RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ATP5DP30049 168 aa10.07□□□□□ -0.8
LSAMP-205ENST00000490035 TRIM47Q96LD4 638 aa10.07□□□□□ -0.8
LSAMP-205ENST00000490035 IMPG2Q9BZV3 1241 aa10.07□□□□□ -0.8
LSAMP-205ENST00000490035 GNA11P29992 359 aa10.07□□□□□ -0.8
LSAMP-205ENST00000490035 UBA5Q9GZZ9 404 aa10.07□□□□□ -0.8
LSAMP-205ENST00000490035 NOS1P29475 1434 aa10.07□□□□□ -0.8
LSAMP-205ENST00000490035 RTN1Q16799 776 aa10.07□□□□□ -0.8
LSAMP-205ENST00000490035 PBRM1Q86U86 1689 aa10.07□□□□□ -0.8
LSAMP-205ENST00000490035 KIF5AQ12840 1032 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 IQCDQ96DY2 449 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 IQCGQ9H095 443 aaKnown RBP10.06□□□□□ -0.8
LSAMP-205ENST00000490035 CEP83Q9Y592 693 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 CTAGE15A4D2H0 777 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 CTAGE8P0CG41 777 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 CTAGE6Q86UF2 777 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 CTAGE4Q8IX94 777 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 TIGD1Q96MW7 591 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 DNMT1P26358 1616 aaKnown RBP10.06□□□□□ -0.8
LSAMP-205ENST00000490035 STK11IPQ8N1F8 1099 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 MRPS27Q92552 414 aaKnown RBP10.06□□□□□ -0.8
LSAMP-205ENST00000490035 C16orf45Q96MC5 204 aaPredicted RBP10.06□□□□□ -0.8
LSAMP-205ENST00000490035 ANKRD13DQ6ZTN6 518 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 FERMT3Q86UX7 667 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 ANKRD44Q8N8A2 993 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 GABPB2Q8TAK5 448 aaPredicted RBP10.06□□□□□ -0.8
LSAMP-205ENST00000490035 PPP2R5BQ15173 497 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 GRM8O00222 908 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 RAPGEF3O95398 923 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 BCCIPQ9P287 314 aaKnown RBP eCLIP10.06□□□□□ -0.8
LSAMP-205ENST00000490035 GCC2Q8IWJ2 1684 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 MSH6P52701 1360 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 AKR1B10O60218 316 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 ZSCAN23Q3MJ62 389 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 RBM26Q5T8P6 1007 aaKnown RBP10.06□□□□□ -0.8
LSAMP-205ENST00000490035 GOLGA1Q92805 767 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 CSRNP2Q9H175 543 aa10.06□□□□□ -0.8
LSAMP-205ENST00000490035 PRC1O43663 620 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 ARID4AP29374 1257 aaPredicted RBP10.05□□□□□ -0.8
LSAMP-205ENST00000490035 A0A1W2PRG0 241 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 TCERG1LQ5VWI1 586 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 PPP1R14CQ8TAE6 165 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 C6orf50Q9HD87 102 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 GPATCH8Q9UKJ3 1502 aaKnown RBP10.05□□□□□ -0.8
LSAMP-205ENST00000490035 GNG11P61952 73 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 SPAG5Q96R06 1193 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 UHRF1BP1LA0JNW5 1464 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 TSPY3P0CV98 308 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 TSPY8P0CW00 308 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 ALDH3A1P30838 453 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 VWA3BQ502W6 1294 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.05□□□□□ -0.8
LSAMP-205ENST00000490035 LLPHQ9BRT6 129 aaKnown RBP10.05□□□□□ -0.8
LSAMP-205ENST00000490035 AMOTL2Q9Y2J4 779 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 AOX1Q06278 1338 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 ABCC1P33527 1531 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 MYO5CQ9NQX4 1742 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 CLCN1P35523 988 aa10.05□□□□□ -0.8
LSAMP-205ENST00000490035 RPL13P26373 211 aaKnown RBP10.04□□□□□ -0.8
LSAMP-205ENST00000490035 CNGA4Q8IV77 575 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 NPHP3Q7Z494 1330 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 ERICH4A6NGS2 130 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 SNX16P57768 344 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 A2MP01023 1474 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 ZC3H6P61129 1189 aaKnown RBP10.04□□□□□ -0.8
LSAMP-205ENST00000490035 AKAP4Q5JQC9 854 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 RNF187Q5TA31 235 aaPredicted RBP10.04□□□□□ -0.8
LSAMP-205ENST00000490035 CCDC110Q8TBZ0 833 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 CCDC8Q9H0W5 538 aaPredicted RBP10.04□□□□□ -0.8
LSAMP-205ENST00000490035 PTCD1O75127 700 aaKnown RBP10.04□□□□□ -0.8
LSAMP-205ENST00000490035 LMAN1P49257 510 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 TMEM87AQ8NBN3 555 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 RHPN1Q8TCX5 695 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 SLC26A6Q9BXS9 759 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 ZMYM3Q14202 1370 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 ESYT1Q9BSJ8 1104 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 ALG1Q9BT22 464 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 HAUS2Q9NVX0 235 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 KCNG1Q9UIX4 513 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 MAATS1Q7Z4T9 603 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 CCDC94Q9BW85 323 aaPredicted RBP10.04□□□□□ -0.8
LSAMP-205ENST00000490035 SSFA2P28290 1259 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 CCDC129Q6ZRS4 1044 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 ZNF804AQ7Z570 1209 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 SWAP70Q9UH65 585 aa10.04□□□□□ -0.8
LSAMP-205ENST00000490035 CKAP2LQ8IYA6 745 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 TMX3Q96JJ7 454 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 MTRF1LQ9UGC7 380 aaKnown RBP10.03□□□□□ -0.8
LSAMP-205ENST00000490035 MAST1Q9Y2H9 1570 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 CCT2P78371 535 aaKnown RBP10.03□□□□□ -0.8
LSAMP-205ENST00000490035 PRAG1Q86YV5 1406 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 KSR2Q6VAB6 950 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 NPC1L1Q9UHC9 1359 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 TRIM75PA6NK02 468 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 ATP8B2P98198 1209 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 HS2ST1Q7LGA3 356 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 TNRQ92752 1358 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 ABCC10Q5T3U5 1492 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 SYNCQ9H7C4 482 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 MTUS1Q9ULD2 1270 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 IDEP14735 1019 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms