDLIM1-203ENST00000490391 A1BGP04217 495 aa9.78□□□□□ -0.84
PDLIM1-203ENST00000490391 SLC10A3P09131 477 aa9.78□□□□□ -0.84
PDLIM1-203ENST00000490391 GMPSP49915 693 aaPredicted RBP9.78□□□□□ -0.84
PDLIM1-203ENST00000490391 DZIP3Q86Y13 1208 aaKnown RBP9.78□□□□□ -0.84
PDLIM1-203ENST00000490391 DDX27Q96GQ7 796 aaKnown RBP9.78□□□□□ -0.84
PDLIM1-203ENST00000490391 MTRQ99707 1265 aa9.78□□□□□ -0.84
PDLIM1-203ENST00000490391 EMILIN3Q9NT22 766 aa9.78□□□□□ -0.84
PDLIM1-203ENST00000490391 SIPA1L3O60292 1781 aaPredicted RBP9.78□□□□□ -0.84
PDLIM1-203ENST00000490391 RBBP6Q7Z6E9 1792 aaKnown RBP9.78□□□□□ -0.84
PDLIM1-203ENST00000490391 ABCC12Q96J65 1359 aa9.77□□□□□ -0.84
PDLIM1-203ENST00000490391 RIC1Q4ADV7 1423 aa9.77□□□□□ -0.85
PDLIM1-203ENST00000490391 SHTN1A0MZ66 631 aa9.77□□□□□ -0.85
PDLIM1-203ENST00000490391 CDCA8Q53HL2 280 aa9.77□□□□□ -0.85
PDLIM1-203ENST00000490391 FBXO46Q6PJ61 603 aaPredicted RBP9.77□□□□□ -0.85
PDLIM1-203ENST00000490391 TPTE2Q6XPS3 522 aa9.77□□□□□ -0.85
PDLIM1-203ENST00000490391 USP48Q86UV5 1035 aa9.77□□□□□ -0.85
PDLIM1-203ENST00000490391 NIM1KQ8IY84 436 aa9.77□□□□□ -0.85
PDLIM1-203ENST00000490391 ZNF296Q8WUU4 475 aaPredicted RBP9.77□□□□□ -0.85
PDLIM1-203ENST00000490391 TEX13AQ9BXU3 409 aaPredicted RBP9.77□□□□□ -0.85
PDLIM1-203ENST00000490391 GBA2Q9HCG7 927 aaPredicted RBP9.77□□□□□ -0.85
PDLIM1-203ENST00000490391 RYDENQ9NUL5 291 aaKnown RBP9.77□□□□□ -0.85
PDLIM1-203ENST00000490391 HOXA10P31260 410 aaPredicted RBP9.76□□□□□ -0.85
PDLIM1-203ENST00000490391 IL13P35225 146 aa9.76□□□□□ -0.85
PDLIM1-203ENST00000490391 ZNF157P51786 506 aaPredicted RBP9.76□□□□□ -0.85
PDLIM1-203ENST00000490391 TTC5Q8N0Z6 440 aa9.76□□□□□ -0.85
PDLIM1-203ENST00000490391 EPAS1Q99814 870 aa9.76□□□□□ -0.85
PDLIM1-203ENST00000490391 LARP6Q9BRS8 491 aaKnown RBP9.76□□□□□ -0.85
PDLIM1-203ENST00000490391 PPIP5K2O43314 1243 aa9.75□□□□□ -0.85
PDLIM1-203ENST00000490391 GRIPAP1Q4V328 841 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms