RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 CNKSR1Q969H4 720 aa13.54□□□□□ -0.24
TFF3-203ENST00000489676 SYT17Q9BSW7 474 aa13.54□□□□□ -0.24
TFF3-203ENST00000489676 SIL1Q9H173 461 aa13.54□□□□□ -0.24
TFF3-203ENST00000489676 PPP4R2Q9NY27 417 aa13.54□□□□□ -0.24
TFF3-203ENST00000489676 EXOC6BQ9Y2D4 811 aa13.54□□□□□ -0.24
TFF3-203ENST00000489676 BBOX1O75936 387 aa13.53□□□□□ -0.24
TFF3-203ENST00000489676 IGHMBP2P38935 993 aaKnown RBP13.53□□□□□ -0.24
TFF3-203ENST00000489676 TAF7LQ5H9L4 462 aa13.53□□□□□ -0.24
TFF3-203ENST00000489676 LDHAL6AQ6ZMR3 332 aa13.53□□□□□ -0.24
TFF3-203ENST00000489676 TTLL6Q8N841 843 aa13.53□□□□□ -0.24
TFF3-203ENST00000489676 ZNF622Q969S3 477 aaKnown RBP eCLIP13.53□□□□□ -0.24
TFF3-203ENST00000489676 RWDD1Q9H446 243 aaPredicted RBP13.53□□□□□ -0.24
TFF3-203ENST00000489676 SURF6O75683 361 aaKnown RBP13.52□□□□□ -0.25
TFF3-203ENST00000489676 SASH1O94885 1247 aa13.52□□□□□ -0.25
TFF3-203ENST00000489676 PIM2Q9P1W9 311 aa13.52□□□□□ -0.25
TFF3-203ENST00000489676 MINPP1Q9UNW1 487 aa13.52□□□□□ -0.25
TFF3-203ENST00000489676 ATP6V0A2Q9Y487 856 aa13.52□□□□□ -0.25
TFF3-203ENST00000489676 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.52□□□□□ -0.25
TFF3-203ENST00000489676 ZNF609O15014 1411 aa13.52□□□□□ -0.25
TFF3-203ENST00000489676 FER1L6Q2WGJ9 1857 aa13.52□□□□□ -0.25
TFF3-203ENST00000489676 MROH5Q6ZUA9 1318 aa13.51□□□□□ -0.25
TFF3-203ENST00000489676 IL15P40933 162 aaPredicted RBP13.51□□□□□ -0.25
TFF3-203ENST00000489676 HSP90AB4PQ58FF6 505 aa13.51□□□□□ -0.25
TFF3-203ENST00000489676 IFFO2Q5TF58 517 aa13.51□□□□□ -0.25
TFF3-203ENST00000489676 OLFM4Q6UX06 510 aa13.51□□□□□ -0.25
TFF3-203ENST00000489676 ZNF784Q8NCA9 323 aaPredicted RBP13.51□□□□□ -0.25
TFF3-203ENST00000489676 MPHOSPH8Q99549 860 aa13.51□□□□□ -0.25
TFF3-203ENST00000489676 CNNM1Q9NRU3 951 aa13.51□□□□□ -0.25
TFF3-203ENST00000489676 CHRNDQ07001 517 aa13.5□□□□□ -0.25
TFF3-203ENST00000489676 B4GALNT3Q6L9W6 998 aa13.5□□□□□ -0.25
TFF3-203ENST00000489676 SP8Q8IXZ3 490 aa13.5□□□□□ -0.25
TFF3-203ENST00000489676 GCC1Q96CN9 775 aa13.5□□□□□ -0.25
TFF3-203ENST00000489676 GTF3C3Q9Y5Q9 886 aa13.5□□□□□ -0.25
TFF3-203ENST00000489676 RAB11FIP3O75154 756 aa13.49□□□□□ -0.25
TFF3-203ENST00000489676 G3BP1Q13283 466 aaKnown RBP eCLIP13.49□□□□□ -0.25
TFF3-203ENST00000489676 DALRD3Q5D0E6 543 aaKnown RBP13.49□□□□□ -0.25
TFF3-203ENST00000489676 KIF1BPQ96EK5 621 aa13.49□□□□□ -0.25
TFF3-203ENST00000489676 CCDC136Q96JN2 1154 aa13.49□□□□□ -0.25
TFF3-203ENST00000489676 PODXL2Q9NZ53 605 aa13.49□□□□□ -0.25
TFF3-203ENST00000489676 XDHP47989 1333 aa13.48□□□□□ -0.25
TFF3-203ENST00000489676 IRS2Q9Y4H2 1338 aa13.48□□□□□ -0.25
TFF3-203ENST00000489676 FGFR2P21802 821 aa13.48□□□□□ -0.25
TFF3-203ENST00000489676 GPSM2P81274 684 aa13.48□□□□□ -0.25
TFF3-203ENST00000489676 TFCP2Q12800 502 aa13.48□□□□□ -0.25
TFF3-203ENST00000489676 OS9Q13438 667 aaPredicted RBP13.48□□□□□ -0.25
TFF3-203ENST00000489676 METTL24Q5JXM2 366 aa13.48□□□□□ -0.25
TFF3-203ENST00000489676 CENPQQ7L2Z9 268 aaPredicted RBP13.48□□□□□ -0.25
TFF3-203ENST00000489676 ERC1Q8IUD2 1116 aa13.48□□□□□ -0.25
TFF3-203ENST00000489676 RHPN1Q8TCX5 695 aa13.48□□□□□ -0.25
TFF3-203ENST00000489676 C21orf2O43822 256 aa13.47□□□□□ -0.25
TFF3-203ENST00000489676 PDE8BO95263 885 aa13.47□□□□□ -0.25
TFF3-203ENST00000489676 NUCB1Q02818 461 aa13.47□□□□□ -0.25
TFF3-203ENST00000489676 CC2D2BQ6DHV5 1058 aa13.47□□□□□ -0.25
TFF3-203ENST00000489676 HELBQ8NG08 1087 aaPredicted RBP13.47□□□□□ -0.25
TFF3-203ENST00000489676 RTFDC1Q9BY42 306 aaPredicted RBP13.47□□□□□ -0.25
TFF3-203ENST00000489676 LRRCC1Q9C099 1032 aa13.47□□□□□ -0.25
TFF3-203ENST00000489676 ANKRD2Q9GZV1 360 aa13.47□□□□□ -0.25
TFF3-203ENST00000489676 GPR108Q9NPR9 543 aa13.47□□□□□ -0.25
TFF3-203ENST00000489676 WWC3Q9ULE0 1092 aa13.47□□□□□ -0.25
TFF3-203ENST00000489676 WTIPA6NIX2 430 aaPredicted RBP13.46□□□□□ -0.25
TFF3-203ENST00000489676 SNAP23O00161 211 aa13.46□□□□□ -0.25
TFF3-203ENST00000489676 TAF5LO75529 589 aa13.46□□□□□ -0.25
TFF3-203ENST00000489676 CCDC93Q567U6 631 aa13.46□□□□□ -0.25
TFF3-203ENST00000489676 TNNI3KQ59H18 835 aa13.46□□□□□ -0.25
TFF3-203ENST00000489676 IL1RAPL2Q9NP60 686 aa13.46□□□□□ -0.25
TFF3-203ENST00000489676 CEP126Q9P2H0 1117 aa13.46□□□□□ -0.25
TFF3-203ENST00000489676 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
TFF3-203ENST00000489676 FPGT-TNNI3KV9GXZ4 949 aa13.46□□□□□ -0.25
TFF3-203ENST00000489676 SALL3Q9BXA9 1300 aa13.45□□□□□ -0.26
TFF3-203ENST00000489676 COL4A5P29400 1685 aa13.45□□□□□ -0.26
TFF3-203ENST00000489676 APBB1O00213 710 aa13.45□□□□□ -0.26
TFF3-203ENST00000489676 NFKBIEO00221 500 aa13.45□□□□□ -0.26
TFF3-203ENST00000489676 SMARCA5O60264 1052 aaPredicted RBP13.45□□□□□ -0.26
TFF3-203ENST00000489676 YBX3P16989 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
TFF3-203ENST00000489676 C1QTNF8P60827 252 aa13.45□□□□□ -0.26
TFF3-203ENST00000489676 UBE4AQ14139 1066 aa13.45□□□□□ -0.26
TFF3-203ENST00000489676 PUM3Q15397 648 aaKnown RBP13.45□□□□□ -0.26
TFF3-203ENST00000489676 ATP2B3Q16720 1220 aa13.45□□□□□ -0.26
TFF3-203ENST00000489676 SOGA3Q5TF21 947 aa13.45□□□□□ -0.26
TFF3-203ENST00000489676 MPNDQ8N594 471 aa13.45□□□□□ -0.26
TFF3-203ENST00000489676 TBC1D16Q8TBP0 767 aa13.45□□□□□ -0.26
TFF3-203ENST00000489676 EAF2Q96CJ1 260 aaPredicted RBP13.45□□□□□ -0.26
TFF3-203ENST00000489676 POLLQ9UGP5 575 aa13.45□□□□□ -0.26
TFF3-203ENST00000489676 LEMD3Q9Y2U8 911 aa13.45□□□□□ -0.26
TFF3-203ENST00000489676 MED23Q9ULK4 1368 aa13.45□□□□□ -0.26
TFF3-203ENST00000489676 ZNF804BA4D1E1 1349 aa13.44□□□□□ -0.26
TFF3-203ENST00000489676 LTBP3Q9NS15 1303 aa13.44□□□□□ -0.26
TFF3-203ENST00000489676 ZNF646O15015 1829 aaPredicted RBP13.44□□□□□ -0.26
TFF3-203ENST00000489676 A0A1B0GUL7 405 aa13.44□□□□□ -0.26
TFF3-203ENST00000489676 KLRK1P26718 216 aa13.44□□□□□ -0.26
TFF3-203ENST00000489676 GRIPAP1Q4V328 841 aa13.44□□□□□ -0.26
TFF3-203ENST00000489676 DPP8Q6V1X1 898 aaPredicted RBP13.44□□□□□ -0.26
TFF3-203ENST00000489676 C15orf52Q6ZUT6 534 aaKnown RBP13.44□□□□□ -0.26
TFF3-203ENST00000489676 LPIN2Q92539 896 aa13.44□□□□□ -0.26
TFF3-203ENST00000489676 PSMD1Q99460 953 aa13.44□□□□□ -0.26
TFF3-203ENST00000489676 TLR7Q9NYK1 1049 aaKnown RBP13.44□□□□□ -0.26
TFF3-203ENST00000489676 ANKIB1Q9P2G1 1089 aa13.44□□□□□ -0.26
TFF3-203ENST00000489676 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
TFF3-203ENST00000489676 GGA1Q9UJY5 639 aa13.44□□□□□ -0.26
TFF3-203ENST00000489676 NSFL1CQ9UNZ2 370 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms